CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200345243697656

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0465
VAL 2830.0310
GLY 2840.0266
ASN 2850.0228
THR 2860.0206
VAL 2870.0222
LEU 2880.0177
HIS 2890.0184
ALA 2900.0232
LEU 2910.0219
VAL 2920.0185
GLU 2930.0229
VAL 2940.0262
ALA 2950.0231
ASP 2960.0236
ASN 2970.0193
THR 2980.0250
VAL 2990.0265
ASP 3000.0309
ASN 3010.0276
THR 3020.0231
LYS 3030.0264
PHE 3040.0284
VAL 3050.0238
THR 3060.0220
SER 3070.0264
MET 3080.0251
TYR 3090.0201
ASN 3100.0225
GLU 3110.0252
ILE 3120.0216
LEU 3130.0183
ILE 3140.0223
LEU 3150.0227
GLY 3160.0175
ALA 3170.0174
LYS 3180.0212
LEU 3190.0193
HIS 3200.0139
PRO 3210.0133
THR 3220.0086
LEU 3230.0073
LYS 3240.0071
LEU 3250.0098
GLU 3260.0081
GLU 3270.0067
ILE 3280.0106
THR 3290.0137
ASN 3300.0183
ARG 3310.0226
LYS 3320.0221
GLY 3330.0174
LEU 3340.0142
THR 3350.0105
PRO 3360.0116
LEU 3370.0077
ALA 3380.0095
LEU 3390.0133
ALA 3400.0108
ALA 3410.0089
SER 3420.0123
SER 3430.0156
GLY 3440.0126
LYS 3450.0128
ILE 3460.0104
GLY 3470.0135
VAL 3480.0134
LEU 3490.0094
ALA 3500.0100
TYR 3510.0132
ILE 3520.0104
LEU 3530.0078
GLN 3540.0120
ARG 3550.0150
GLU 3560.0182
ILE 3570.0201
HIS 3580.0253
GLU 3590.0280
PRO 3600.0289
GLU 3610.0232
CYS 3620.0205
ARG 3630.0203
HIS 3640.0154
LEU 3650.0132
SER 3660.0143
ARG 3670.0107
LYS 3680.0143
PHE 3690.0193
THR 3700.0241
GLU 3710.0283
TRP 3720.0324
ALA 3730.0349
TYR 3740.0375
GLY 3750.0390
PRO 3760.0336
VAL 3770.0284
HIS 3780.0263
SER 3790.0242
SER 3800.0194
LEU 3810.0171
TYR 3820.0117
ASP 3830.0097
LEU 3840.0085
SER 3850.0071
CYS 3860.0073
ILE 3870.0066
ASP 3880.0100
THR 3890.0121
CYS 3900.0113
GLU 3910.0158
LYS 3920.0154
ASN 3930.0136
SER 3940.0093
VAL 3950.0070
LEU 3960.0083
GLU 3970.0112
VAL 3980.0110
ILE 3990.0094
ALA 4000.0102
TYR 4010.0119
SER 4020.0117
SER 4030.0117
SER 4040.0112
GLU 4050.0117
THR 4060.0130
PRO 4070.0129
ASN 4080.0099
ARG 4090.0087
HIS 4100.0081
ASP 4110.0059
MET 4120.0064
LEU 4130.0043
LEU 4140.0032
VAL 4150.0057
GLU 4160.0067
PRO 4170.0059
LEU 4180.0045
ASN 4190.0045
ARG 4200.0070
LEU 4210.0080
LEU 4220.0076
GLN 4230.0075
ASP 4240.0092
LYS 4250.0100
TRP 4260.0096
ASP 4270.0096
ARG 4280.0114
PHE 4290.0125
VAL 4300.0112
LYS 4310.0102
ARG 4320.0109
ILE 4330.0122
PHE 4340.0117
TYR 4350.0115
PHE 4360.0115
ASN 4370.0115
PHE 4380.0117
PHE 4390.0121
VAL 4400.0108
TYR 4410.0105
CYS 4420.0124
LEU 4430.0125
TYR 4440.0105
MET 4450.0103
ILE 4460.0120
ILE 4470.0122
PHE 4480.0089
THR 4490.0079
ALA 4500.0119
ALA 4510.0132
ALA 4520.0092
TYR 4530.0102
TYR 4540.0174
ARG 4550.0184
PRO 4560.0246
VAL 4570.0272
GLU 4580.0333
GLY 4590.0352
LEU 4600.0354
PRO 4610.0302
PRO 4620.0299
TYR 4630.0335
LYS 4640.0383
LEU 4650.0375
LYS 4660.0422
ASN 4670.0465
THR 4680.0442
VAL 4690.0416
GLY 4700.0353
ASP 4710.0336
TYR 4720.0349
PHE 4730.0305
ARG 4740.0249
VAL 4750.0244
THR 4760.0244
GLY 4770.0189
GLU 4780.0153
ILE 4790.0160
LEU 4800.0154
SER 4810.0094
VAL 4820.0073
SER 4830.0099
GLY 4840.0092
GLY 4850.0054
VAL 4860.0057
TYR 4870.0093
PHE 4880.0096
PHE 4890.0086
PHE 4900.0104
ARG 4910.0121
GLY 4920.0121
ILE 4930.0117
GLN 4940.0123
TYR 4950.0124
PHE 4960.0125
LEU 4970.0130
GLN 4980.0133
ARG 4990.0128
ARG 5000.0128
PRO 5010.0127
SER 5020.0130
LEU 5030.0143
LYS 5040.0130
SER 5050.0107
LEU 5060.0115
PHE 5070.0108
VAL 5080.0105
ASP 5090.0101
SER 5100.0109
TYR 5110.0109
SER 5120.0109
GLU 5130.0112
ILE 5140.0110
LEU 5150.0108
PHE 5160.0106
PHE 5170.0101
VAL 5180.0090
GLN 5190.0070
SER 5200.0056
LEU 5210.0060
PHE 5220.0056
MET 5230.0031
LEU 5240.0041
VAL 5250.0092
SER 5260.0101
VAL 5270.0116
VAL 5280.0148
LEU 5290.0199
TYR 5300.0204
PHE 5310.0238
SER 5320.0267
GLN 5330.0310
ARG 5340.0286
LYS 5350.0262
GLU 5360.0227
TYR 5370.0170
VAL 5380.0142
ALA 5390.0149
SER 5400.0110
MET 5410.0064
VAL 5420.0053
PHE 5430.0072
SER 5440.0039
LEU 5450.0034
ALA 5460.0055
MET 5470.0077
GLY 5480.0077
TRP 5490.0094
THR 5500.0100
ASN 5510.0105
MET 5520.0118
LEU 5530.0117
TYR 5540.0117
TYR 5550.0120
THR 5560.0116
ARG 5570.0113
GLY 5580.0110
PHE 5590.0112
GLN 5600.0112
GLN 5610.0113
MET 5620.0114
GLY 5630.0113
ILE 5640.0114
TYR 5650.0112
ALA 5660.0110
VAL 5670.0112
MET 5680.0106
ILE 5690.0098
GLU 5700.0102
LYS 5710.0109
MET 5720.0094
ILE 5730.0087
LEU 5740.0102
ARG 5750.0119
ASP 5760.0105
LEU 5770.0086
CYS 5780.0101
ARG 5790.0124
PHE 5800.0115
MET 5810.0108
PHE 5820.0119
VAL 5830.0128
TYR 5840.0124
LEU 5850.0122
VAL 5860.0129
PHE 5870.0129
LEU 5880.0129
PHE 5890.0133
GLY 5900.0131
PHE 5910.0130
SER 5920.0134
THR 5930.0135
ALA 5940.0131
VAL 5950.0133
VAL 5960.0138
THR 5970.0136
LEU 5980.0135
ILE 5990.0137
GLU 6000.0140
ASP 6010.0143
SER 6260.0146
TYR 6270.0143
ASN 6280.0144
SER 6290.0147
LEU 6300.0144
TYR 6310.0148
SER 6320.0144
THR 6330.0139
CYS 6340.0140
LEU 6350.0140
GLU 6360.0135
LEU 6370.0132
PHE 6380.0134
LYS 6390.0132
PHE 6400.0128
THR 6410.0127
ILE 6420.0130
GLY 6430.0128
MET 6440.0130
GLY 6450.0130
ASP 6460.0129
LEU 6470.0128
GLU 6480.0129
PHE 6490.0133
THR 6500.0135
GLU 6510.0134
ASN 6520.0137
TYR 6530.0135
ASP 6540.0132
PHE 6550.0128
LYS 6560.0126
ALA 6570.0123
VAL 6580.0126
PHE 6590.0128
ILE 6600.0125
ILE 6610.0123
LEU 6620.0126
LEU 6630.0127
LEU 6640.0123
ALA 6650.0123
TYR 6660.0125
VAL 6670.0123
ILE 6680.0121
LEU 6690.0123
THR 6700.0122
TYR 6710.0119
ILE 6720.0119
LEU 6730.0121
LEU 6740.0119
LEU 6750.0111
ASN 6760.0112
MET 6770.0118
LEU 6780.0106
ILE 6790.0099
ALA 6800.0109
LEU 6810.0118
MET 6820.0102
GLY 6830.0097
GLU 6840.0120
THR 6850.0118
VAL 6860.0107
ASN 6870.0122
LYS 6880.0137
ILE 6890.0120
ALA 6900.0118
GLN 6910.0133
GLU 6920.0115
SER 6930.0111
LYS 6940.0116
ASN 6950.0098
ILE 6960.0105
TRP 6970.0105
LYS 6980.0087
LEU 6990.0095
GLN 7000.0109
ARG 7010.0101
ALA 7020.0097
ILE 7030.0114
THR 7040.0119
ILE 7050.0111
LEU 7060.0117
ASP 7070.0134
THR 7080.0135
GLU 7090.0135
LYS 7100.0145
SER 7110.0173
PHE 7120.0175
LEU 7130.0208
LYS 7140.0230
CYS 7150.0252
MET 7160.0243
ARG 7170.0212
LYS 7180.0210
ALA 7190.0183
PHE 7200.0162
ARG 7210.0142
SER 7220.0172
GLY 7230.0184
LYS 7240.0231
LEU 7250.0237
LEU 7260.0217
TYR 7380.0176
ARG 7390.0136
TRP 7400.0149
CYS 7410.0155
PHE 7420.0145
ARG 7430.0175
VAL 7440.0157
ASP 7450.0201
GLU 7460.0183

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.