CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200335253692421

---  normal mode 62  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0951
VAL 2830.0267
GLY 2840.0172
ASN 2850.0162
THR 2860.0112
VAL 2870.0143
LEU 2880.0137
HIS 2890.0126
ALA 2900.0178
LEU 2910.0156
VAL 2920.0141
GLU 2930.0222
VAL 2940.0256
ALA 2950.0220
ASP 2960.0268
ASN 2970.0230
THR 2980.0307
VAL 2990.0214
ASP 3000.0079
ASN 3010.0092
THR 3020.0069
LYS 3030.0169
PHE 3040.0176
VAL 3050.0120
THR 3060.0083
SER 3070.0171
MET 3080.0167
TYR 3090.0078
ASN 3100.0105
GLU 3110.0154
ILE 3120.0118
LEU 3130.0042
ILE 3140.0037
LEU 3150.0078
GLY 3160.0063
ALA 3170.0074
LYS 3180.0071
LEU 3190.0166
HIS 3200.0164
PRO 3210.0117
THR 3220.0302
LEU 3230.0204
LYS 3240.0165
LEU 3250.0070
GLU 3260.0105
GLU 3270.0116
ILE 3280.0091
THR 3290.0097
ASN 3300.0100
ARG 3310.0110
LYS 3320.0092
GLY 3330.0073
LEU 3340.0105
THR 3350.0103
PRO 3360.0112
LEU 3370.0070
ALA 3380.0096
LEU 3390.0089
ALA 3400.0090
ALA 3410.0066
SER 3420.0049
SER 3430.0097
GLY 3440.0118
LYS 3450.0128
ILE 3460.0093
GLY 3470.0096
VAL 3480.0093
LEU 3490.0059
ALA 3500.0060
TYR 3510.0053
ILE 3520.0059
LEU 3530.0065
GLN 3540.0069
ARG 3550.0034
GLU 3560.0017
ILE 3570.0023
HIS 3580.0227
GLU 3590.0235
PRO 3600.0078
GLU 3610.0204
CYS 3620.0162
ARG 3630.0046
HIS 3640.0091
LEU 3650.0062
SER 3660.0033
ARG 3670.0067
LYS 3680.0069
PHE 3690.0092
THR 3700.0233
GLU 3710.0347
TRP 3720.0278
ALA 3730.0256
TYR 3740.0288
GLY 3750.0357
PRO 3760.0300
VAL 3770.0245
HIS 3780.0174
SER 3790.0228
SER 3800.0156
LEU 3810.0143
TYR 3820.0058
ASP 3830.0058
LEU 3840.0080
SER 3850.0064
CYS 3860.0073
ILE 3870.0071
ASP 3880.0113
THR 3890.0100
CYS 3900.0114
GLU 3910.0088
LYS 3920.0093
ASN 3930.0086
SER 3940.0042
VAL 3950.0035
LEU 3960.0049
GLU 3970.0046
VAL 3980.0028
ILE 3990.0035
ALA 4000.0031
TYR 4010.0038
SER 4020.0053
SER 4030.0124
SER 4040.0139
GLU 4050.0188
THR 4060.0042
PRO 4070.0066
ASN 4080.0095
ARG 4090.0072
HIS 4100.0103
ASP 4110.0109
MET 4120.0068
LEU 4130.0067
LEU 4140.0099
VAL 4150.0107
GLU 4160.0102
PRO 4170.0100
LEU 4180.0095
ASN 4190.0112
ARG 4200.0110
LEU 4210.0142
LEU 4220.0106
GLN 4230.0098
ASP 4240.0176
LYS 4250.0162
TRP 4260.0112
ASP 4270.0189
ARG 4280.0217
PHE 4290.0187
VAL 4300.0102
LYS 4310.0139
ARG 4320.0174
ILE 4330.0067
PHE 4340.0089
TYR 4350.0180
PHE 4360.0220
ASN 4370.0199
PHE 4380.0190
PHE 4390.0206
VAL 4400.0206
TYR 4410.0158
CYS 4420.0080
LEU 4430.0062
TYR 4440.0074
MET 4450.0033
ILE 4460.0035
ILE 4470.0077
PHE 4480.0114
THR 4490.0101
ALA 4500.0117
ALA 4510.0101
ALA 4520.0151
TYR 4530.0196
TYR 4540.0147
ARG 4550.0077
PRO 4560.0076
VAL 4570.0143
GLU 4580.0161
GLY 4590.0175
LEU 4600.0255
PRO 4610.0134
PRO 4620.0112
TYR 4630.0032
LYS 4640.0095
LEU 4650.0107
LYS 4660.0163
ASN 4670.0167
THR 4680.0217
VAL 4690.0216
GLY 4700.0211
ASP 4710.0153
TYR 4720.0107
PHE 4730.0089
ARG 4740.0082
VAL 4750.0073
THR 4760.0052
GLY 4770.0070
GLU 4780.0066
ILE 4790.0080
LEU 4800.0076
SER 4810.0061
VAL 4820.0088
SER 4830.0099
GLY 4840.0067
GLY 4850.0087
VAL 4860.0114
TYR 4870.0112
PHE 4880.0113
PHE 4890.0125
PHE 4900.0127
ARG 4910.0132
GLY 4920.0122
ILE 4930.0105
GLN 4940.0117
TYR 4950.0106
PHE 4960.0057
LEU 4970.0036
GLN 4980.0044
ARG 4990.0058
ARG 5000.0048
PRO 5010.0068
SER 5020.0108
LEU 5030.0054
LYS 5040.0105
SER 5050.0064
LEU 5060.0047
PHE 5070.0059
VAL 5080.0058
ASP 5090.0048
SER 5100.0048
TYR 5110.0059
SER 5120.0070
GLU 5130.0089
ILE 5140.0091
LEU 5150.0085
PHE 5160.0091
PHE 5170.0094
VAL 5180.0086
GLN 5190.0064
SER 5200.0062
LEU 5210.0086
PHE 5220.0078
MET 5230.0083
LEU 5240.0093
VAL 5250.0075
SER 5260.0109
VAL 5270.0108
VAL 5280.0133
LEU 5290.0136
TYR 5300.0057
PHE 5310.0059
SER 5320.0197
GLN 5330.0242
ARG 5340.0266
LYS 5350.0137
GLU 5360.0166
TYR 5370.0118
VAL 5380.0074
ALA 5390.0102
SER 5400.0104
MET 5410.0089
VAL 5420.0083
PHE 5430.0076
SER 5440.0069
LEU 5450.0059
ALA 5460.0042
MET 5470.0039
GLY 5480.0037
TRP 5490.0029
THR 5500.0070
ASN 5510.0091
MET 5520.0097
LEU 5530.0153
TYR 5540.0140
TYR 5550.0131
THR 5560.0141
ARG 5570.0113
GLY 5580.0081
PHE 5590.0104
GLN 5600.0067
GLN 5610.0123
MET 5620.0142
GLY 5630.0122
ILE 5640.0104
TYR 5650.0108
ALA 5660.0111
VAL 5670.0109
MET 5680.0078
ILE 5690.0058
GLU 5700.0040
LYS 5710.0088
MET 5720.0091
ILE 5730.0087
LEU 5740.0102
ARG 5750.0169
ASP 5760.0182
LEU 5770.0180
CYS 5780.0179
ARG 5790.0186
PHE 5800.0169
MET 5810.0170
PHE 5820.0221
VAL 5830.0177
TYR 5840.0144
LEU 5850.0166
VAL 5860.0136
PHE 5870.0108
LEU 5880.0111
PHE 5890.0153
GLY 5900.0164
PHE 5910.0110
SER 5920.0056
THR 5930.0083
ALA 5940.0090
VAL 5950.0046
VAL 5960.0067
THR 5970.0073
LEU 5980.0120
ILE 5990.0075
GLU 6000.0103
ASP 6010.0089
SER 6260.0124
TYR 6270.0107
ASN 6280.0121
SER 6290.0116
LEU 6300.0041
TYR 6310.0082
SER 6320.0065
THR 6330.0041
CYS 6340.0041
LEU 6350.0030
GLU 6360.0026
LEU 6370.0023
PHE 6380.0057
LYS 6390.0080
PHE 6400.0064
THR 6410.0098
ILE 6420.0183
GLY 6430.0196
MET 6440.0143
GLY 6450.0085
ASP 6460.0126
LEU 6470.0102
GLU 6480.0054
PHE 6490.0057
THR 6500.0094
GLU 6510.0150
ASN 6520.0086
TYR 6530.0132
ASP 6540.0263
PHE 6550.0278
LYS 6560.0144
ALA 6570.0044
VAL 6580.0107
PHE 6590.0075
ILE 6600.0119
ILE 6610.0171
LEU 6620.0137
LEU 6630.0123
LEU 6640.0153
ALA 6650.0133
TYR 6660.0081
VAL 6670.0051
ILE 6680.0038
LEU 6690.0066
THR 6700.0078
TYR 6710.0074
ILE 6720.0073
LEU 6730.0086
LEU 6740.0124
LEU 6750.0127
ASN 6760.0125
MET 6770.0089
LEU 6780.0037
ILE 6790.0083
ALA 6800.0108
LEU 6810.0153
MET 6820.0237
GLY 6830.0271
GLU 6840.0186
THR 6850.0218
VAL 6860.0326
ASN 6870.0303
LYS 6880.0145
ILE 6890.0145
ALA 6900.0187
GLN 6910.0149
GLU 6920.0106
SER 6930.0108
LYS 6940.0098
ASN 6950.0066
ILE 6960.0085
TRP 6970.0064
LYS 6980.0045
LEU 6990.0062
GLN 7000.0064
ARG 7010.0018
ALA 7020.0042
ILE 7030.0047
THR 7040.0029
ILE 7050.0060
LEU 7060.0084
ASP 7070.0085
THR 7080.0082
GLU 7090.0145
LYS 7100.0153
SER 7110.0133
PHE 7120.0160
LEU 7130.0068
LYS 7140.0152
CYS 7150.0281
MET 7160.0125
ARG 7170.0263
LYS 7180.0231
ALA 7190.0244
PHE 7200.0220
ARG 7210.0194
SER 7220.0179
GLY 7230.0160
LYS 7240.0383
LEU 7250.0225
LEU 7260.0951
TYR 7380.0042
ARG 7390.0019
TRP 7400.0038
CYS 7410.0102
PHE 7420.0113
ARG 7430.0181
VAL 7440.0195
ASP 7450.0238
GLU 7460.0180

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.