CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200335253692421

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0685
VAL 2830.0558
GLY 2840.0332
ASN 2850.0139
THR 2860.0216
VAL 2870.0205
LEU 2880.0163
HIS 2890.0127
ALA 2900.0172
LEU 2910.0232
VAL 2920.0237
GLU 2930.0234
VAL 2940.0294
ALA 2950.0263
ASP 2960.0244
ASN 2970.0162
THR 2980.0244
VAL 2990.0118
ASP 3000.0200
ASN 3010.0039
THR 3020.0150
LYS 3030.0238
PHE 3040.0182
VAL 3050.0214
THR 3060.0247
SER 3070.0185
MET 3080.0166
TYR 3090.0198
ASN 3100.0252
GLU 3110.0231
ILE 3120.0188
LEU 3130.0186
ILE 3140.0212
LEU 3150.0187
GLY 3160.0192
ALA 3170.0163
LYS 3180.0120
LEU 3190.0167
HIS 3200.0120
PRO 3210.0186
THR 3220.0222
LEU 3230.0121
LYS 3240.0116
LEU 3250.0091
GLU 3260.0076
GLU 3270.0116
ILE 3280.0295
THR 3290.0251
ASN 3300.0168
ARG 3310.0401
LYS 3320.0398
GLY 3330.0685
LEU 3340.0204
THR 3350.0140
PRO 3360.0083
LEU 3370.0112
ALA 3380.0092
LEU 3390.0107
ALA 3400.0135
ALA 3410.0135
SER 3420.0119
SER 3430.0131
GLY 3440.0123
LYS 3450.0159
ILE 3460.0142
GLY 3470.0109
VAL 3480.0150
LEU 3490.0119
ALA 3500.0102
TYR 3510.0112
ILE 3520.0054
LEU 3530.0033
GLN 3540.0033
ARG 3550.0087
GLU 3560.0082
ILE 3570.0096
HIS 3580.0219
GLU 3590.0101
PRO 3600.0267
GLU 3610.0154
CYS 3620.0151
ARG 3630.0184
HIS 3640.0212
LEU 3650.0205
SER 3660.0165
ARG 3670.0078
LYS 3680.0072
PHE 3690.0072
THR 3700.0101
GLU 3710.0073
TRP 3720.0044
ALA 3730.0019
TYR 3740.0032
GLY 3750.0092
PRO 3760.0089
VAL 3770.0075
HIS 3780.0060
SER 3790.0045
SER 3800.0053
LEU 3810.0059
TYR 3820.0075
ASP 3830.0094
LEU 3840.0102
SER 3850.0104
CYS 3860.0088
ILE 3870.0096
ASP 3880.0130
THR 3890.0120
CYS 3900.0098
GLU 3910.0359
LYS 3920.0097
ASN 3930.0155
SER 3940.0095
VAL 3950.0097
LEU 3960.0092
GLU 3970.0097
VAL 3980.0094
ILE 3990.0104
ALA 4000.0083
TYR 4010.0086
SER 4020.0109
SER 4030.0047
SER 4040.0312
GLU 4050.0397
THR 4060.0137
PRO 4070.0143
ASN 4080.0149
ARG 4090.0102
HIS 4100.0058
ASP 4110.0064
MET 4120.0080
LEU 4130.0049
LEU 4140.0033
VAL 4150.0039
GLU 4160.0019
PRO 4170.0023
LEU 4180.0044
ASN 4190.0045
ARG 4200.0031
LEU 4210.0025
LEU 4220.0053
GLN 4230.0123
ASP 4240.0138
LYS 4250.0100
TRP 4260.0099
ASP 4270.0200
ARG 4280.0222
PHE 4290.0188
VAL 4300.0143
LYS 4310.0186
ARG 4320.0301
ILE 4330.0199
PHE 4340.0128
TYR 4350.0109
PHE 4360.0162
ASN 4370.0159
PHE 4380.0190
PHE 4390.0316
VAL 4400.0249
TYR 4410.0124
CYS 4420.0166
LEU 4430.0186
TYR 4440.0142
MET 4450.0110
ILE 4460.0123
ILE 4470.0151
PHE 4480.0135
THR 4490.0142
ALA 4500.0137
ALA 4510.0070
ALA 4520.0082
TYR 4530.0161
TYR 4540.0020
ARG 4550.0066
PRO 4560.0114
VAL 4570.0348
GLU 4580.0194
GLY 4590.0286
LEU 4600.0283
PRO 4610.0135
PRO 4620.0029
TYR 4630.0098
LYS 4640.0090
LEU 4650.0098
LYS 4660.0073
ASN 4670.0165
THR 4680.0150
VAL 4690.0064
GLY 4700.0077
ASP 4710.0081
TYR 4720.0081
PHE 4730.0113
ARG 4740.0114
VAL 4750.0100
THR 4760.0063
GLY 4770.0037
GLU 4780.0013
ILE 4790.0082
LEU 4800.0097
SER 4810.0118
VAL 4820.0073
SER 4830.0196
GLY 4840.0205
GLY 4850.0123
VAL 4860.0154
TYR 4870.0179
PHE 4880.0133
PHE 4890.0080
PHE 4900.0074
ARG 4910.0089
GLY 4920.0084
ILE 4930.0093
GLN 4940.0099
TYR 4950.0098
PHE 4960.0077
LEU 4970.0107
GLN 4980.0044
ARG 4990.0068
ARG 5000.0176
PRO 5010.0048
SER 5020.0125
LEU 5030.0153
LYS 5040.0116
SER 5050.0147
LEU 5060.0161
PHE 5070.0164
VAL 5080.0139
ASP 5090.0159
SER 5100.0159
TYR 5110.0062
SER 5120.0070
GLU 5130.0105
ILE 5140.0085
LEU 5150.0084
PHE 5160.0121
PHE 5170.0069
VAL 5180.0065
GLN 5190.0094
SER 5200.0065
LEU 5210.0027
PHE 5220.0069
MET 5230.0047
LEU 5240.0062
VAL 5250.0114
SER 5260.0115
VAL 5270.0096
VAL 5280.0114
LEU 5290.0086
TYR 5300.0091
PHE 5310.0066
SER 5320.0111
GLN 5330.0131
ARG 5340.0131
LYS 5350.0137
GLU 5360.0130
TYR 5370.0132
VAL 5380.0125
ALA 5390.0133
SER 5400.0137
MET 5410.0126
VAL 5420.0191
PHE 5430.0172
SER 5440.0130
LEU 5450.0147
ALA 5460.0138
MET 5470.0111
GLY 5480.0103
TRP 5490.0105
THR 5500.0151
ASN 5510.0122
MET 5520.0134
LEU 5530.0153
TYR 5540.0141
TYR 5550.0144
THR 5560.0109
ARG 5570.0090
GLY 5580.0076
PHE 5590.0088
GLN 5600.0123
GLN 5610.0138
MET 5620.0139
GLY 5630.0117
ILE 5640.0115
TYR 5650.0165
ALA 5660.0150
VAL 5670.0095
MET 5680.0080
ILE 5690.0081
GLU 5700.0078
LYS 5710.0051
MET 5720.0053
ILE 5730.0107
LEU 5740.0097
ARG 5750.0047
ASP 5760.0063
LEU 5770.0125
CYS 5780.0122
ARG 5790.0113
PHE 5800.0073
MET 5810.0062
PHE 5820.0112
VAL 5830.0048
TYR 5840.0051
LEU 5850.0096
VAL 5860.0099
PHE 5870.0096
LEU 5880.0085
PHE 5890.0068
GLY 5900.0066
PHE 5910.0063
SER 5920.0045
THR 5930.0016
ALA 5940.0027
VAL 5950.0054
VAL 5960.0071
THR 5970.0054
LEU 5980.0100
ILE 5990.0080
GLU 6000.0114
ASP 6010.0285
SER 6260.0117
TYR 6270.0128
ASN 6280.0155
SER 6290.0156
LEU 6300.0094
TYR 6310.0136
SER 6320.0080
THR 6330.0039
CYS 6340.0042
LEU 6350.0084
GLU 6360.0082
LEU 6370.0053
PHE 6380.0095
LYS 6390.0094
PHE 6400.0055
THR 6410.0118
ILE 6420.0184
GLY 6430.0151
MET 6440.0117
GLY 6450.0061
ASP 6460.0091
LEU 6470.0088
GLU 6480.0093
PHE 6490.0094
THR 6500.0100
GLU 6510.0092
ASN 6520.0052
TYR 6530.0049
ASP 6540.0018
PHE 6550.0080
LYS 6560.0133
ALA 6570.0192
VAL 6580.0186
PHE 6590.0107
ILE 6600.0092
ILE 6610.0101
LEU 6620.0050
LEU 6630.0032
LEU 6640.0027
ALA 6650.0083
TYR 6660.0086
VAL 6670.0086
ILE 6680.0110
LEU 6690.0114
THR 6700.0104
TYR 6710.0124
ILE 6720.0115
LEU 6730.0082
LEU 6740.0031
LEU 6750.0035
ASN 6760.0056
MET 6770.0099
LEU 6780.0087
ILE 6790.0061
ALA 6800.0092
LEU 6810.0073
MET 6820.0043
GLY 6830.0132
GLU 6840.0165
THR 6850.0151
VAL 6860.0261
ASN 6870.0296
LYS 6880.0246
ILE 6890.0173
ALA 6900.0130
GLN 6910.0100
GLU 6920.0085
SER 6930.0071
LYS 6940.0051
ASN 6950.0062
ILE 6960.0064
TRP 6970.0068
LYS 6980.0062
LEU 6990.0067
GLN 7000.0051
ARG 7010.0038
ALA 7020.0056
ILE 7030.0064
THR 7040.0045
ILE 7050.0033
LEU 7060.0037
ASP 7070.0071
THR 7080.0046
GLU 7090.0054
LYS 7100.0159
SER 7110.0145
PHE 7120.0178
LEU 7130.0219
LYS 7140.0165
CYS 7150.0482
MET 7160.0320
ARG 7170.0447
LYS 7180.0401
ALA 7190.0168
PHE 7200.0094
ARG 7210.0087
SER 7220.0135
GLY 7230.0118
LYS 7240.0107
LEU 7250.0259
LEU 7260.0152
TYR 7380.0130
ARG 7390.0131
TRP 7400.0140
CYS 7410.0132
PHE 7420.0088
ARG 7430.0052
VAL 7440.0060
ASP 7450.0061
GLU 7460.0048

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.