CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSFERASE 18-AUG-21 7PHT  ***

Normal Mode Analysis for ID 2602181234513230839

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5685
mode 8 1.19 0.4636
mode 9 1.52 0.5667
mode 10 1.94 0.2362
mode 11 2.54 0.5985
mode 12 2.89 0.7177
mode 13 3.15 0.5098
mode 14 3.46 0.2254
mode 15 4.44 0.7292
mode 16 4.82 0.5372
mode 17 5.15 0.6273
mode 18 5.37 0.4532
mode 19 5.54 0.4746
mode 20 5.84 0.1882
mode 21 6.27 0.3751
mode 22 6.47 0.2770
mode 23 6.88 0.4011
mode 24 7.17 0.5301
mode 25 7.41 0.5483
mode 26 7.87 0.1616
mode 27 7.98 0.4987
mode 28 8.40 0.5575
mode 29 8.57 0.2130
mode 30 8.75 0.6286
mode 31 9.07 0.6793
mode 32 9.48 0.5659
mode 33 9.77 0.1729
mode 34 9.97 0.6135
mode 35 10.33 0.5135
mode 36 10.37 0.6587
mode 37 10.64 0.5105
mode 38 10.88 0.5238
mode 39 10.97 0.5077
mode 40 11.05 0.4358
mode 41 11.10 0.3319
mode 42 11.23 0.2784
mode 43 11.50 0.2570
mode 44 11.60 0.2326
mode 45 11.68 0.4373
mode 46 11.85 0.5946
mode 47 12.06 0.5957
mode 48 12.18 0.5472
mode 49 12.42 0.4011
mode 50 12.44 0.2030
mode 51 12.61 0.5522
mode 52 12.79 0.3878
mode 53 12.92 0.3563
mode 54 12.95 0.5003
mode 55 13.14 0.5621
mode 56 13.16 0.5770
mode 57 13.34 0.3982
mode 58 13.40 0.5967
mode 59 13.47 0.4455
mode 60 13.53 0.4981
mode 61 13.69 0.4251
mode 62 13.80 0.4417
mode 63 13.94 0.2006
mode 64 13.99 0.4954
mode 65 14.09 0.6024
mode 66 14.17 0.3025
mode 67 14.22 0.4519
mode 68 14.37 0.3737
mode 69 14.41 0.4838
mode 70 14.48 0.3476
mode 71 14.63 0.5319
mode 72 14.71 0.4336
mode 73 14.76 0.5347
mode 74 14.80 0.4960
mode 75 14.84 0.4789
mode 76 14.86 0.4752
mode 77 14.97 0.3678
mode 78 14.99 0.4586
mode 79 15.14 0.3395
mode 80 15.27 0.5120
mode 81 15.28 0.4741
mode 82 15.36 0.2875
mode 83 15.39 0.4734
mode 84 15.42 0.4174
mode 85 15.46 0.4550
mode 86 15.52 0.4084
mode 87 15.56 0.5076
mode 88 15.61 0.1741
mode 89 15.67 0.5187
mode 90 15.73 0.4664
mode 91 15.80 0.6251
mode 92 15.85 0.3851
mode 93 15.92 0.3938
mode 94 15.94 0.4739
mode 95 16.04 0.5296
mode 96 16.08 0.5259
mode 97 16.14 0.4031
mode 98 16.19 0.3060
mode 99 16.28 0.4561
mode 100 16.31 0.4253
mode 101 16.37 0.3564
mode 102 16.40 0.3229
mode 103 16.45 0.3108
mode 104 16.53 0.3979
mode 105 16.59 0.4498
mode 106 16.65 0.3357

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.