CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200345243697656

---  normal mode 10  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0493
VAL 2830.0225
GLY 2840.0245
ASN 2850.0208
THR 2860.0203
VAL 2870.0177
LEU 2880.0156
HIS 2890.0136
ALA 2900.0125
LEU 2910.0107
VAL 2920.0077
GLU 2930.0077
VAL 2940.0059
ALA 2950.0031
ASP 2960.0017
ASN 2970.0039
THR 2980.0078
VAL 2990.0109
ASP 3000.0120
ASN 3010.0080
THR 3020.0076
LYS 3030.0120
PHE 3040.0125
VAL 3050.0099
THR 3060.0113
SER 3070.0156
MET 3080.0157
TYR 3090.0145
ASN 3100.0176
GLU 3110.0211
ILE 3120.0209
LEU 3130.0203
ILE 3140.0242
LEU 3150.0271
GLY 3160.0262
ALA 3170.0269
LYS 3180.0312
LEU 3190.0330
HIS 3200.0319
PRO 3210.0306
THR 3220.0320
LEU 3230.0292
LYS 3240.0243
LEU 3250.0212
GLU 3260.0176
GLU 3270.0206
ILE 3280.0215
THR 3290.0209
ASN 3300.0201
ARG 3310.0236
LYS 3320.0223
GLY 3330.0220
LEU 3340.0176
THR 3350.0157
PRO 3360.0124
LEU 3370.0091
ALA 3380.0109
LEU 3390.0104
ALA 3400.0060
ALA 3410.0074
SER 3420.0101
SER 3430.0085
GLY 3440.0070
LYS 3450.0035
ILE 3460.0028
GLY 3470.0017
VAL 3480.0033
LEU 3490.0032
ALA 3500.0013
TYR 3510.0053
ILE 3520.0065
LEU 3530.0046
GLN 3540.0047
ARG 3550.0089
GLU 3560.0117
ILE 3570.0162
HIS 3580.0193
GLU 3590.0241
PRO 3600.0280
GLU 3610.0283
CYS 3620.0236
ARG 3630.0202
HIS 3640.0203
LEU 3650.0180
SER 3660.0136
ARG 3670.0094
LYS 3680.0074
PHE 3690.0088
THR 3700.0082
GLU 3710.0073
TRP 3720.0081
ALA 3730.0116
TYR 3740.0125
GLY 3750.0154
PRO 3760.0143
VAL 3770.0103
HIS 3780.0076
SER 3790.0041
SER 3800.0035
LEU 3810.0043
TYR 3820.0052
ASP 3830.0084
LEU 3840.0095
SER 3850.0117
CYS 3860.0124
ILE 3870.0099
ASP 3880.0117
THR 3890.0142
CYS 3900.0153
GLU 3910.0180
LYS 3920.0189
ASN 3930.0158
SER 3940.0122
VAL 3950.0093
LEU 3960.0106
GLU 3970.0130
VAL 3980.0117
ILE 3990.0105
ALA 4000.0127
TYR 4010.0134
SER 4020.0129
SER 4030.0132
SER 4040.0133
GLU 4050.0124
THR 4060.0108
PRO 4070.0101
ASN 4080.0090
ARG 4090.0101
HIS 4100.0104
ASP 4110.0088
MET 4120.0072
LEU 4130.0079
LEU 4140.0069
VAL 4150.0037
GLU 4160.0033
PRO 4170.0036
LEU 4180.0066
ASN 4190.0074
ARG 4200.0066
LEU 4210.0086
LEU 4220.0103
GLN 4230.0104
ASP 4240.0110
LYS 4250.0122
TRP 4260.0129
ASP 4270.0134
ARG 4280.0136
PHE 4290.0148
VAL 4300.0147
LYS 4310.0151
ARG 4320.0163
ILE 4330.0154
PHE 4340.0147
TYR 4350.0152
PHE 4360.0141
ASN 4370.0129
PHE 4380.0125
PHE 4390.0119
VAL 4400.0098
TYR 4410.0087
CYS 4420.0078
LEU 4430.0047
TYR 4440.0037
MET 4450.0027
ILE 4460.0042
ILE 4470.0049
PHE 4480.0056
THR 4490.0092
ALA 4500.0123
ALA 4510.0155
ALA 4520.0160
TYR 4530.0210
TYR 4540.0253
ARG 4550.0259
PRO 4560.0332
VAL 4570.0382
GLU 4580.0423
GLY 4590.0418
LEU 4600.0386
PRO 4610.0338
PRO 4620.0340
TYR 4630.0389
LYS 4640.0446
LEU 4650.0421
LYS 4660.0471
ASN 4670.0493
THR 4680.0456
VAL 4690.0377
GLY 4700.0336
ASP 4710.0342
TYR 4720.0325
PHE 4730.0242
ARG 4740.0233
VAL 4750.0254
THR 4760.0221
GLY 4770.0148
GLU 4780.0163
ILE 4790.0189
LEU 4800.0143
SER 4810.0084
VAL 4820.0107
SER 4830.0131
GLY 4840.0091
GLY 4850.0070
VAL 4860.0105
TYR 4870.0114
PHE 4880.0100
PHE 4890.0103
PHE 4900.0117
ARG 4910.0124
GLY 4920.0117
ILE 4930.0123
GLN 4940.0140
TYR 4950.0140
PHE 4960.0146
LEU 4970.0161
GLN 4980.0162
ARG 4990.0160
ARG 5000.0174
PRO 5010.0170
SER 5020.0168
LEU 5030.0160
LYS 5040.0169
SER 5050.0159
LEU 5060.0148
PHE 5070.0140
VAL 5080.0141
ASP 5090.0140
SER 5100.0137
TYR 5110.0133
SER 5120.0125
GLU 5130.0126
ILE 5140.0120
LEU 5150.0104
PHE 5160.0098
PHE 5170.0094
VAL 5180.0070
GLN 5190.0048
SER 5200.0057
LEU 5210.0051
PHE 5220.0015
MET 5230.0048
LEU 5240.0088
VAL 5250.0080
SER 5260.0115
VAL 5270.0162
VAL 5280.0181
LEU 5290.0191
TYR 5300.0231
PHE 5310.0278
SER 5320.0273
GLN 5330.0317
ARG 5340.0272
LYS 5350.0280
GLU 5360.0214
TYR 5370.0173
VAL 5380.0187
ALA 5390.0167
SER 5400.0099
MET 5410.0095
VAL 5420.0119
PHE 5430.0095
SER 5440.0037
LEU 5450.0061
ALA 5460.0097
MET 5470.0075
GLY 5480.0054
TRP 5490.0084
THR 5500.0101
ASN 5510.0101
MET 5520.0111
LEU 5530.0122
TYR 5540.0123
TYR 5550.0133
THR 5560.0129
ARG 5570.0128
GLY 5580.0133
PHE 5590.0128
GLN 5600.0123
GLN 5610.0126
MET 5620.0129
GLY 5630.0125
ILE 5640.0122
TYR 5650.0124
ALA 5660.0125
VAL 5670.0121
MET 5680.0126
ILE 5690.0135
GLU 5700.0129
LYS 5710.0130
MET 5720.0142
ILE 5730.0148
LEU 5740.0141
ARG 5750.0140
ASP 5760.0161
LEU 5770.0172
CYS 5780.0184
ARG 5790.0194
PHE 5800.0203
MET 5810.0202
PHE 5820.0202
VAL 5830.0190
TYR 5840.0182
LEU 5850.0179
VAL 5860.0159
PHE 5870.0137
LEU 5880.0140
PHE 5890.0138
GLY 5900.0099
PHE 5910.0076
SER 5920.0106
THR 5930.0094
ALA 5940.0052
VAL 5950.0079
VAL 5960.0124
THR 5970.0109
LEU 5980.0109
ILE 5990.0150
GLU 6000.0198
ASP 6010.0248
SER 6260.0256
TYR 6270.0208
ASN 6280.0208
SER 6290.0214
LEU 6300.0183
TYR 6310.0220
SER 6320.0211
THR 6330.0159
CYS 6340.0173
LEU 6350.0197
GLU 6360.0158
LEU 6370.0131
PHE 6380.0171
LYS 6390.0169
PHE 6400.0136
THR 6410.0172
ILE 6420.0197
GLY 6430.0164
MET 6440.0160
GLY 6450.0125
ASP 6460.0110
LEU 6470.0071
GLU 6480.0097
PHE 6490.0139
THR 6500.0162
GLU 6510.0181
ASN 6520.0205
TYR 6530.0172
ASP 6540.0169
PHE 6550.0145
LYS 6560.0124
ALA 6570.0110
VAL 6580.0084
PHE 6590.0066
ILE 6600.0045
ILE 6610.0048
LEU 6620.0020
LEU 6630.0037
LEU 6640.0046
ALA 6650.0072
TYR 6660.0084
VAL 6670.0098
ILE 6680.0116
LEU 6690.0132
THR 6700.0150
TYR 6710.0151
ILE 6720.0161
LEU 6730.0170
LEU 6740.0184
LEU 6750.0193
ASN 6760.0199
MET 6770.0190
LEU 6780.0189
ILE 6790.0190
ALA 6800.0178
LEU 6810.0171
MET 6820.0163
GLY 6830.0154
GLU 6840.0150
THR 6850.0143
VAL 6860.0133
ASN 6870.0131
LYS 6880.0133
ILE 6890.0126
ALA 6900.0123
GLN 6910.0118
GLU 6920.0118
SER 6930.0119
LYS 6940.0115
ASN 6950.0109
ILE 6960.0116
TRP 6970.0122
LYS 6980.0113
LEU 6990.0117
GLN 7000.0128
ARG 7010.0128
ALA 7020.0123
ILE 7030.0131
THR 7040.0141
ILE 7050.0134
LEU 7060.0133
ASP 7070.0141
THR 7080.0149
GLU 7090.0143
LYS 7100.0150
SER 7110.0166
PHE 7120.0170
LEU 7130.0190
LYS 7140.0203
CYS 7150.0201
MET 7160.0192
ARG 7170.0169
LYS 7180.0165
ALA 7190.0160
PHE 7200.0137
ARG 7210.0115
SER 7220.0101
GLY 7230.0098
LYS 7240.0112
LEU 7250.0106
LEU 7260.0123
TYR 7380.0131
ARG 7390.0128
TRP 7400.0110
CYS 7410.0083
PHE 7420.0059
ARG 7430.0028
VAL 7440.0019
ASP 7450.0041
GLU 7460.0063

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.