CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 18-AUG-21 7PHT  ***

Normal Mode Analysis for ID 2602161157312567838

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6516
mode 8 1.20 0.5785
mode 9 1.58 0.5598
mode 10 2.45 0.5982
mode 11 2.69 0.6428
mode 12 3.20 0.5595
mode 13 3.27 0.6087
mode 14 4.06 0.0246
mode 15 4.20 0.5070
mode 16 4.38 0.5647
mode 17 4.59 0.0359
mode 18 4.97 0.0100
mode 19 5.01 0.6099
mode 20 5.18 0.0053
mode 21 5.31 0.0217
mode 22 5.40 0.0631
mode 23 5.47 0.0120
mode 24 5.52 0.2673
mode 25 5.61 0.0105
mode 26 5.73 0.0297
mode 27 5.76 0.0579
mode 28 5.78 0.0127
mode 29 5.86 0.0205
mode 30 5.89 0.0181
mode 31 5.95 0.0930
mode 32 5.98 0.0530
mode 33 6.06 0.0301
mode 34 6.11 0.0274
mode 35 6.14 0.0130
mode 36 6.15 0.0204
mode 37 6.28 0.0145
mode 38 6.34 0.0139
mode 39 6.37 0.0210
mode 40 6.39 0.0128
mode 41 6.49 0.0186
mode 42 6.59 0.0383
mode 43 6.67 0.0536
mode 44 6.77 0.1394
mode 45 6.82 0.0352
mode 46 6.89 0.0289
mode 47 6.93 0.0323
mode 48 6.95 0.0088
mode 49 6.98 0.0239
mode 50 7.03 0.0631
mode 51 7.06 0.0348
mode 52 7.09 0.0264
mode 53 7.10 0.0211
mode 54 7.16 0.1408
mode 55 7.18 0.0447
mode 56 7.21 0.0197
mode 57 7.27 0.1817
mode 58 7.28 0.0726
mode 59 7.35 0.0823
mode 60 7.37 0.0212
mode 61 7.40 0.0153
mode 62 7.41 0.0143
mode 63 7.43 0.0504
mode 64 7.43 0.0311
mode 65 7.45 0.0352
mode 66 7.47 0.0207
mode 67 7.48 0.0189
mode 68 7.55 0.0368
mode 69 7.56 0.0107
mode 70 7.57 0.0352
mode 71 7.60 0.0664
mode 72 7.65 0.0192
mode 73 7.66 0.0060
mode 74 7.69 0.0668
mode 75 7.75 0.0239
mode 76 7.76 0.0307
mode 77 7.82 0.0158
mode 78 7.85 0.0666
mode 79 7.90 0.0419
mode 80 7.91 0.0219
mode 81 7.92 0.1340
mode 82 7.97 0.0919
mode 83 8.01 0.0124
mode 84 8.07 0.0313
mode 85 8.07 0.0386
mode 86 8.10 0.0360
mode 87 8.11 0.0356
mode 88 8.16 0.0099
mode 89 8.21 0.0408
mode 90 8.21 0.0642
mode 91 8.26 0.0237
mode 92 8.27 0.0242
mode 93 8.30 0.0532
mode 94 8.34 0.0216
mode 95 8.41 0.0138
mode 96 8.42 0.0213
mode 97 8.47 0.0354
mode 98 8.48 0.0103
mode 99 8.49 0.0304
mode 100 8.50 0.0717
mode 101 8.53 0.0575
mode 102 8.57 0.0133
mode 103 8.59 0.0816
mode 104 8.61 0.0466
mode 105 8.61 0.0303
mode 106 8.62 0.0508

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.