CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200335253692421

---  normal mode 72  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0587
VAL 2830.0298
GLY 2840.0226
ASN 2850.0088
THR 2860.0064
VAL 2870.0089
LEU 2880.0102
HIS 2890.0074
ALA 2900.0087
LEU 2910.0087
VAL 2920.0073
GLU 2930.0081
VAL 2940.0073
ALA 2950.0086
ASP 2960.0124
ASN 2970.0090
THR 2980.0128
VAL 2990.0100
ASP 3000.0130
ASN 3010.0044
THR 3020.0031
LYS 3030.0091
PHE 3040.0083
VAL 3050.0084
THR 3060.0081
SER 3070.0093
MET 3080.0119
TYR 3090.0104
ASN 3100.0099
GLU 3110.0131
ILE 3120.0131
LEU 3130.0081
ILE 3140.0084
LEU 3150.0087
GLY 3160.0034
ALA 3170.0042
LYS 3180.0132
LEU 3190.0147
HIS 3200.0163
PRO 3210.0133
THR 3220.0150
LEU 3230.0115
LYS 3240.0061
LEU 3250.0062
GLU 3260.0063
GLU 3270.0061
ILE 3280.0056
THR 3290.0029
ASN 3300.0025
ARG 3310.0097
LYS 3320.0086
GLY 3330.0036
LEU 3340.0031
THR 3350.0054
PRO 3360.0059
LEU 3370.0068
ALA 3380.0065
LEU 3390.0045
ALA 3400.0059
ALA 3410.0089
SER 3420.0042
SER 3430.0087
GLY 3440.0113
LYS 3450.0110
ILE 3460.0117
GLY 3470.0091
VAL 3480.0072
LEU 3490.0085
ALA 3500.0066
TYR 3510.0051
ILE 3520.0062
LEU 3530.0057
GLN 3540.0043
ARG 3550.0045
GLU 3560.0055
ILE 3570.0075
HIS 3580.0083
GLU 3590.0103
PRO 3600.0101
GLU 3610.0048
CYS 3620.0054
ARG 3630.0068
HIS 3640.0042
LEU 3650.0045
SER 3660.0056
ARG 3670.0030
LYS 3680.0059
PHE 3690.0093
THR 3700.0136
GLU 3710.0187
TRP 3720.0151
ALA 3730.0051
TYR 3740.0157
GLY 3750.0238
PRO 3760.0325
VAL 3770.0200
HIS 3780.0135
SER 3790.0183
SER 3800.0154
LEU 3810.0157
TYR 3820.0075
ASP 3830.0064
LEU 3840.0078
SER 3850.0114
CYS 3860.0134
ILE 3870.0136
ASP 3880.0152
THR 3890.0157
CYS 3900.0165
GLU 3910.0231
LYS 3920.0155
ASN 3930.0094
SER 3940.0125
VAL 3950.0123
LEU 3960.0125
GLU 3970.0095
VAL 3980.0068
ILE 3990.0092
ALA 4000.0110
TYR 4010.0057
SER 4020.0050
SER 4030.0323
SER 4040.0312
GLU 4050.0587
THR 4060.0234
PRO 4070.0304
ASN 4080.0283
ARG 4090.0173
HIS 4100.0189
ASP 4110.0196
MET 4120.0094
LEU 4130.0092
LEU 4140.0103
VAL 4150.0091
GLU 4160.0076
PRO 4170.0053
LEU 4180.0081
ASN 4190.0103
ARG 4200.0063
LEU 4210.0086
LEU 4220.0072
GLN 4230.0090
ASP 4240.0096
LYS 4250.0043
TRP 4260.0056
ASP 4270.0126
ARG 4280.0148
PHE 4290.0149
VAL 4300.0102
LYS 4310.0105
ARG 4320.0158
ILE 4330.0127
PHE 4340.0100
TYR 4350.0055
PHE 4360.0197
ASN 4370.0220
PHE 4380.0140
PHE 4390.0241
VAL 4400.0296
TYR 4410.0200
CYS 4420.0157
LEU 4430.0167
TYR 4440.0164
MET 4450.0154
ILE 4460.0163
ILE 4470.0153
PHE 4480.0127
THR 4490.0141
ALA 4500.0149
ALA 4510.0045
ALA 4520.0159
TYR 4530.0248
TYR 4540.0099
ARG 4550.0164
PRO 4560.0187
VAL 4570.0321
GLU 4580.0233
GLY 4590.0106
LEU 4600.0210
PRO 4610.0129
PRO 4620.0284
TYR 4630.0241
LYS 4640.0259
LEU 4650.0188
LYS 4660.0214
ASN 4670.0181
THR 4680.0170
VAL 4690.0097
GLY 4700.0112
ASP 4710.0132
TYR 4720.0079
PHE 4730.0079
ARG 4740.0098
VAL 4750.0052
THR 4760.0066
GLY 4770.0082
GLU 4780.0024
ILE 4790.0054
LEU 4800.0102
SER 4810.0069
VAL 4820.0064
SER 4830.0144
GLY 4840.0134
GLY 4850.0110
VAL 4860.0106
TYR 4870.0127
PHE 4880.0136
PHE 4890.0114
PHE 4900.0078
ARG 4910.0074
GLY 4920.0075
ILE 4930.0054
GLN 4940.0081
TYR 4950.0082
PHE 4960.0065
LEU 4970.0207
GLN 4980.0295
ARG 4990.0257
ARG 5000.0198
PRO 5010.0124
SER 5020.0356
LEU 5030.0367
LYS 5040.0253
SER 5050.0246
LEU 5060.0246
PHE 5070.0254
VAL 5080.0215
ASP 5090.0207
SER 5100.0174
TYR 5110.0122
SER 5120.0081
GLU 5130.0120
ILE 5140.0150
LEU 5150.0130
PHE 5160.0123
PHE 5170.0147
VAL 5180.0147
GLN 5190.0152
SER 5200.0131
LEU 5210.0083
PHE 5220.0064
MET 5230.0085
LEU 5240.0086
VAL 5250.0086
SER 5260.0187
VAL 5270.0210
VAL 5280.0226
LEU 5290.0170
TYR 5300.0138
PHE 5310.0103
SER 5320.0083
GLN 5330.0203
ARG 5340.0236
LYS 5350.0137
GLU 5360.0249
TYR 5370.0209
VAL 5380.0183
ALA 5390.0136
SER 5400.0096
MET 5410.0089
VAL 5420.0089
PHE 5430.0087
SER 5440.0145
LEU 5450.0152
ALA 5460.0155
MET 5470.0160
GLY 5480.0165
TRP 5490.0151
THR 5500.0122
ASN 5510.0130
MET 5520.0088
LEU 5530.0082
TYR 5540.0093
TYR 5550.0054
THR 5560.0102
ARG 5570.0112
GLY 5580.0085
PHE 5590.0095
GLN 5600.0104
GLN 5610.0109
MET 5620.0140
GLY 5630.0162
ILE 5640.0183
TYR 5650.0236
ALA 5660.0243
VAL 5670.0251
MET 5680.0268
ILE 5690.0259
GLU 5700.0255
LYS 5710.0250
MET 5720.0235
ILE 5730.0250
LEU 5740.0172
ARG 5750.0182
ASP 5760.0201
LEU 5770.0221
CYS 5780.0176
ARG 5790.0158
PHE 5800.0163
MET 5810.0146
PHE 5820.0180
VAL 5830.0141
TYR 5840.0091
LEU 5850.0101
VAL 5860.0106
PHE 5870.0061
LEU 5880.0051
PHE 5890.0063
GLY 5900.0051
PHE 5910.0031
SER 5920.0034
THR 5930.0045
ALA 5940.0051
VAL 5950.0038
VAL 5960.0039
THR 5970.0034
LEU 5980.0055
ILE 5990.0037
GLU 6000.0044
ASP 6010.0104
SER 6260.0124
TYR 6270.0092
ASN 6280.0088
SER 6290.0066
LEU 6300.0061
TYR 6310.0051
SER 6320.0019
THR 6330.0022
CYS 6340.0035
LEU 6350.0048
GLU 6360.0027
LEU 6370.0016
PHE 6380.0062
LYS 6390.0072
PHE 6400.0039
THR 6410.0053
ILE 6420.0107
GLY 6430.0101
MET 6440.0148
GLY 6450.0072
ASP 6460.0105
LEU 6470.0071
GLU 6480.0048
PHE 6490.0057
THR 6500.0128
GLU 6510.0138
ASN 6520.0089
TYR 6530.0055
ASP 6540.0127
PHE 6550.0143
LYS 6560.0133
ALA 6570.0090
VAL 6580.0033
PHE 6590.0072
ILE 6600.0114
ILE 6610.0129
LEU 6620.0089
LEU 6630.0082
LEU 6640.0106
ALA 6650.0099
TYR 6660.0058
VAL 6670.0042
ILE 6680.0069
LEU 6690.0081
THR 6700.0063
TYR 6710.0057
ILE 6720.0076
LEU 6730.0099
LEU 6740.0073
LEU 6750.0094
ASN 6760.0153
MET 6770.0222
LEU 6780.0125
ILE 6790.0123
ALA 6800.0217
LEU 6810.0247
MET 6820.0163
GLY 6830.0225
GLU 6840.0353
THR 6850.0355
VAL 6860.0305
ASN 6870.0341
LYS 6880.0237
ILE 6890.0321
ALA 6900.0290
GLN 6910.0340
GLU 6920.0293
SER 6930.0208
LYS 6940.0169
ASN 6950.0109
ILE 6960.0123
TRP 6970.0116
LYS 6980.0084
LEU 6990.0080
GLN 7000.0066
ARG 7010.0048
ALA 7020.0045
ILE 7030.0077
THR 7040.0070
ILE 7050.0068
LEU 7060.0108
ASP 7070.0146
THR 7080.0105
GLU 7090.0159
LYS 7100.0241
SER 7110.0219
PHE 7120.0232
LEU 7130.0181
LYS 7140.0267
CYS 7150.0238
MET 7160.0077
ARG 7170.0169
LYS 7180.0234
ALA 7190.0159
PHE 7200.0097
ARG 7210.0030
SER 7220.0110
GLY 7230.0081
LYS 7240.0124
LEU 7250.0131
LEU 7260.0132
TYR 7380.0076
ARG 7390.0078
TRP 7400.0078
CYS 7410.0076
PHE 7420.0110
ARG 7430.0145
VAL 7440.0189
ASP 7450.0205
GLU 7460.0194

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.