CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200335253692421

---  normal mode 65  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0520
VAL 2830.0112
GLY 2840.0121
ASN 2850.0093
THR 2860.0094
VAL 2870.0125
LEU 2880.0104
HIS 2890.0096
ALA 2900.0133
LEU 2910.0126
VAL 2920.0106
GLU 2930.0140
VAL 2940.0159
ALA 2950.0152
ASP 2960.0167
ASN 2970.0149
THR 2980.0171
VAL 2990.0170
ASP 3000.0111
ASN 3010.0097
THR 3020.0125
LYS 3030.0091
PHE 3040.0066
VAL 3050.0091
THR 3060.0048
SER 3070.0043
MET 3080.0082
TYR 3090.0045
ASN 3100.0075
GLU 3110.0123
ILE 3120.0104
LEU 3130.0086
ILE 3140.0109
LEU 3150.0145
GLY 3160.0153
ALA 3170.0066
LYS 3180.0041
LEU 3190.0246
HIS 3200.0283
PRO 3210.0122
THR 3220.0154
LEU 3230.0172
LYS 3240.0170
LEU 3250.0089
GLU 3260.0099
GLU 3270.0105
ILE 3280.0023
THR 3290.0036
ASN 3300.0044
ARG 3310.0100
LYS 3320.0039
GLY 3330.0073
LEU 3340.0036
THR 3350.0050
PRO 3360.0078
LEU 3370.0058
ALA 3380.0072
LEU 3390.0070
ALA 3400.0073
ALA 3410.0066
SER 3420.0059
SER 3430.0054
GLY 3440.0052
LYS 3450.0080
ILE 3460.0075
GLY 3470.0081
VAL 3480.0085
LEU 3490.0059
ALA 3500.0060
TYR 3510.0040
ILE 3520.0018
LEU 3530.0026
GLN 3540.0031
ARG 3550.0064
GLU 3560.0093
ILE 3570.0105
HIS 3580.0062
GLU 3590.0109
PRO 3600.0095
GLU 3610.0019
CYS 3620.0077
ARG 3630.0087
HIS 3640.0090
LEU 3650.0084
SER 3660.0095
ARG 3670.0048
LYS 3680.0058
PHE 3690.0083
THR 3700.0113
GLU 3710.0139
TRP 3720.0106
ALA 3730.0123
TYR 3740.0072
GLY 3750.0113
PRO 3760.0122
VAL 3770.0129
HIS 3780.0102
SER 3790.0079
SER 3800.0053
LEU 3810.0054
TYR 3820.0015
ASP 3830.0020
LEU 3840.0020
SER 3850.0056
CYS 3860.0062
ILE 3870.0023
ASP 3880.0042
THR 3890.0076
CYS 3900.0149
GLU 3910.0378
LYS 3920.0305
ASN 3930.0193
SER 3940.0053
VAL 3950.0051
LEU 3960.0075
GLU 3970.0075
VAL 3980.0061
ILE 3990.0054
ALA 4000.0051
TYR 4010.0075
SER 4020.0081
SER 4030.0271
SER 4040.0153
GLU 4050.0384
THR 4060.0112
PRO 4070.0156
ASN 4080.0134
ARG 4090.0084
HIS 4100.0117
ASP 4110.0135
MET 4120.0084
LEU 4130.0093
LEU 4140.0125
VAL 4150.0109
GLU 4160.0093
PRO 4170.0092
LEU 4180.0102
ASN 4190.0106
ARG 4200.0114
LEU 4210.0105
LEU 4220.0094
GLN 4230.0121
ASP 4240.0157
LYS 4250.0158
TRP 4260.0129
ASP 4270.0172
ARG 4280.0223
PHE 4290.0227
VAL 4300.0178
LYS 4310.0124
ARG 4320.0151
ILE 4330.0184
PHE 4340.0184
TYR 4350.0142
PHE 4360.0161
ASN 4370.0194
PHE 4380.0208
PHE 4390.0192
VAL 4400.0138
TYR 4410.0108
CYS 4420.0182
LEU 4430.0171
TYR 4440.0139
MET 4450.0146
ILE 4460.0228
ILE 4470.0233
PHE 4480.0139
THR 4490.0124
ALA 4500.0140
ALA 4510.0118
ALA 4520.0108
TYR 4530.0171
TYR 4540.0177
ARG 4550.0202
PRO 4560.0267
VAL 4570.0306
GLU 4580.0224
GLY 4590.0208
LEU 4600.0233
PRO 4610.0244
PRO 4620.0307
TYR 4630.0033
LYS 4640.0257
LEU 4650.0229
LYS 4660.0298
ASN 4670.0193
THR 4680.0270
VAL 4690.0412
GLY 4700.0520
ASP 4710.0356
TYR 4720.0238
PHE 4730.0345
ARG 4740.0339
VAL 4750.0297
THR 4760.0298
GLY 4770.0276
GLU 4780.0178
ILE 4790.0308
LEU 4800.0291
SER 4810.0165
VAL 4820.0192
SER 4830.0162
GLY 4840.0178
GLY 4850.0162
VAL 4860.0168
TYR 4870.0172
PHE 4880.0147
PHE 4890.0132
PHE 4900.0157
ARG 4910.0153
GLY 4920.0141
ILE 4930.0135
GLN 4940.0164
TYR 4950.0149
PHE 4960.0104
LEU 4970.0128
GLN 4980.0188
ARG 4990.0160
ARG 5000.0143
PRO 5010.0175
SER 5020.0509
LEU 5030.0146
LYS 5040.0371
SER 5050.0164
LEU 5060.0098
PHE 5070.0079
VAL 5080.0069
ASP 5090.0040
SER 5100.0062
TYR 5110.0076
SER 5120.0092
GLU 5130.0125
ILE 5140.0137
LEU 5150.0118
PHE 5160.0130
PHE 5170.0123
VAL 5180.0132
GLN 5190.0126
SER 5200.0099
LEU 5210.0096
PHE 5220.0109
MET 5230.0100
LEU 5240.0068
VAL 5250.0088
SER 5260.0149
VAL 5270.0213
VAL 5280.0214
LEU 5290.0213
TYR 5300.0253
PHE 5310.0349
SER 5320.0347
GLN 5330.0368
ARG 5340.0273
LYS 5350.0160
GLU 5360.0135
TYR 5370.0161
VAL 5380.0118
ALA 5390.0074
SER 5400.0085
MET 5410.0061
VAL 5420.0085
PHE 5430.0103
SER 5440.0087
LEU 5450.0084
ALA 5460.0103
MET 5470.0118
GLY 5480.0113
TRP 5490.0139
THR 5500.0120
ASN 5510.0124
MET 5520.0156
LEU 5530.0188
TYR 5540.0192
TYR 5550.0218
THR 5560.0233
ARG 5570.0187
GLY 5580.0210
PHE 5590.0257
GLN 5600.0230
GLN 5610.0309
MET 5620.0339
GLY 5630.0232
ILE 5640.0194
TYR 5650.0258
ALA 5660.0159
VAL 5670.0051
MET 5680.0094
ILE 5690.0029
GLU 5700.0026
LYS 5710.0057
MET 5720.0062
ILE 5730.0094
LEU 5740.0088
ARG 5750.0126
ASP 5760.0159
LEU 5770.0240
CYS 5780.0271
ARG 5790.0214
PHE 5800.0081
MET 5810.0172
PHE 5820.0197
VAL 5830.0075
TYR 5840.0073
LEU 5850.0094
VAL 5860.0069
PHE 5870.0073
LEU 5880.0078
PHE 5890.0073
GLY 5900.0084
PHE 5910.0064
SER 5920.0032
THR 5930.0040
ALA 5940.0049
VAL 5950.0048
VAL 5960.0058
THR 5970.0068
LEU 5980.0088
ILE 5990.0043
GLU 6000.0035
ASP 6010.0069
SER 6260.0124
TYR 6270.0083
ASN 6280.0095
SER 6290.0072
LEU 6300.0067
TYR 6310.0045
SER 6320.0025
THR 6330.0031
CYS 6340.0047
LEU 6350.0063
GLU 6360.0048
LEU 6370.0022
PHE 6380.0089
LYS 6390.0113
PHE 6400.0077
THR 6410.0101
ILE 6420.0186
GLY 6430.0173
MET 6440.0191
GLY 6450.0116
ASP 6460.0156
LEU 6470.0091
GLU 6480.0046
PHE 6490.0034
THR 6500.0067
GLU 6510.0121
ASN 6520.0076
TYR 6530.0088
ASP 6540.0187
PHE 6550.0221
LYS 6560.0114
ALA 6570.0053
VAL 6580.0086
PHE 6590.0040
ILE 6600.0072
ILE 6610.0100
LEU 6620.0080
LEU 6630.0076
LEU 6640.0100
ALA 6650.0091
TYR 6660.0058
VAL 6670.0029
ILE 6680.0063
LEU 6690.0100
THR 6700.0098
TYR 6710.0080
ILE 6720.0066
LEU 6730.0115
LEU 6740.0147
LEU 6750.0147
ASN 6760.0147
MET 6770.0140
LEU 6780.0096
ILE 6790.0081
ALA 6800.0169
LEU 6810.0178
MET 6820.0163
GLY 6830.0291
GLU 6840.0249
THR 6850.0088
VAL 6860.0152
ASN 6870.0231
LYS 6880.0125
ILE 6890.0186
ALA 6900.0188
GLN 6910.0203
GLU 6920.0099
SER 6930.0036
LYS 6940.0055
ASN 6950.0067
ILE 6960.0068
TRP 6970.0112
LYS 6980.0102
LEU 6990.0108
GLN 7000.0129
ARG 7010.0105
ALA 7020.0100
ILE 7030.0103
THR 7040.0115
ILE 7050.0119
LEU 7060.0132
ASP 7070.0134
THR 7080.0140
GLU 7090.0143
LYS 7100.0104
SER 7110.0107
PHE 7120.0126
LEU 7130.0229
LYS 7140.0219
CYS 7150.0277
MET 7160.0166
ARG 7170.0207
LYS 7180.0141
ALA 7190.0180
PHE 7200.0136
ARG 7210.0124
SER 7220.0023
GLY 7230.0043
LYS 7240.0145
LEU 7250.0111
LEU 7260.0220
TYR 7380.0032
ARG 7390.0032
TRP 7400.0019
CYS 7410.0032
PHE 7420.0025
ARG 7430.0028
VAL 7440.0052
ASP 7450.0087
GLU 7460.0056

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.