CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200335253692421

---  normal mode 18  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0542
VAL 2830.0268
GLY 2840.0215
ASN 2850.0175
THR 2860.0139
VAL 2870.0136
LEU 2880.0101
HIS 2890.0108
ALA 2900.0129
LEU 2910.0114
VAL 2920.0092
GLU 2930.0124
VAL 2940.0127
ALA 2950.0108
ASP 2960.0123
ASN 2970.0107
THR 2980.0143
VAL 2990.0140
ASP 3000.0153
ASN 3010.0139
THR 3020.0116
LYS 3030.0121
PHE 3040.0137
VAL 3050.0120
THR 3060.0101
SER 3070.0126
MET 3080.0130
TYR 3090.0102
ASN 3100.0107
GLU 3110.0137
ILE 3120.0137
LEU 3130.0112
ILE 3140.0131
LEU 3150.0167
GLY 3160.0157
ALA 3170.0145
LYS 3180.0187
LEU 3190.0217
HIS 3200.0190
PRO 3210.0171
THR 3220.0157
LEU 3230.0122
LYS 3240.0080
LEU 3250.0082
GLU 3260.0055
GLU 3270.0040
ILE 3280.0067
THR 3290.0086
ASN 3300.0126
ARG 3310.0163
LYS 3320.0169
GLY 3330.0113
LEU 3340.0103
THR 3350.0073
PRO 3360.0071
LEU 3370.0064
ALA 3380.0077
LEU 3390.0084
ALA 3400.0073
ALA 3410.0071
SER 3420.0070
SER 3430.0070
GLY 3440.0076
LYS 3450.0070
ILE 3460.0072
GLY 3470.0068
VAL 3480.0066
LEU 3490.0069
ALA 3500.0066
TYR 3510.0058
ILE 3520.0052
LEU 3530.0053
GLN 3540.0046
ARG 3550.0038
GLU 3560.0016
ILE 3570.0020
HIS 3580.0050
GLU 3590.0092
PRO 3600.0148
GLU 3610.0151
CYS 3620.0109
ARG 3630.0083
HIS 3640.0083
LEU 3650.0059
SER 3660.0020
ARG 3670.0017
LYS 3680.0042
PHE 3690.0064
THR 3700.0154
GLU 3710.0230
TRP 3720.0321
ALA 3730.0385
TYR 3740.0470
GLY 3750.0542
PRO 3760.0528
VAL 3770.0385
HIS 3780.0280
SER 3790.0185
SER 3800.0126
LEU 3810.0058
TYR 3820.0048
ASP 3830.0043
LEU 3840.0060
SER 3850.0068
CYS 3860.0079
ILE 3870.0078
ASP 3880.0096
THR 3890.0114
CYS 3900.0115
GLU 3910.0131
LYS 3920.0125
ASN 3930.0107
SER 3940.0090
VAL 3950.0074
LEU 3960.0074
GLU 3970.0080
VAL 3980.0077
ILE 3990.0060
ALA 4000.0045
TYR 4010.0065
SER 4020.0070
SER 4030.0102
SER 4040.0086
GLU 4050.0088
THR 4060.0041
PRO 4070.0042
ASN 4080.0038
ARG 4090.0044
HIS 4100.0028
ASP 4110.0021
MET 4120.0047
LEU 4130.0057
LEU 4140.0054
VAL 4150.0094
GLU 4160.0087
PRO 4170.0072
LEU 4180.0078
ASN 4190.0094
ARG 4200.0089
LEU 4210.0090
LEU 4220.0083
GLN 4230.0101
ASP 4240.0123
LYS 4250.0118
TRP 4260.0110
ASP 4270.0151
ARG 4280.0166
PHE 4290.0161
VAL 4300.0122
LYS 4310.0134
ARG 4320.0159
ILE 4330.0116
PHE 4340.0078
TYR 4350.0108
PHE 4360.0077
ASN 4370.0062
PHE 4380.0083
PHE 4390.0094
VAL 4400.0099
TYR 4410.0116
CYS 4420.0131
LEU 4430.0141
TYR 4440.0142
MET 4450.0141
ILE 4460.0146
ILE 4470.0151
PHE 4480.0133
THR 4490.0126
ALA 4500.0146
ALA 4510.0110
ALA 4520.0062
TYR 4530.0144
TYR 4540.0177
ARG 4550.0122
PRO 4560.0152
VAL 4570.0266
GLU 4580.0283
GLY 4590.0329
LEU 4600.0321
PRO 4610.0227
PRO 4620.0190
TYR 4630.0144
LYS 4640.0110
LEU 4650.0021
LYS 4660.0116
ASN 4670.0184
THR 4680.0278
VAL 4690.0325
GLY 4700.0301
ASP 4710.0178
TYR 4720.0211
PHE 4730.0246
ARG 4740.0147
VAL 4750.0105
THR 4760.0189
GLY 4770.0157
GLU 4780.0093
ILE 4790.0144
LEU 4800.0174
SER 4810.0134
VAL 4820.0137
SER 4830.0175
GLY 4840.0150
GLY 4850.0142
VAL 4860.0152
TYR 4870.0125
PHE 4880.0132
PHE 4890.0133
PHE 4900.0115
ARG 4910.0111
GLY 4920.0122
ILE 4930.0132
GLN 4940.0114
TYR 4950.0118
PHE 4960.0164
LEU 4970.0179
GLN 4980.0163
ARG 4990.0184
ARG 5000.0241
PRO 5010.0235
SER 5020.0303
LEU 5030.0344
LYS 5040.0355
SER 5050.0251
LEU 5060.0235
PHE 5070.0234
VAL 5080.0210
ASP 5090.0159
SER 5100.0152
TYR 5110.0182
SER 5120.0154
GLU 5130.0135
ILE 5140.0175
LEU 5150.0174
PHE 5160.0149
PHE 5170.0149
VAL 5180.0153
GLN 5190.0145
SER 5200.0139
LEU 5210.0133
PHE 5220.0108
MET 5230.0108
LEU 5240.0137
VAL 5250.0122
SER 5260.0092
VAL 5270.0143
VAL 5280.0214
LEU 5290.0204
TYR 5300.0162
PHE 5310.0239
SER 5320.0312
GLN 5330.0306
ARG 5340.0282
LYS 5350.0241
GLU 5360.0197
TYR 5370.0118
VAL 5380.0086
ALA 5390.0064
SER 5400.0047
MET 5410.0040
VAL 5420.0068
PHE 5430.0093
SER 5440.0111
LEU 5450.0111
ALA 5460.0115
MET 5470.0142
GLY 5480.0139
TRP 5490.0142
THR 5500.0167
ASN 5510.0155
MET 5520.0150
LEU 5530.0164
TYR 5540.0136
TYR 5550.0120
THR 5560.0148
ARG 5570.0121
GLY 5580.0100
PHE 5590.0147
GLN 5600.0163
GLN 5610.0223
MET 5620.0215
GLY 5630.0172
ILE 5640.0199
TYR 5650.0232
ALA 5660.0193
VAL 5670.0177
MET 5680.0218
ILE 5690.0221
GLU 5700.0206
LYS 5710.0205
MET 5720.0190
ILE 5730.0194
LEU 5740.0199
ARG 5750.0187
ASP 5760.0141
LEU 5770.0066
CYS 5780.0098
ARG 5790.0079
PHE 5800.0108
MET 5810.0113
PHE 5820.0146
VAL 5830.0197
TYR 5840.0196
LEU 5850.0196
VAL 5860.0211
PHE 5870.0213
LEU 5880.0202
PHE 5890.0193
GLY 5900.0192
PHE 5910.0150
SER 5920.0146
THR 5930.0175
ALA 5940.0134
VAL 5950.0089
VAL 5960.0143
THR 5970.0201
LEU 5980.0177
ILE 5990.0171
GLU 6000.0244
ASP 6010.0288
SER 6260.0113
TYR 6270.0086
ASN 6280.0168
SER 6290.0183
LEU 6300.0196
TYR 6310.0199
SER 6320.0120
THR 6330.0105
CYS 6340.0170
LEU 6350.0164
GLU 6360.0116
LEU 6370.0148
PHE 6380.0196
LYS 6390.0190
PHE 6400.0197
THR 6410.0227
ILE 6420.0260
GLY 6430.0244
MET 6440.0234
GLY 6450.0175
ASP 6460.0150
LEU 6470.0136
GLU 6480.0132
PHE 6490.0097
THR 6500.0118
GLU 6510.0202
ASN 6520.0216
TYR 6530.0208
ASP 6540.0247
PHE 6550.0215
LYS 6560.0176
ALA 6570.0133
VAL 6580.0091
PHE 6590.0051
ILE 6600.0064
ILE 6610.0038
LEU 6620.0075
LEU 6630.0093
LEU 6640.0130
ALA 6650.0168
TYR 6660.0178
VAL 6670.0189
ILE 6680.0214
LEU 6690.0222
THR 6700.0217
TYR 6710.0208
ILE 6720.0212
LEU 6730.0214
LEU 6740.0192
LEU 6750.0176
ASN 6760.0173
MET 6770.0113
LEU 6780.0057
ILE 6790.0090
ALA 6800.0065
LEU 6810.0123
MET 6820.0170
GLY 6830.0257
GLU 6840.0326
THR 6850.0276
VAL 6860.0256
ASN 6870.0380
LYS 6880.0373
ILE 6890.0242
ALA 6900.0228
GLN 6910.0184
GLU 6920.0145
SER 6930.0146
LYS 6940.0140
ASN 6950.0072
ILE 6960.0067
TRP 6970.0073
LYS 6980.0037
LEU 6990.0015
GLN 7000.0032
ARG 7010.0035
ALA 7020.0024
ILE 7030.0026
THR 7040.0033
ILE 7050.0060
LEU 7060.0068
ASP 7070.0059
THR 7080.0084
GLU 7090.0114
LYS 7100.0128
SER 7110.0136
PHE 7120.0164
LEU 7130.0225
LYS 7140.0293
CYS 7150.0325
MET 7160.0286
ARG 7170.0244
LYS 7180.0249
ALA 7190.0183
PHE 7200.0156
ARG 7210.0134
SER 7220.0093
GLY 7230.0071
LYS 7240.0066
LEU 7250.0053
LEU 7260.0052
TYR 7380.0049
ARG 7390.0058
TRP 7400.0061
CYS 7410.0041
PHE 7420.0040
ARG 7430.0065
VAL 7440.0085
ASP 7450.0134
GLU 7460.0186

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.