CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200335253692421

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0593
VAL 2830.0486
GLY 2840.0413
ASN 2850.0240
THR 2860.0119
VAL 2870.0090
LEU 2880.0022
HIS 2890.0024
ALA 2900.0075
LEU 2910.0104
VAL 2920.0075
GLU 2930.0067
VAL 2940.0087
ALA 2950.0084
ASP 2960.0077
ASN 2970.0018
THR 2980.0155
VAL 2990.0215
ASP 3000.0176
ASN 3010.0090
THR 3020.0079
LYS 3030.0106
PHE 3040.0146
VAL 3050.0136
THR 3060.0165
SER 3070.0223
MET 3080.0185
TYR 3090.0154
ASN 3100.0200
GLU 3110.0209
ILE 3120.0130
LEU 3130.0105
ILE 3140.0140
LEU 3150.0116
GLY 3160.0065
ALA 3170.0098
LYS 3180.0120
LEU 3190.0161
HIS 3200.0141
PRO 3210.0118
THR 3220.0289
LEU 3230.0247
LYS 3240.0200
LEU 3250.0087
GLU 3260.0134
GLU 3270.0215
ILE 3280.0162
THR 3290.0164
ASN 3300.0120
ARG 3310.0229
LYS 3320.0323
GLY 3330.0230
LEU 3340.0132
THR 3350.0109
PRO 3360.0080
LEU 3370.0067
ALA 3380.0070
LEU 3390.0065
ALA 3400.0065
ALA 3410.0057
SER 3420.0055
SER 3430.0070
GLY 3440.0060
LYS 3450.0060
ILE 3460.0047
GLY 3470.0052
VAL 3480.0073
LEU 3490.0096
ALA 3500.0085
TYR 3510.0092
ILE 3520.0087
LEU 3530.0081
GLN 3540.0079
ARG 3550.0084
GLU 3560.0125
ILE 3570.0114
HIS 3580.0394
GLU 3590.0299
PRO 3600.0054
GLU 3610.0243
CYS 3620.0181
ARG 3630.0076
HIS 3640.0099
LEU 3650.0081
SER 3660.0030
ARG 3670.0091
LYS 3680.0144
PHE 3690.0201
THR 3700.0266
GLU 3710.0192
TRP 3720.0140
ALA 3730.0511
TYR 3740.0380
GLY 3750.0593
PRO 3760.0457
VAL 3770.0413
HIS 3780.0348
SER 3790.0241
SER 3800.0219
LEU 3810.0204
TYR 3820.0094
ASP 3830.0096
LEU 3840.0096
SER 3850.0048
CYS 3860.0051
ILE 3870.0050
ASP 3880.0046
THR 3890.0103
CYS 3900.0140
GLU 3910.0371
LYS 3920.0228
ASN 3930.0159
SER 3940.0065
VAL 3950.0051
LEU 3960.0054
GLU 3970.0052
VAL 3980.0055
ILE 3990.0062
ALA 4000.0079
TYR 4010.0063
SER 4020.0078
SER 4030.0109
SER 4040.0086
GLU 4050.0103
THR 4060.0063
PRO 4070.0045
ASN 4080.0044
ARG 4090.0072
HIS 4100.0079
ASP 4110.0075
MET 4120.0065
LEU 4130.0079
LEU 4140.0071
VAL 4150.0076
GLU 4160.0076
PRO 4170.0096
LEU 4180.0097
ASN 4190.0103
ARG 4200.0095
LEU 4210.0068
LEU 4220.0097
GLN 4230.0151
ASP 4240.0165
LYS 4250.0126
TRP 4260.0131
ASP 4270.0235
ARG 4280.0246
PHE 4290.0203
VAL 4300.0141
LYS 4310.0189
ARG 4320.0197
ILE 4330.0120
PHE 4340.0095
TYR 4350.0107
PHE 4360.0137
ASN 4370.0148
PHE 4380.0107
PHE 4390.0135
VAL 4400.0171
TYR 4410.0113
CYS 4420.0078
LEU 4430.0110
TYR 4440.0081
MET 4450.0051
ILE 4460.0070
ILE 4470.0073
PHE 4480.0052
THR 4490.0055
ALA 4500.0107
ALA 4510.0080
ALA 4520.0077
TYR 4530.0142
TYR 4540.0128
ARG 4550.0130
PRO 4560.0124
VAL 4570.0173
GLU 4580.0165
GLY 4590.0170
LEU 4600.0102
PRO 4610.0109
PRO 4620.0121
TYR 4630.0134
LYS 4640.0117
LEU 4650.0055
LYS 4660.0081
ASN 4670.0107
THR 4680.0123
VAL 4690.0124
GLY 4700.0067
ASP 4710.0015
TYR 4720.0070
PHE 4730.0105
ARG 4740.0090
VAL 4750.0096
THR 4760.0104
GLY 4770.0077
GLU 4780.0064
ILE 4790.0067
LEU 4800.0054
SER 4810.0014
VAL 4820.0015
SER 4830.0025
GLY 4840.0072
GLY 4850.0054
VAL 4860.0036
TYR 4870.0100
PHE 4880.0089
PHE 4890.0036
PHE 4900.0120
ARG 4910.0146
GLY 4920.0104
ILE 4930.0114
GLN 4940.0182
TYR 4950.0147
PHE 4960.0091
LEU 4970.0161
GLN 4980.0178
ARG 4990.0107
ARG 5000.0121
PRO 5010.0110
SER 5020.0157
LEU 5030.0103
LYS 5040.0168
SER 5050.0111
LEU 5060.0135
PHE 5070.0176
VAL 5080.0171
ASP 5090.0169
SER 5100.0164
TYR 5110.0193
SER 5120.0165
GLU 5130.0141
ILE 5140.0153
LEU 5150.0152
PHE 5160.0126
PHE 5170.0077
VAL 5180.0091
GLN 5190.0095
SER 5200.0060
LEU 5210.0055
PHE 5220.0067
MET 5230.0046
LEU 5240.0047
VAL 5250.0062
SER 5260.0069
VAL 5270.0080
VAL 5280.0072
LEU 5290.0054
TYR 5300.0078
PHE 5310.0065
SER 5320.0036
GLN 5330.0056
ARG 5340.0040
LYS 5350.0044
GLU 5360.0050
TYR 5370.0064
VAL 5380.0039
ALA 5390.0049
SER 5400.0064
MET 5410.0040
VAL 5420.0055
PHE 5430.0078
SER 5440.0072
LEU 5450.0057
ALA 5460.0083
MET 5470.0096
GLY 5480.0079
TRP 5490.0074
THR 5500.0095
ASN 5510.0112
MET 5520.0090
LEU 5530.0081
TYR 5540.0101
TYR 5550.0089
THR 5560.0070
ARG 5570.0082
GLY 5580.0090
PHE 5590.0099
GLN 5600.0100
GLN 5610.0106
MET 5620.0106
GLY 5630.0099
ILE 5640.0107
TYR 5650.0149
ALA 5660.0148
VAL 5670.0147
MET 5680.0169
ILE 5690.0204
GLU 5700.0214
LYS 5710.0214
MET 5720.0186
ILE 5730.0221
LEU 5740.0211
ARG 5750.0171
ASP 5760.0131
LEU 5770.0107
CYS 5780.0085
ARG 5790.0036
PHE 5800.0045
MET 5810.0092
PHE 5820.0107
VAL 5830.0083
TYR 5840.0070
LEU 5850.0103
VAL 5860.0098
PHE 5870.0069
LEU 5880.0055
PHE 5890.0067
GLY 5900.0085
PHE 5910.0072
SER 5920.0053
THR 5930.0057
ALA 5940.0069
VAL 5950.0064
VAL 5960.0060
THR 5970.0063
LEU 5980.0076
ILE 5990.0077
GLU 6000.0079
ASP 6010.0088
SER 6260.0095
TYR 6270.0085
ASN 6280.0085
SER 6290.0069
LEU 6300.0070
TYR 6310.0073
SER 6320.0061
THR 6330.0062
CYS 6340.0060
LEU 6350.0044
GLU 6360.0038
LEU 6370.0035
PHE 6380.0046
LYS 6390.0026
PHE 6400.0021
THR 6410.0066
ILE 6420.0083
GLY 6430.0082
MET 6440.0024
GLY 6450.0014
ASP 6460.0022
LEU 6470.0069
GLU 6480.0065
PHE 6490.0075
THR 6500.0102
GLU 6510.0110
ASN 6520.0088
TYR 6530.0094
ASP 6540.0120
PHE 6550.0131
LYS 6560.0129
ALA 6570.0099
VAL 6580.0052
PHE 6590.0042
ILE 6600.0077
ILE 6610.0068
LEU 6620.0062
LEU 6630.0065
LEU 6640.0075
ALA 6650.0109
TYR 6660.0065
VAL 6670.0072
ILE 6680.0111
LEU 6690.0050
THR 6700.0060
TYR 6710.0145
ILE 6720.0168
LEU 6730.0127
LEU 6740.0132
LEU 6750.0174
ASN 6760.0219
MET 6770.0256
LEU 6780.0194
ILE 6790.0202
ALA 6800.0283
LEU 6810.0313
MET 6820.0252
GLY 6830.0294
GLU 6840.0396
THR 6850.0365
VAL 6860.0292
ASN 6870.0384
LYS 6880.0419
ILE 6890.0299
ALA 6900.0271
GLN 6910.0300
GLU 6920.0218
SER 6930.0190
LYS 6940.0204
ASN 6950.0132
ILE 6960.0111
TRP 6970.0103
LYS 6980.0093
LEU 6990.0090
GLN 7000.0097
ARG 7010.0087
ALA 7020.0098
ILE 7030.0085
THR 7040.0074
ILE 7050.0083
LEU 7060.0080
ASP 7070.0105
THR 7080.0115
GLU 7090.0127
LYS 7100.0128
SER 7110.0171
PHE 7120.0217
LEU 7130.0429
LYS 7140.0291
CYS 7150.0569
MET 7160.0267
ARG 7170.0262
LYS 7180.0133
ALA 7190.0177
PHE 7200.0175
ARG 7210.0157
SER 7220.0157
GLY 7230.0072
LYS 7240.0214
LEU 7250.0170
LEU 7260.0274
TYR 7380.0100
ARG 7390.0112
TRP 7400.0106
CYS 7410.0103
PHE 7420.0109
ARG 7430.0137
VAL 7440.0233
ASP 7450.0320
GLU 7460.0314

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.