CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200335253692421

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0576
VAL 2830.0156
GLY 2840.0151
ASN 2850.0123
THR 2860.0106
VAL 2870.0086
LEU 2880.0067
HIS 2890.0076
ALA 2900.0085
LEU 2910.0059
VAL 2920.0059
GLU 2930.0085
VAL 2940.0084
ALA 2950.0074
ASP 2960.0092
ASN 2970.0083
THR 2980.0098
VAL 2990.0093
ASP 3000.0087
ASN 3010.0075
THR 3020.0059
LYS 3030.0053
PHE 3040.0044
VAL 3050.0034
THR 3060.0019
SER 3070.0015
MET 3080.0018
TYR 3090.0019
ASN 3100.0028
GLU 3110.0032
ILE 3120.0050
LEU 3130.0057
ILE 3140.0069
LEU 3150.0077
GLY 3160.0090
ALA 3170.0101
LYS 3180.0111
LEU 3190.0120
HIS 3200.0130
PRO 3210.0134
THR 3220.0150
LEU 3230.0132
LYS 3240.0109
LEU 3250.0089
GLU 3260.0073
GLU 3270.0094
ILE 3280.0103
THR 3290.0106
ASN 3300.0113
ARG 3310.0139
LYS 3320.0128
GLY 3330.0116
LEU 3340.0090
THR 3350.0074
PRO 3360.0057
LEU 3370.0036
ALA 3380.0050
LEU 3390.0063
ALA 3400.0047
ALA 3410.0043
SER 3420.0066
SER 3430.0079
GLY 3440.0071
LYS 3450.0061
ILE 3460.0054
GLY 3470.0051
VAL 3480.0029
LEU 3490.0019
ALA 3500.0035
TYR 3510.0028
ILE 3520.0017
LEU 3530.0029
GLN 3540.0049
ARG 3550.0053
GLU 3560.0079
ILE 3570.0087
HIS 3580.0113
GLU 3590.0115
PRO 3600.0133
GLU 3610.0130
CYS 3620.0106
ARG 3630.0113
HIS 3640.0114
LEU 3650.0087
SER 3660.0081
ARG 3670.0066
LYS 3680.0081
PHE 3690.0106
THR 3700.0124
GLU 3710.0147
TRP 3720.0162
ALA 3730.0163
TYR 3740.0179
GLY 3750.0183
PRO 3760.0173
VAL 3770.0154
HIS 3780.0139
SER 3790.0133
SER 3800.0109
LEU 3810.0102
TYR 3820.0077
ASP 3830.0074
LEU 3840.0062
SER 3850.0070
CYS 3860.0060
ILE 3870.0037
ASP 3880.0042
THR 3890.0067
CYS 3900.0076
GLU 3910.0093
LYS 3920.0096
ASN 3930.0073
SER 3940.0048
VAL 3950.0027
LEU 3960.0020
GLU 3970.0043
VAL 3980.0054
ILE 3990.0046
ALA 4000.0046
TYR 4010.0063
SER 4020.0073
SER 4030.0096
SER 4040.0096
GLU 4050.0111
THR 4060.0093
PRO 4070.0101
ASN 4080.0084
ARG 4090.0072
HIS 4100.0080
ASP 4110.0076
MET 4120.0055
LEU 4130.0045
LEU 4140.0063
VAL 4150.0051
GLU 4160.0062
PRO 4170.0049
LEU 4180.0030
ASN 4190.0051
ARG 4200.0062
LEU 4210.0045
LEU 4220.0034
GLN 4230.0058
ASP 4240.0064
LYS 4250.0046
TRP 4260.0043
ASP 4270.0065
ARG 4280.0068
PHE 4290.0051
VAL 4300.0029
LYS 4310.0042
ARG 4320.0042
ILE 4330.0020
PHE 4340.0019
TYR 4350.0034
PHE 4360.0015
ASN 4370.0018
PHE 4380.0038
PHE 4390.0034
VAL 4400.0029
TYR 4410.0050
CYS 4420.0060
LEU 4430.0052
TYR 4440.0068
MET 4450.0086
ILE 4460.0086
ILE 4470.0089
PHE 4480.0109
THR 4490.0122
ALA 4500.0120
ALA 4510.0133
ALA 4520.0153
TYR 4530.0161
TYR 4540.0164
ARG 4550.0179
PRO 4560.0202
VAL 4570.0228
GLU 4580.0246
GLY 4590.0264
LEU 4600.0264
PRO 4610.0238
PRO 4620.0226
TYR 4630.0223
LYS 4640.0223
LEU 4650.0197
LYS 4660.0197
ASN 4670.0184
THR 4680.0166
VAL 4690.0137
GLY 4700.0140
ASP 4710.0158
TYR 4720.0142
PHE 4730.0119
ARG 4740.0138
VAL 4750.0148
THR 4760.0123
GLY 4770.0112
GLU 4780.0135
ILE 4790.0132
LEU 4800.0104
SER 4810.0111
VAL 4820.0128
SER 4830.0111
GLY 4840.0092
GLY 4850.0112
VAL 4860.0118
TYR 4870.0094
PHE 4880.0090
PHE 4890.0111
PHE 4900.0105
ARG 4910.0084
GLY 4920.0093
ILE 4930.0107
GLN 4940.0092
TYR 4950.0078
PHE 4960.0095
LEU 4970.0101
GLN 4980.0083
ARG 4990.0079
ARG 5000.0096
PRO 5010.0094
SER 5020.0109
LEU 5030.0126
LYS 5040.0124
SER 5050.0104
LEU 5060.0105
PHE 5070.0107
VAL 5080.0097
ASP 5090.0084
SER 5100.0081
TYR 5110.0092
SER 5120.0083
GLU 5130.0080
ILE 5140.0103
LEU 5150.0108
PHE 5160.0095
PHE 5170.0109
VAL 5180.0130
GLN 5190.0125
SER 5200.0123
LEU 5210.0146
PHE 5220.0158
MET 5230.0147
LEU 5240.0159
VAL 5250.0182
SER 5260.0183
VAL 5270.0182
VAL 5280.0204
LEU 5290.0220
TYR 5300.0211
PHE 5310.0224
SER 5320.0245
GLN 5330.0255
ARG 5340.0251
LYS 5350.0244
GLU 5360.0234
TYR 5370.0208
VAL 5380.0203
ALA 5390.0209
SER 5400.0188
MET 5410.0168
VAL 5420.0171
PHE 5430.0166
SER 5440.0142
LEU 5450.0137
ALA 5460.0147
MET 5470.0130
GLY 5480.0110
TRP 5490.0112
THR 5500.0116
ASN 5510.0096
MET 5520.0084
LEU 5530.0092
TYR 5540.0076
TYR 5550.0063
THR 5560.0079
ARG 5570.0076
GLY 5580.0066
PHE 5590.0080
GLN 5600.0092
GLN 5610.0106
MET 5620.0101
GLY 5630.0094
ILE 5640.0109
TYR 5650.0111
ALA 5660.0099
VAL 5670.0102
MET 5680.0116
ILE 5690.0109
GLU 5700.0108
LYS 5710.0122
MET 5720.0119
ILE 5730.0111
LEU 5740.0133
ARG 5750.0153
ASP 5760.0144
LEU 5770.0113
CYS 5780.0167
ARG 5790.0176
PHE 5800.0122
MET 5810.0133
PHE 5820.0195
VAL 5830.0154
TYR 5840.0093
LEU 5850.0162
VAL 5860.0172
PHE 5870.0090
LEU 5880.0135
PHE 5890.0202
GLY 5900.0155
PHE 5910.0117
SER 5920.0210
THR 5930.0233
ALA 5940.0163
VAL 5950.0222
VAL 5960.0302
THR 5970.0274
LEU 5980.0249
ILE 5990.0344
GLU 6000.0421
ASP 6010.0519
SER 6260.0576
TYR 6270.0477
ASN 6280.0466
SER 6290.0466
LEU 6300.0389
TYR 6310.0422
SER 6320.0434
THR 6330.0344
CYS 6340.0303
LEU 6350.0350
GLU 6360.0348
LEU 6370.0250
PHE 6380.0247
LYS 6390.0314
PHE 6400.0271
THR 6410.0214
ILE 6420.0292
GLY 6430.0350
MET 6440.0406
GLY 6450.0363
ASP 6460.0433
LEU 6470.0377
GLU 6480.0433
PHE 6490.0454
THR 6500.0464
GLU 6510.0494
ASN 6520.0484
TYR 6530.0389
ASP 6540.0335
PHE 6550.0279
LYS 6560.0338
ALA 6570.0296
VAL 6580.0204
PHE 6590.0244
ILE 6600.0287
ILE 6610.0228
LEU 6620.0155
LEU 6630.0213
LEU 6640.0247
ALA 6650.0174
TYR 6660.0129
VAL 6670.0202
ILE 6680.0224
LEU 6690.0151
THR 6700.0115
TYR 6710.0190
ILE 6720.0238
LEU 6730.0210
LEU 6740.0134
LEU 6750.0134
ASN 6760.0208
MET 6770.0201
LEU 6780.0147
ILE 6790.0175
ALA 6800.0224
LEU 6810.0209
MET 6820.0177
GLY 6830.0206
GLU 6840.0225
THR 6850.0194
VAL 6860.0169
ASN 6870.0193
LYS 6880.0187
ILE 6890.0155
ALA 6900.0145
GLN 6910.0129
GLU 6920.0122
SER 6930.0115
LYS 6940.0110
ASN 6950.0091
ILE 6960.0087
TRP 6970.0081
LYS 6980.0064
LEU 6990.0059
GLN 7000.0058
ARG 7010.0043
ALA 7020.0028
ILE 7030.0036
THR 7040.0025
ILE 7050.0006
LEU 7060.0022
ASP 7070.0033
THR 7080.0021
GLU 7090.0037
LYS 7100.0051
SER 7110.0054
PHE 7120.0053
LEU 7130.0069
LYS 7140.0088
CYS 7150.0108
MET 7160.0108
ARG 7170.0098
LYS 7180.0099
ALA 7190.0075
PHE 7200.0078
ARG 7210.0073
SER 7220.0096
GLY 7230.0112
LYS 7240.0137
LEU 7250.0150
LEU 7260.0151
TYR 7380.0133
ARG 7390.0109
TRP 7400.0100
CYS 7410.0102
PHE 7420.0090
ARG 7430.0105
VAL 7440.0100
ASP 7450.0125
GLU 7460.0123

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.