CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 08-AUG-00 1FJK  ***

CA distance fluctuations for 2602182328173341067

---  normal mode 11  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
LEU 31 0.20 MET 1 -0.04 ALA 11
ASN 30 0.08 ASP 2 -0.04 LEU 52
ASN 30 0.15 LYS 3 -0.06 ARG 14
LEU 31 0.28 VAL 4 -0.06 ARG 14
ARG 25 0.10 GLN 5 -0.11 LEU 52
ALA 11 0.04 TYR 6 -0.15 VAL 49
ASN 30 0.16 LEU 7 -0.10 ARG 14
LEU 28 0.21 THR 8 -0.09 ALA 11
GLN 5 0.06 ARG 9 -0.18 VAL 49
TYR 6 0.03 SER 10 -0.13 VAL 49
ASN 30 0.22 ALA 11 -0.09 THR 8
ARG 25 0.21 ILE 12 -0.12 LEU 52
ILE 18 0.11 ARG 13 -0.24 LEU 31
ALA 15 0.08 ARG 14 -0.16 LEU 52
ASN 27 0.15 ALA 15 -0.12 LEU 52
ALA 24 0.18 SER 16 -0.15 LEU 52
ILE 12 0.11 THR 17 -0.21 LEU 28
ARG 13 0.11 ILE 18 -0.17 ARG 25
ASN 27 0.08 GLU 19 -0.15 LEU 52
GLN 23 0.07 MET 20 -0.16 LEU 52
SER 16 0.14 PRO 21 -0.17 ILE 18
ILE 12 0.11 GLN 22 -0.13 LEU 52
ALA 11 0.11 GLN 23 -0.18 LEU 52
ILE 12 0.19 ALA 24 -0.17 THR 17
ILE 12 0.21 ARG 25 -0.17 ILE 18
VAL 4 0.17 GLN 26 -0.14 LEU 52
ALA 11 0.21 ASN 27 -0.19 LEU 52
VAL 4 0.25 LEU 28 -0.22 ARG 13
VAL 4 0.23 GLN 29 -0.17 ARG 13
VAL 4 0.26 ASN 30 -0.19 ILE 45
VAL 4 0.28 LEU 31 -0.24 ARG 13
VAL 4 0.23 PHE 32 -0.20 ARG 13
VAL 4 0.24 ILE 33 -0.17 ARG 13
VAL 4 0.26 ASN 34 -0.21 ARG 13
VAL 4 0.25 PHE 35 -0.21 ARG 13
VAL 4 0.22 CYS 36 -0.16 ARG 13
VAL 4 0.22 LEU 37 -0.18 ARG 13
VAL 4 0.22 ILE 38 -0.21 ARG 13
VAL 4 0.21 LEU 39 -0.17 ARG 13
VAL 4 0.19 ILE 40 -0.14 ARG 13
VAL 4 0.18 PHE 41 -0.18 ARG 13
VAL 4 0.17 LEU 42 -0.20 ARG 13
VAL 4 0.16 LEU 43 -0.14 ARG 13
VAL 4 0.14 LEU 44 -0.16 ARG 13
VAL 4 0.11 ILE 45 -0.22 ARG 13
VAL 4 0.12 CYS 46 -0.18 ARG 13
VAL 4 0.11 ILE 47 -0.15 ARG 13
VAL 4 0.08 ILE 48 -0.20 ARG 13
VAL 4 0.07 VAL 49 -0.21 ARG 13
VAL 4 0.09 MET 50 -0.16 ARG 13
VAL 4 0.08 LEU 51 -0.16 ARG 13
VAL 4 0.05 LEU 52 -0.21 ARG 13

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.