CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  SUGAR BINDING PROTEIN 10-JUL-21 7RDP  ***

CA strain for 2602161209512572589

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 112PRO 113 0.0093
PRO 113LEU 114 -0.0089
LEU 114ILE 115 0.0165
ILE 115VAL 116 0.0599
VAL 116PRO 117 -0.1218
PRO 117TYR 118 0.0292
TYR 118ASN 119 -0.0954
ASN 119LEU 120 -0.0375
LEU 120PRO 121 -0.0002
PRO 121LEU 122 -0.0300
LEU 122PRO 123 -0.0269
PRO 123GLY 124 0.0423
GLY 124GLY 125 -0.0098
GLY 125VAL 126 -0.0073
VAL 126VAL 127 -0.0979
VAL 127PRO 128 -0.0208
PRO 128ARG 129 0.0093
ARG 129MET 130 -0.0034
MET 130LEU 131 0.1188
LEU 131ILE 132 0.0182
ILE 132THR 133 0.0644
THR 133ILE 134 0.0801
ILE 134LEU 135 0.0033
LEU 135GLY 136 0.0847
GLY 136THR 137 0.0722
THR 137VAL 138 0.0223
VAL 138LYS 139 0.0343
LYS 139PRO 140 -0.0211
PRO 140ASN 141 0.0150
ASN 141ALA 142 -0.0312
ALA 142ASN 143 0.0049
ASN 143ASN 143 0.0017
ASN 143ARG 144 -0.0345
ARG 144ILE 145 -0.0240
ILE 145ALA 146 -0.1640
ALA 146LEU 147 -0.0628
LEU 147ASP 148 -0.1289
ASP 148PHE 149 -0.1032
PHE 149GLN 150 -0.0139
GLN 150ARG 151 -0.1064
ARG 151GLY 152 -0.0224
GLY 152ASN 153 0.1381
ASN 153ASP 154 0.0155
ASP 154VAL 155 -0.0786
VAL 155ALA 156 -0.0136
ALA 156PHE 157 0.0027
PHE 157HIS 158 -0.1255
HIS 158PHE 159 -0.1318
PHE 159ASN 160 -0.0220
ASN 160PRO 161 -0.1099
PRO 161ARG 162 -0.0021
ARG 162PHE 163 -0.1187
PHE 163ASN 164 0.0662
ASN 164GLU 165 -0.0683
GLU 165ASN 166 -0.0489
ASN 166ASN 166 0.0140
ASN 166ASN 167 -0.0126
ASN 167ARG 168 -0.0047
ARG 168ARG 169 0.0776
ARG 169VAL 170 -0.0524
VAL 170ILE 171 -0.0143
ILE 171VAL 172 -0.0767
VAL 172CYS 173 -0.1118
CYS 173ASN 174 -0.0244
ASN 174THR 175 -0.0444
THR 175LYS 176 0.0486
LYS 176LEU 177 -0.0802
LEU 177ASP 178 0.1076
ASP 178ASN 179 -0.0563
ASN 179ASN 180 0.0440
ASN 180TRP 181 -0.1033
TRP 181GLY 182 0.0812
GLY 182ARG 183 0.1101
ARG 183GLU 184 -0.0302
GLU 184GLU 185 -0.0613
GLU 185ARG 186 -0.0272
ARG 186GLN 187 -0.0097
GLN 187SER 188 0.0045
SER 188VAL 189 0.0206
VAL 189PHE 190 0.0286
PHE 190PRO 191 -0.0280
PRO 191PHE 192 0.0268
PHE 192GLU 193 0.0272
GLU 193GLU 193 -0.0309
GLU 193SER 194 0.0555
SER 194GLY 195 0.0181
GLY 195LYS 196 0.0516
LYS 196PRO 197 0.0317
PRO 197PHE 198 0.0284
PHE 198LYS 199 0.1691
LYS 199ILE 200 -0.0185
ILE 200GLN 201 0.1011
GLN 201VAL 202 0.0635
VAL 202LEU 203 0.0295
LEU 203VAL 204 0.0817
VAL 204GLU 205 -0.0007
GLU 205PRO 206 0.0388
PRO 206ASP 207 -0.0504
ASP 207HIS 208 0.0224
HIS 208PHE 209 0.0060
PHE 209LYS 210 0.0533
LYS 210VAL 211 0.0645
VAL 211ALA 212 0.0653
ALA 212VAL 213 0.1514
VAL 213ASN 214 -0.0138
ASN 214ASP 215 0.0427
ASP 215ALA 216 -0.0361
ALA 216HIS 217 0.1339
HIS 217LEU 218 0.0156
LEU 218LEU 219 0.0862
LEU 219GLN 220 0.0666
GLN 220TYR 221 0.0524
TYR 221ASN 222 0.0103
ASN 222ASN 222 -0.0043
ASN 222HIS 223 0.0039
HIS 223ARG 224 0.0709
ARG 224VAL 225 -0.1139
VAL 225LYS 226 0.0212
LYS 226LYS 227 -0.0208
LYS 227LEU 228 0.1123
LEU 228ASN 229 -0.0073
ASN 229GLU 230 0.0387
GLU 230ILE 231 -0.0292
ILE 231SER 232 0.0065
SER 232SER 232 0.0260
SER 232LYS 233 -0.0609
LYS 233LEU 234 -0.0188
LEU 234GLY 235 -0.0626
GLY 235ILE 236 -0.2038
ILE 236SER 237 0.0217
SER 237GLY 238 -0.1037
GLY 238ASP 239 -0.1128
ASP 239ILE 240 0.1319
ILE 240ASP 241 0.0188
ASP 241LEU 242 -0.0004
LEU 242THR 243 -0.0206
THR 243SER 244 0.0648
SER 244SER 244 -0.0053
SER 244ALA 245 0.0007
ALA 245SER 246 0.0335
SER 246TYR 247 0.0394
TYR 247THR 248 0.0229
THR 248MET 249 0.0131
MET 249MET 249 -0.0039
MET 249ILE 250 -0.0061

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.