CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 08-AUG-00 1FJK  ***

CA strain for 2602181511213256513

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 1ASP 2 0.0126
ASP 2LYS 3 0.0130
LYS 3VAL 4 -0.0101
VAL 4GLN 5 0.0228
GLN 5TYR 6 0.0065
TYR 6LEU 7 -0.0062
LEU 7THR 8 0.0066
THR 8ARG 9 0.0317
ARG 9SER 10 0.0098
SER 10ALA 11 -0.0112
ALA 11ILE 12 0.0298
ILE 12ARG 13 0.0170
ARG 13ARG 14 -0.0205
ARG 14ALA 15 -0.0177
ALA 15SER 16 -0.0333
SER 16THR 17 0.0853
THR 17ILE 18 -0.0775
ILE 18GLU 19 0.0037
GLU 19MET 20 0.0827
MET 20PRO 21 -0.0054
PRO 21GLN 22 0.0073
GLN 22GLN 23 0.0146
GLN 23ALA 24 -0.0436
ALA 24ARG 25 -0.0328
ARG 25GLN 26 -0.0217
GLN 26ASN 27 0.0545
ASN 27LEU 28 0.0388
LEU 28GLN 29 -0.0363
GLN 29ASN 30 0.0312
ASN 30LEU 31 0.0210
LEU 31PHE 32 -0.0281
PHE 32ILE 33 0.0423
ILE 33ASN 34 0.0430
ASN 34PHE 35 -0.0603
PHE 35CYS 36 -0.0012
CYS 36LEU 37 0.0520
LEU 37ILE 38 -0.0353
ILE 38LEU 39 -0.0456
LEU 39ILE 40 0.0394
ILE 40PHE 41 0.0341
PHE 41LEU 42 -0.0304
LEU 42LEU 43 0.0241
LEU 43LEU 44 0.0010
LEU 44ILE 45 0.0271
ILE 45CYS 46 -0.0253
CYS 46ILE 47 0.0210
ILE 47ILE 48 0.0296
ILE 48VAL 49 -0.0078
VAL 49MET 50 -0.0036
MET 50LEU 51 0.0271
LEU 51LEU 52 -0.0046

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.