CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200335253692421

---  normal mode 20  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0731
VAL 2830.0286
GLY 2840.0260
ASN 2850.0201
THR 2860.0157
VAL 2870.0140
LEU 2880.0119
HIS 2890.0120
ALA 2900.0134
LEU 2910.0128
VAL 2920.0108
GLU 2930.0129
VAL 2940.0148
ALA 2950.0136
ASP 2960.0158
ASN 2970.0181
THR 2980.0262
VAL 2990.0311
ASP 3000.0313
ASN 3010.0225
THR 3020.0202
LYS 3030.0228
PHE 3040.0206
VAL 3050.0161
THR 3060.0158
SER 3070.0171
MET 3080.0150
TYR 3090.0126
ASN 3100.0140
GLU 3110.0139
ILE 3120.0130
LEU 3130.0135
ILE 3140.0139
LEU 3150.0130
GLY 3160.0134
ALA 3170.0141
LYS 3180.0138
LEU 3190.0135
HIS 3200.0136
PRO 3210.0144
THR 3220.0140
LEU 3230.0136
LYS 3240.0141
LEU 3250.0124
GLU 3260.0127
GLU 3270.0142
ILE 3280.0143
THR 3290.0142
ASN 3300.0142
ARG 3310.0194
LYS 3320.0147
GLY 3330.0138
LEU 3340.0109
THR 3350.0109
PRO 3360.0108
LEU 3370.0094
ALA 3380.0096
LEU 3390.0088
ALA 3400.0091
ALA 3410.0104
SER 3420.0098
SER 3430.0084
GLY 3440.0118
LYS 3450.0112
ILE 3460.0132
GLY 3470.0138
VAL 3480.0124
LEU 3490.0130
ALA 3500.0152
TYR 3510.0141
ILE 3520.0123
LEU 3530.0131
GLN 3540.0142
ARG 3550.0133
GLU 3560.0132
ILE 3570.0129
HIS 3580.0136
GLU 3590.0138
PRO 3600.0144
GLU 3610.0143
CYS 3620.0142
ARG 3630.0139
HIS 3640.0126
LEU 3650.0133
SER 3660.0123
ARG 3670.0109
LYS 3680.0123
PHE 3690.0138
THR 3700.0229
GLU 3710.0303
TRP 3720.0420
ALA 3730.0533
TYR 3740.0633
GLY 3750.0731
PRO 3760.0726
VAL 3770.0538
HIS 3780.0392
SER 3790.0255
SER 3800.0194
LEU 3810.0112
TYR 3820.0116
ASP 3830.0096
LEU 3840.0118
SER 3850.0099
CYS 3860.0102
ILE 3870.0121
ASP 3880.0139
THR 3890.0128
CYS 3900.0106
GLU 3910.0119
LYS 3920.0098
ASN 3930.0095
SER 3940.0111
VAL 3950.0112
LEU 3960.0124
GLU 3970.0109
VAL 3980.0103
ILE 3990.0110
ALA 4000.0083
TYR 4010.0094
SER 4020.0096
SER 4030.0098
SER 4040.0097
GLU 4050.0108
THR 4060.0101
PRO 4070.0114
ASN 4080.0117
ARG 4090.0111
HIS 4100.0105
ASP 4110.0108
MET 4120.0123
LEU 4130.0125
LEU 4140.0127
VAL 4150.0175
GLU 4160.0177
PRO 4170.0150
LEU 4180.0148
ASN 4190.0182
ARG 4200.0174
LEU 4210.0149
LEU 4220.0149
GLN 4230.0154
ASP 4240.0161
LYS 4250.0149
TRP 4260.0134
ASP 4270.0157
ARG 4280.0161
PHE 4290.0149
VAL 4300.0124
LYS 4310.0128
ARG 4320.0120
ILE 4330.0083
PHE 4340.0080
TYR 4350.0087
PHE 4360.0072
ASN 4370.0069
PHE 4380.0092
PHE 4390.0101
VAL 4400.0092
TYR 4410.0108
CYS 4420.0142
LEU 4430.0126
TYR 4440.0140
MET 4450.0163
ILE 4460.0157
ILE 4470.0159
PHE 4480.0178
THR 4490.0175
ALA 4500.0173
ALA 4510.0188
ALA 4520.0192
TYR 4530.0179
TYR 4540.0182
ARG 4550.0208
PRO 4560.0213
VAL 4570.0208
GLU 4580.0236
GLY 4590.0242
LEU 4600.0266
PRO 4610.0270
PRO 4620.0279
TYR 4630.0296
LYS 4640.0320
LEU 4650.0305
LYS 4660.0301
ASN 4670.0315
THR 4680.0258
VAL 4690.0236
GLY 4700.0198
ASP 4710.0231
TYR 4720.0262
PHE 4730.0232
ARG 4740.0223
VAL 4750.0235
THR 4760.0240
GLY 4770.0225
GLU 4780.0217
ILE 4790.0224
LEU 4800.0221
SER 4810.0192
VAL 4820.0186
SER 4830.0171
GLY 4840.0169
GLY 4850.0163
VAL 4860.0136
TYR 4870.0124
PHE 4880.0134
PHE 4890.0125
PHE 4900.0088
ARG 4910.0099
GLY 4920.0107
ILE 4930.0086
GLN 4940.0087
TYR 4950.0086
PHE 4960.0088
LEU 4970.0077
GLN 4980.0093
ARG 4990.0091
ARG 5000.0085
PRO 5010.0093
SER 5020.0085
LEU 5030.0114
LYS 5040.0107
SER 5050.0064
LEU 5060.0067
PHE 5070.0060
VAL 5080.0052
ASP 5090.0043
SER 5100.0060
TYR 5110.0081
SER 5120.0103
GLU 5130.0113
ILE 5140.0117
LEU 5150.0126
PHE 5160.0130
PHE 5170.0140
VAL 5180.0160
GLN 5190.0165
SER 5200.0162
LEU 5210.0176
PHE 5220.0199
MET 5230.0200
LEU 5240.0198
VAL 5250.0233
SER 5260.0235
VAL 5270.0241
VAL 5280.0270
LEU 5290.0269
TYR 5300.0267
PHE 5310.0280
SER 5320.0296
GLN 5330.0282
ARG 5340.0272
LYS 5350.0243
GLU 5360.0248
TYR 5370.0250
VAL 5380.0227
ALA 5390.0235
SER 5400.0237
MET 5410.0216
VAL 5420.0217
PHE 5430.0225
SER 5440.0196
LEU 5450.0189
ALA 5460.0200
MET 5470.0187
GLY 5480.0166
TRP 5490.0172
THR 5500.0164
ASN 5510.0148
MET 5520.0138
LEU 5530.0124
TYR 5540.0103
TYR 5550.0108
THR 5560.0090
ARG 5570.0076
GLY 5580.0080
PHE 5590.0088
GLN 5600.0083
GLN 5610.0096
MET 5620.0098
GLY 5630.0073
ILE 5640.0071
TYR 5650.0076
ALA 5660.0057
VAL 5670.0044
MET 5680.0050
ILE 5690.0044
GLU 5700.0037
LYS 5710.0055
MET 5720.0041
ILE 5730.0045
LEU 5740.0087
ARG 5750.0105
ASP 5760.0081
LEU 5770.0052
CYS 5780.0107
ARG 5790.0083
PHE 5800.0043
MET 5810.0072
PHE 5820.0073
VAL 5830.0065
TYR 5840.0077
LEU 5850.0091
VAL 5860.0096
PHE 5870.0094
LEU 5880.0091
PHE 5890.0089
GLY 5900.0098
PHE 5910.0081
SER 5920.0064
THR 5930.0068
ALA 5940.0058
VAL 5950.0029
VAL 5960.0031
THR 5970.0036
LEU 5980.0021
ILE 5990.0049
GLU 6000.0087
ASP 6010.0132
SER 6260.0099
TYR 6270.0061
ASN 6280.0078
SER 6290.0076
LEU 6300.0069
TYR 6310.0080
SER 6320.0043
THR 6330.0027
CYS 6340.0062
LEU 6350.0051
GLU 6360.0037
LEU 6370.0065
PHE 6380.0080
LYS 6390.0076
PHE 6400.0091
THR 6410.0099
ILE 6420.0107
GLY 6430.0109
MET 6440.0093
GLY 6450.0082
ASP 6460.0080
LEU 6470.0095
GLU 6480.0095
PHE 6490.0068
THR 6500.0083
GLU 6510.0117
ASN 6520.0110
TYR 6530.0083
ASP 6540.0086
PHE 6550.0087
LYS 6560.0106
ALA 6570.0116
VAL 6580.0079
PHE 6590.0063
ILE 6600.0097
ILE 6610.0107
LEU 6620.0081
LEU 6630.0080
LEU 6640.0106
ALA 6650.0111
TYR 6660.0100
VAL 6670.0097
ILE 6680.0099
LEU 6690.0102
THR 6700.0091
TYR 6710.0079
ILE 6720.0071
LEU 6730.0070
LEU 6740.0057
LEU 6750.0059
ASN 6760.0060
MET 6770.0071
LEU 6780.0065
ILE 6790.0129
ALA 6800.0187
LEU 6810.0188
MET 6820.0180
GLY 6830.0314
GLU 6840.0383
THR 6850.0271
VAL 6860.0232
ASN 6870.0397
LYS 6880.0379
ILE 6890.0191
ALA 6900.0160
GLN 6910.0149
GLU 6920.0122
SER 6930.0066
LYS 6940.0070
ASN 6950.0061
ILE 6960.0065
TRP 6970.0063
LYS 6980.0064
LEU 6990.0077
GLN 7000.0083
ARG 7010.0087
ALA 7020.0097
ILE 7030.0087
THR 7040.0092
ILE 7050.0108
LEU 7060.0105
ASP 7070.0091
THR 7080.0103
GLU 7090.0117
LYS 7100.0107
SER 7110.0097
PHE 7120.0122
LEU 7130.0123
LYS 7140.0171
CYS 7150.0170
MET 7160.0184
ARG 7170.0161
LYS 7180.0198
ALA 7190.0168
PHE 7200.0157
ARG 7210.0161
SER 7220.0127
GLY 7230.0102
LYS 7240.0091
LEU 7250.0055
LEU 7260.0049
TYR 7380.0062
ARG 7390.0076
TRP 7400.0097
CYS 7410.0081
PHE 7420.0104
ARG 7430.0107
VAL 7440.0187
ASP 7450.0254
GLU 7460.0335

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.