CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200335253692421

---  normal mode 17  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0462
VAL 2830.0429
GLY 2840.0374
ASN 2850.0297
THR 2860.0235
VAL 2870.0227
LEU 2880.0171
HIS 2890.0214
ALA 2900.0264
LEU 2910.0232
VAL 2920.0202
GLU 2930.0283
VAL 2940.0316
ALA 2950.0271
ASP 2960.0299
ASN 2970.0207
THR 2980.0335
VAL 2990.0365
ASP 3000.0422
ASN 3010.0343
THR 3020.0266
LYS 3030.0308
PHE 3040.0321
VAL 3050.0251
THR 3060.0217
SER 3070.0265
MET 3080.0232
TYR 3090.0163
ASN 3100.0194
GLU 3110.0211
ILE 3120.0157
LEU 3130.0125
ILE 3140.0181
LEU 3150.0169
GLY 3160.0104
ALA 3170.0146
LYS 3180.0199
LEU 3190.0149
HIS 3200.0108
PRO 3210.0158
THR 3220.0162
LEU 3230.0108
LYS 3240.0091
LEU 3250.0075
GLU 3260.0093
GLU 3270.0146
ILE 3280.0170
THR 3290.0224
ASN 3300.0268
ARG 3310.0350
LYS 3320.0341
GLY 3330.0292
LEU 3340.0203
THR 3350.0161
PRO 3360.0139
LEU 3370.0101
ALA 3380.0144
LEU 3390.0169
ALA 3400.0115
ALA 3410.0110
SER 3420.0133
SER 3430.0186
GLY 3440.0134
LYS 3450.0116
ILE 3460.0088
GLY 3470.0087
VAL 3480.0098
LEU 3490.0083
ALA 3500.0070
TYR 3510.0075
ILE 3520.0068
LEU 3530.0054
GLN 3540.0052
ARG 3550.0095
GLU 3560.0102
ILE 3570.0138
HIS 3580.0215
GLU 3590.0299
PRO 3600.0359
GLU 3610.0291
CYS 3620.0212
ARG 3630.0187
HIS 3640.0153
LEU 3650.0097
SER 3660.0082
ARG 3670.0048
LYS 3680.0041
PHE 3690.0043
THR 3700.0066
GLU 3710.0104
TRP 3720.0189
ALA 3730.0241
TYR 3740.0340
GLY 3750.0418
PRO 3760.0424
VAL 3770.0320
HIS 3780.0218
SER 3790.0148
SER 3800.0099
LEU 3810.0049
TYR 3820.0049
ASP 3830.0041
LEU 3840.0056
SER 3850.0064
CYS 3860.0092
ILE 3870.0087
ASP 3880.0095
THR 3890.0107
CYS 3900.0115
GLU 3910.0183
LYS 3920.0186
ASN 3930.0172
SER 3940.0111
VAL 3950.0100
LEU 3960.0100
GLU 3970.0111
VAL 3980.0110
ILE 3990.0104
ALA 4000.0083
TYR 4010.0070
SER 4020.0087
SER 4030.0078
SER 4040.0081
GLU 4050.0084
THR 4060.0112
PRO 4070.0108
ASN 4080.0104
ARG 4090.0103
HIS 4100.0106
ASP 4110.0108
MET 4120.0098
LEU 4130.0098
LEU 4140.0096
VAL 4150.0097
GLU 4160.0095
PRO 4170.0084
LEU 4180.0092
ASN 4190.0105
ARG 4200.0104
LEU 4210.0095
LEU 4220.0097
GLN 4230.0111
ASP 4240.0109
LYS 4250.0092
TRP 4260.0092
ASP 4270.0110
ARG 4280.0106
PHE 4290.0090
VAL 4300.0077
LYS 4310.0090
ARG 4320.0095
ILE 4330.0071
PHE 4340.0059
TYR 4350.0076
PHE 4360.0101
ASN 4370.0086
PHE 4380.0079
PHE 4390.0105
VAL 4400.0125
TYR 4410.0116
CYS 4420.0110
LEU 4430.0132
TYR 4440.0149
MET 4450.0147
ILE 4460.0146
ILE 4470.0150
PHE 4480.0162
THR 4490.0169
ALA 4500.0171
ALA 4510.0169
ALA 4520.0153
TYR 4530.0184
TYR 4540.0192
ARG 4550.0155
PRO 4560.0154
VAL 4570.0144
GLU 4580.0160
GLY 4590.0136
LEU 4600.0139
PRO 4610.0127
PRO 4620.0148
TYR 4630.0187
LYS 4640.0248
LEU 4650.0272
LYS 4660.0364
ASN 4670.0429
THR 4680.0462
VAL 4690.0460
GLY 4700.0429
ASP 4710.0332
TYR 4720.0318
PHE 4730.0346
ARG 4740.0269
VAL 4750.0175
THR 4760.0220
GLY 4770.0239
GLU 4780.0164
ILE 4790.0170
LEU 4800.0218
SER 4810.0188
VAL 4820.0178
SER 4830.0202
GLY 4840.0204
GLY 4850.0190
VAL 4860.0211
TYR 4870.0219
PHE 4880.0192
PHE 4890.0206
PHE 4900.0234
ARG 4910.0205
GLY 4920.0191
ILE 4930.0237
GLN 4940.0237
TYR 4950.0184
PHE 4960.0217
LEU 4970.0267
GLN 4980.0224
ARG 4990.0189
ARG 5000.0267
PRO 5010.0250
SER 5020.0305
LEU 5030.0299
LYS 5040.0309
SER 5050.0229
LEU 5060.0196
PHE 5070.0140
VAL 5080.0150
ASP 5090.0111
SER 5100.0087
TYR 5110.0093
SER 5120.0066
GLU 5130.0104
ILE 5140.0135
LEU 5150.0113
PHE 5160.0124
PHE 5170.0170
VAL 5180.0158
GLN 5190.0147
SER 5200.0171
LEU 5210.0171
PHE 5220.0150
MET 5230.0154
LEU 5240.0160
VAL 5250.0129
SER 5260.0110
VAL 5270.0115
VAL 5280.0077
LEU 5290.0028
TYR 5300.0070
PHE 5310.0071
SER 5320.0042
GLN 5330.0088
ARG 5340.0050
LYS 5350.0044
GLU 5360.0017
TYR 5370.0059
VAL 5380.0089
ALA 5390.0083
SER 5400.0106
MET 5410.0125
VAL 5420.0125
PHE 5430.0131
SER 5440.0144
LEU 5450.0142
ALA 5460.0139
MET 5470.0128
GLY 5480.0128
TRP 5490.0127
THR 5500.0101
ASN 5510.0095
MET 5520.0084
LEU 5530.0040
TYR 5540.0044
TYR 5550.0048
THR 5560.0049
ARG 5570.0049
GLY 5580.0060
PHE 5590.0088
GLN 5600.0111
GLN 5610.0125
MET 5620.0103
GLY 5630.0080
ILE 5640.0103
TYR 5650.0086
ALA 5660.0053
VAL 5670.0071
MET 5680.0091
ILE 5690.0063
GLU 5700.0071
LYS 5710.0090
MET 5720.0070
ILE 5730.0057
LEU 5740.0079
ARG 5750.0089
ASP 5760.0060
LEU 5770.0024
CYS 5780.0058
ARG 5790.0054
PHE 5800.0107
MET 5810.0109
PHE 5820.0121
VAL 5830.0157
TYR 5840.0155
LEU 5850.0154
VAL 5860.0167
PHE 5870.0163
LEU 5880.0153
PHE 5890.0152
GLY 5900.0152
PHE 5910.0117
SER 5920.0117
THR 5930.0144
ALA 5940.0112
VAL 5950.0081
VAL 5960.0124
THR 5970.0163
LEU 5980.0141
ILE 5990.0141
GLU 6000.0196
ASP 6010.0231
SER 6260.0117
TYR 6270.0094
ASN 6280.0152
SER 6290.0162
LEU 6300.0165
TYR 6310.0165
SER 6320.0105
THR 6330.0090
CYS 6340.0134
LEU 6350.0122
GLU 6360.0080
LEU 6370.0107
PHE 6380.0144
LYS 6390.0134
PHE 6400.0140
THR 6410.0167
ILE 6420.0187
GLY 6430.0174
MET 6440.0158
GLY 6450.0115
ASP 6460.0092
LEU 6470.0083
GLU 6480.0082
PHE 6490.0053
THR 6500.0086
GLU 6510.0147
ASN 6520.0168
TYR 6530.0160
ASP 6540.0183
PHE 6550.0154
LYS 6560.0124
ALA 6570.0092
VAL 6580.0065
PHE 6590.0042
ILE 6600.0038
ILE 6610.0027
LEU 6620.0059
LEU 6630.0065
LEU 6640.0091
ALA 6650.0122
TYR 6660.0130
VAL 6670.0137
ILE 6680.0156
LEU 6690.0165
THR 6700.0163
TYR 6710.0157
ILE 6720.0160
LEU 6730.0163
LEU 6740.0150
LEU 6750.0143
ASN 6760.0139
MET 6770.0098
LEU 6780.0069
ILE 6790.0076
ALA 6800.0039
LEU 6810.0064
MET 6820.0086
GLY 6830.0162
GLU 6840.0212
THR 6850.0178
VAL 6860.0170
ASN 6870.0266
LYS 6880.0267
ILE 6890.0182
ALA 6900.0175
GLN 6910.0175
GLU 6920.0146
SER 6930.0124
LYS 6940.0133
ASN 6950.0115
ILE 6960.0100
TRP 6970.0095
LYS 6980.0092
LEU 6990.0079
GLN 7000.0065
ARG 7010.0078
ALA 7020.0074
ILE 7030.0060
THR 7040.0056
ILE 7050.0066
LEU 7060.0058
ASP 7070.0039
THR 7080.0050
GLU 7090.0055
LYS 7100.0041
SER 7110.0047
PHE 7120.0055
LEU 7130.0067
LYS 7140.0058
CYS 7150.0082
MET 7160.0110
ARG 7170.0121
LYS 7180.0103
ALA 7190.0087
PHE 7200.0088
ARG 7210.0094
SER 7220.0090
GLY 7230.0071
LYS 7240.0073
LEU 7250.0068
LEU 7260.0044
TYR 7380.0042
ARG 7390.0041
TRP 7400.0058
CYS 7410.0053
PHE 7420.0073
ARG 7430.0098
VAL 7440.0112
ASP 7450.0154
GLU 7460.0170

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.