CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 08-AUG-00 1FJK  ***

Normal Mode Analysis for ID 2602171858533019858

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5950
mode 8 1.84 0.4821
mode 9 1.93 0.6422
mode 10 3.35 0.6325
mode 11 3.53 0.6461
mode 12 4.89 0.5701
mode 13 5.66 0.6403
mode 14 6.40 0.6209
mode 15 7.26 0.6432
mode 16 7.69 0.6146
mode 17 8.60 0.6271
mode 18 9.44 0.6775
mode 19 10.92 0.7226
mode 20 11.65 0.5475
mode 21 12.31 0.4080
mode 22 12.42 0.6652
mode 23 13.47 0.5482
mode 24 14.79 0.5648
mode 25 15.21 0.6615
mode 26 15.85 0.5712
mode 27 16.06 0.1356
mode 28 16.70 0.5852
mode 29 17.62 0.4699
mode 30 18.28 0.5781
mode 31 18.87 0.5497
mode 32 19.52 0.4590
mode 33 19.98 0.3627
mode 34 20.62 0.3900
mode 35 20.88 0.5438
mode 36 21.33 0.4682
mode 37 22.21 0.3986
mode 38 22.54 0.2757
mode 39 23.33 0.4200
mode 40 24.32 0.3454
mode 41 24.48 0.3664
mode 42 24.66 0.3161
mode 43 25.23 0.5205
mode 44 25.64 0.5711
mode 45 26.20 0.2402
mode 46 26.58 0.4688
mode 47 26.83 0.3726
mode 48 27.54 0.4849
mode 49 27.73 0.3484
mode 50 28.13 0.5604
mode 51 28.50 0.3649
mode 52 28.63 0.2934
mode 53 28.75 0.5151
mode 54 29.15 0.5836
mode 55 29.63 0.4502
mode 56 29.70 0.5422
mode 57 29.83 0.3642
mode 58 30.18 0.2636
mode 59 30.54 0.2589
mode 60 30.74 0.3734
mode 61 30.83 0.3676
mode 62 31.00 0.3433
mode 63 31.34 0.3542
mode 64 31.58 0.3879
mode 65 31.90 0.2521
mode 66 31.95 0.1455
mode 67 32.27 0.4045
mode 68 32.47 0.5050
mode 69 32.52 0.2586
mode 70 32.61 0.3759
mode 71 32.85 0.3077
mode 72 33.09 0.3379
mode 73 33.20 0.4327
mode 74 33.31 0.5292
mode 75 33.57 0.5834
mode 76 33.68 0.4849
mode 77 34.14 0.4532
mode 78 34.24 0.2334
mode 79 34.51 0.5138
mode 80 34.67 0.3647
mode 81 34.79 0.4606
mode 82 35.07 0.3645
mode 83 35.12 0.1932
mode 84 35.23 0.2792
mode 85 35.39 0.3664
mode 86 35.57 0.3692
mode 87 35.66 0.3554
mode 88 35.71 0.2634
mode 89 35.82 0.5270
mode 90 35.87 0.4397
mode 91 36.10 0.3429
mode 92 36.14 0.4758
mode 93 36.30 0.4676
mode 94 36.47 0.2860
mode 95 36.54 0.4620
mode 96 36.64 0.4884
mode 97 36.73 0.3152
mode 98 36.75 0.1784
mode 99 36.89 0.4775
mode 100 37.19 0.4288
mode 101 37.37 0.3274
mode 102 37.46 0.3286
mode 103 37.47 0.3254
mode 104 37.53 0.2211
mode 105 37.82 0.2835
mode 106 37.85 0.4405

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.