CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200345243697656

---  normal mode 104  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0593
VAL 2830.0145
GLY 2840.0045
ASN 2850.0044
THR 2860.0052
VAL 2870.0054
LEU 2880.0035
HIS 2890.0021
ALA 2900.0024
LEU 2910.0029
VAL 2920.0019
GLU 2930.0012
VAL 2940.0018
ALA 2950.0043
ASP 2960.0059
ASN 2970.0025
THR 2980.0097
VAL 2990.0156
ASP 3000.0074
ASN 3010.0092
THR 3020.0105
LYS 3030.0126
PHE 3040.0104
VAL 3050.0058
THR 3060.0058
SER 3070.0040
MET 3080.0066
TYR 3090.0083
ASN 3100.0147
GLU 3110.0166
ILE 3120.0149
LEU 3130.0137
ILE 3140.0124
LEU 3150.0141
GLY 3160.0137
ALA 3170.0101
LYS 3180.0116
LEU 3190.0106
HIS 3200.0107
PRO 3210.0068
THR 3220.0080
LEU 3230.0099
LYS 3240.0109
LEU 3250.0035
GLU 3260.0060
GLU 3270.0097
ILE 3280.0054
THR 3290.0029
ASN 3300.0018
ARG 3310.0126
LYS 3320.0125
GLY 3330.0124
LEU 3340.0042
THR 3350.0043
PRO 3360.0044
LEU 3370.0033
ALA 3380.0041
LEU 3390.0035
ALA 3400.0030
ALA 3410.0049
SER 3420.0074
SER 3430.0073
GLY 3440.0081
LYS 3450.0073
ILE 3460.0079
GLY 3470.0091
VAL 3480.0059
LEU 3490.0032
ALA 3500.0092
TYR 3510.0105
ILE 3520.0072
LEU 3530.0058
GLN 3540.0083
ARG 3550.0142
GLU 3560.0130
ILE 3570.0103
HIS 3580.0142
GLU 3590.0091
PRO 3600.0250
GLU 3610.0093
CYS 3620.0053
ARG 3630.0052
HIS 3640.0080
LEU 3650.0077
SER 3660.0108
ARG 3670.0087
LYS 3680.0080
PHE 3690.0077
THR 3700.0169
GLU 3710.0122
TRP 3720.0078
ALA 3730.0027
TYR 3740.0039
GLY 3750.0145
PRO 3760.0146
VAL 3770.0118
HIS 3780.0091
SER 3790.0073
SER 3800.0090
LEU 3810.0089
TYR 3820.0069
ASP 3830.0077
LEU 3840.0076
SER 3850.0058
CYS 3860.0056
ILE 3870.0059
ASP 3880.0076
THR 3890.0087
CYS 3900.0097
GLU 3910.0143
LYS 3920.0088
ASN 3930.0053
SER 3940.0072
VAL 3950.0070
LEU 3960.0071
GLU 3970.0087
VAL 3980.0093
ILE 3990.0089
ALA 4000.0043
TYR 4010.0100
SER 4020.0172
SER 4030.0222
SER 4040.0316
GLU 4050.0347
THR 4060.0119
PRO 4070.0128
ASN 4080.0104
ARG 4090.0111
HIS 4100.0078
ASP 4110.0061
MET 4120.0083
LEU 4130.0062
LEU 4140.0061
VAL 4150.0070
GLU 4160.0065
PRO 4170.0062
LEU 4180.0046
ASN 4190.0025
ARG 4200.0039
LEU 4210.0039
LEU 4220.0073
GLN 4230.0088
ASP 4240.0128
LYS 4250.0130
TRP 4260.0126
ASP 4270.0121
ARG 4280.0118
PHE 4290.0105
VAL 4300.0070
LYS 4310.0093
ARG 4320.0120
ILE 4330.0112
PHE 4340.0091
TYR 4350.0073
PHE 4360.0146
ASN 4370.0149
PHE 4380.0122
PHE 4390.0134
VAL 4400.0076
TYR 4410.0014
CYS 4420.0059
LEU 4430.0115
TYR 4440.0100
MET 4450.0108
ILE 4460.0108
ILE 4470.0158
PHE 4480.0215
THR 4490.0172
ALA 4500.0267
ALA 4510.0235
ALA 4520.0124
TYR 4530.0593
TYR 4540.0283
ARG 4550.0188
PRO 4560.0276
VAL 4570.0327
GLU 4580.0239
GLY 4590.0084
LEU 4600.0307
PRO 4610.0330
PRO 4620.0406
TYR 4630.0096
LYS 4640.0093
LEU 4650.0064
LYS 4660.0104
ASN 4670.0150
THR 4680.0161
VAL 4690.0175
GLY 4700.0217
ASP 4710.0175
TYR 4720.0117
PHE 4730.0132
ARG 4740.0138
VAL 4750.0110
THR 4760.0055
GLY 4770.0055
GLU 4780.0101
ILE 4790.0140
LEU 4800.0139
SER 4810.0120
VAL 4820.0084
SER 4830.0142
GLY 4840.0182
GLY 4850.0157
VAL 4860.0184
TYR 4870.0225
PHE 4880.0166
PHE 4890.0139
PHE 4900.0160
ARG 4910.0148
GLY 4920.0127
ILE 4930.0128
GLN 4940.0158
TYR 4950.0169
PHE 4960.0096
LEU 4970.0222
GLN 4980.0305
ARG 4990.0190
ARG 5000.0153
PRO 5010.0173
SER 5020.0573
LEU 5030.0223
LYS 5040.0233
SER 5050.0319
LEU 5060.0284
PHE 5070.0309
VAL 5080.0186
ASP 5090.0070
SER 5100.0087
TYR 5110.0160
SER 5120.0195
GLU 5130.0153
ILE 5140.0128
LEU 5150.0094
PHE 5160.0119
PHE 5170.0086
VAL 5180.0032
GLN 5190.0092
SER 5200.0131
LEU 5210.0084
PHE 5220.0069
MET 5230.0131
LEU 5240.0122
VAL 5250.0102
SER 5260.0134
VAL 5270.0187
VAL 5280.0123
LEU 5290.0065
TYR 5300.0163
PHE 5310.0161
SER 5320.0154
GLN 5330.0399
ARG 5340.0330
LYS 5350.0224
GLU 5360.0196
TYR 5370.0167
VAL 5380.0205
ALA 5390.0239
SER 5400.0192
MET 5410.0193
VAL 5420.0268
PHE 5430.0248
SER 5440.0226
LEU 5450.0215
ALA 5460.0218
MET 5470.0144
GLY 5480.0132
TRP 5490.0109
THR 5500.0103
ASN 5510.0070
MET 5520.0048
LEU 5530.0071
TYR 5540.0088
TYR 5550.0084
THR 5560.0083
ARG 5570.0085
GLY 5580.0073
PHE 5590.0080
GLN 5600.0085
GLN 5610.0189
MET 5620.0152
GLY 5630.0103
ILE 5640.0106
TYR 5650.0104
ALA 5660.0107
VAL 5670.0119
MET 5680.0076
ILE 5690.0095
GLU 5700.0108
LYS 5710.0081
MET 5720.0110
ILE 5730.0148
LEU 5740.0155
ARG 5750.0144
ASP 5760.0110
LEU 5770.0180
CYS 5780.0151
ARG 5790.0054
PHE 5800.0120
MET 5810.0106
PHE 5820.0112
VAL 5830.0074
TYR 5840.0034
LEU 5850.0031
VAL 5860.0062
PHE 5870.0065
LEU 5880.0068
PHE 5890.0071
GLY 5900.0063
PHE 5910.0074
SER 5920.0071
THR 5930.0078
ALA 5940.0119
VAL 5950.0118
VAL 5960.0128
THR 5970.0186
LEU 5980.0090
ILE 5990.0140
GLU 6000.0172
ASP 6010.0278
SER 6260.0273
TYR 6270.0193
ASN 6280.0204
SER 6290.0332
LEU 6300.0163
TYR 6310.0143
SER 6320.0124
THR 6330.0075
CYS 6340.0126
LEU 6350.0101
GLU 6360.0108
LEU 6370.0109
PHE 6380.0086
LYS 6390.0085
PHE 6400.0095
THR 6410.0100
ILE 6420.0130
GLY 6430.0152
MET 6440.0167
GLY 6450.0118
ASP 6460.0097
LEU 6470.0060
GLU 6480.0054
PHE 6490.0051
THR 6500.0176
GLU 6510.0182
ASN 6520.0164
TYR 6530.0119
ASP 6540.0058
PHE 6550.0086
LYS 6560.0167
ALA 6570.0206
VAL 6580.0098
PHE 6590.0088
ILE 6600.0133
ILE 6610.0133
LEU 6620.0071
LEU 6630.0087
LEU 6640.0105
ALA 6650.0139
TYR 6660.0118
VAL 6670.0105
ILE 6680.0135
LEU 6690.0157
THR 6700.0116
TYR 6710.0110
ILE 6720.0162
LEU 6730.0173
LEU 6740.0139
LEU 6750.0142
ASN 6760.0139
MET 6770.0099
LEU 6780.0149
ILE 6790.0121
ALA 6800.0126
LEU 6810.0103
MET 6820.0028
GLY 6830.0161
GLU 6840.0125
THR 6850.0113
VAL 6860.0172
ASN 6870.0185
LYS 6880.0165
ILE 6890.0154
ALA 6900.0094
GLN 6910.0125
GLU 6920.0135
SER 6930.0081
LYS 6940.0061
ASN 6950.0070
ILE 6960.0064
TRP 6970.0028
LYS 6980.0026
LEU 6990.0031
GLN 7000.0039
ARG 7010.0072
ALA 7020.0070
ILE 7030.0075
THR 7040.0083
ILE 7050.0098
LEU 7060.0104
ASP 7070.0091
THR 7080.0084
GLU 7090.0113
LYS 7100.0148
SER 7110.0149
PHE 7120.0157
LEU 7130.0192
LYS 7140.0054
CYS 7150.0173
MET 7160.0113
ARG 7170.0156
LYS 7180.0355
ALA 7190.0141
PHE 7200.0118
ARG 7210.0094
SER 7220.0162
GLY 7230.0126
LYS 7240.0132
LEU 7250.0157
LEU 7260.0153
TYR 7380.0091
ARG 7390.0095
TRP 7400.0098
CYS 7410.0112
PHE 7420.0085
ARG 7430.0082
VAL 7440.0122
ASP 7450.0113
GLU 7460.0133

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.