CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 18-AUG-21 7PHT  ***

Normal Mode Analysis for ID 2602181200303222267

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5313
mode 8 1.14 0.4270
mode 9 1.49 0.5999
mode 10 1.91 0.2385
mode 11 2.48 0.5749
mode 12 3.29 0.2544
mode 13 3.46 0.6846
mode 14 3.82 0.4663
mode 15 4.35 0.7361
mode 16 4.57 0.4050
mode 17 5.12 0.3367
mode 18 5.43 0.5233
mode 19 5.51 0.4656
mode 20 5.58 0.3196
mode 21 6.09 0.3503
mode 22 6.43 0.2694
mode 23 6.70 0.2135
mode 24 7.23 0.4591
mode 25 7.35 0.4822
mode 26 7.68 0.2526
mode 27 7.95 0.4209
mode 28 8.22 0.5589
mode 29 8.74 0.4879
mode 30 9.00 0.5761
mode 31 9.09 0.5416
mode 32 9.30 0.1698
mode 33 9.73 0.5602
mode 34 9.91 0.5046
mode 35 10.12 0.5455
mode 36 10.22 0.5519
mode 37 10.46 0.3480
mode 38 10.48 0.3245
mode 39 10.50 0.4280
mode 40 10.67 0.3785
mode 41 10.88 0.4983
mode 42 11.02 0.1784
mode 43 11.10 0.4624
mode 44 11.21 0.4100
mode 45 11.33 0.5055
mode 46 11.60 0.5389
mode 47 11.64 0.5588
mode 48 11.87 0.5330
mode 49 11.99 0.3427
mode 50 12.13 0.4546
mode 51 12.22 0.3579
mode 52 12.27 0.3724
mode 53 12.31 0.4650
mode 54 12.44 0.3729
mode 55 12.53 0.6283
mode 56 12.67 0.3365
mode 57 12.85 0.5190
mode 58 12.97 0.6003
mode 59 13.12 0.5019
mode 60 13.20 0.3175
mode 61 13.27 0.3945
mode 62 13.30 0.4004
mode 63 13.31 0.5246
mode 64 13.46 0.4571
mode 65 13.53 0.5223
mode 66 13.57 0.3624
mode 67 13.69 0.3465
mode 68 13.72 0.4738
mode 69 13.87 0.4438
mode 70 13.92 0.4932
mode 71 13.97 0.4108
mode 72 14.05 0.4406
mode 73 14.17 0.3460
mode 74 14.22 0.4847
mode 75 14.23 0.3063
mode 76 14.30 0.1920
mode 77 14.37 0.4579
mode 78 14.48 0.4887
mode 79 14.53 0.4585
mode 80 14.54 0.4585
mode 81 14.59 0.4071
mode 82 14.65 0.3126
mode 83 14.68 0.3143
mode 84 14.72 0.5082
mode 85 14.85 0.5434
mode 86 14.87 0.5378
mode 87 14.94 0.4977
mode 88 14.97 0.4218
mode 89 15.04 0.6197
mode 90 15.09 0.5965
mode 91 15.13 0.5484
mode 92 15.20 0.3725
mode 93 15.21 0.5520
mode 94 15.32 0.4975
mode 95 15.34 0.4302
mode 96 15.37 0.3843
mode 97 15.42 0.4243
mode 98 15.48 0.1590
mode 99 15.56 0.5593
mode 100 15.60 0.4462
mode 101 15.65 0.5802
mode 102 15.74 0.2541
mode 103 15.79 0.3755
mode 104 15.86 0.3794
mode 105 15.88 0.4741
mode 106 15.98 0.2311

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.