CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200345243697656

---  normal mode 13  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0506
VAL 2830.0417
GLY 2840.0389
ASN 2850.0316
THR 2860.0267
VAL 2870.0229
LEU 2880.0179
HIS 2890.0204
ALA 2900.0233
LEU 2910.0183
VAL 2920.0177
GLU 2930.0239
VAL 2940.0241
ALA 2950.0217
ASP 2960.0248
ASN 2970.0220
THR 2980.0264
VAL 2990.0248
ASP 3000.0250
ASN 3010.0225
THR 3020.0177
LYS 3030.0159
PHE 3040.0161
VAL 3050.0144
THR 3060.0091
SER 3070.0084
MET 3080.0113
TYR 3090.0083
ASN 3100.0041
GLU 3110.0082
ILE 3120.0130
LEU 3130.0112
ILE 3140.0123
LEU 3150.0166
GLY 3160.0197
ALA 3170.0200
LYS 3180.0226
LEU 3190.0266
HIS 3200.0281
PRO 3210.0271
THR 3220.0298
LEU 3230.0269
LYS 3240.0215
LEU 3250.0185
GLU 3260.0148
GLU 3270.0185
ILE 3280.0221
THR 3290.0232
ASN 3300.0266
ARG 3310.0333
LYS 3320.0290
GLY 3330.0240
LEU 3340.0187
THR 3350.0154
PRO 3360.0141
LEU 3370.0092
ALA 3380.0114
LEU 3390.0156
ALA 3400.0135
ALA 3410.0120
SER 3420.0140
SER 3430.0169
GLY 3440.0160
LYS 3450.0163
ILE 3460.0141
GLY 3470.0142
VAL 3480.0116
LEU 3490.0091
ALA 3500.0093
TYR 3510.0066
ILE 3520.0036
LEU 3530.0028
GLN 3540.0053
ARG 3550.0043
GLU 3560.0095
ILE 3570.0116
HIS 3580.0178
GLU 3590.0191
PRO 3600.0238
GLU 3610.0239
CYS 3620.0181
ARG 3630.0183
HIS 3640.0191
LEU 3650.0137
SER 3660.0105
ARG 3670.0061
LYS 3680.0087
PHE 3690.0137
THR 3700.0178
GLU 3710.0219
TRP 3720.0258
ALA 3730.0275
TYR 3740.0312
GLY 3750.0332
PRO 3760.0320
VAL 3770.0264
HIS 3780.0219
SER 3790.0187
SER 3800.0139
LEU 3810.0112
TYR 3820.0060
ASP 3830.0051
LEU 3840.0032
SER 3850.0052
CYS 3860.0065
ILE 3870.0038
ASP 3880.0038
THR 3890.0053
CYS 3900.0076
GLU 3910.0096
LYS 3920.0122
ASN 3930.0105
SER 3940.0072
VAL 3950.0074
LEU 3960.0077
GLU 3970.0084
VAL 3980.0101
ILE 3990.0106
ALA 4000.0093
TYR 4010.0089
SER 4020.0096
SER 4030.0102
SER 4040.0092
GLU 4050.0125
THR 4060.0143
PRO 4070.0158
ASN 4080.0141
ARG 4090.0107
HIS 4100.0107
ASP 4110.0116
MET 4120.0121
LEU 4130.0107
LEU 4140.0116
VAL 4150.0106
GLU 4160.0097
PRO 4170.0058
LEU 4180.0069
ASN 4190.0098
ARG 4200.0083
LEU 4210.0056
LEU 4220.0067
GLN 4230.0073
ASP 4240.0057
LYS 4250.0061
TRP 4260.0068
ASP 4270.0069
ARG 4280.0059
PHE 4290.0072
VAL 4300.0078
LYS 4310.0076
ARG 4320.0087
ILE 4330.0096
PHE 4340.0081
TYR 4350.0088
PHE 4360.0133
ASN 4370.0103
PHE 4380.0084
PHE 4390.0130
VAL 4400.0131
TYR 4410.0081
CYS 4420.0123
LEU 4430.0162
TYR 4440.0109
MET 4450.0101
ILE 4460.0174
ILE 4470.0161
PHE 4480.0095
THR 4490.0165
ALA 4500.0216
ALA 4510.0161
ALA 4520.0164
TYR 4530.0275
TYR 4540.0278
ARG 4550.0196
PRO 4560.0198
VAL 4570.0289
GLU 4580.0233
GLY 4590.0281
LEU 4600.0264
PRO 4610.0183
PRO 4620.0139
TYR 4630.0030
LYS 4640.0122
LEU 4650.0219
LYS 4660.0311
ASN 4670.0450
THR 4680.0490
VAL 4690.0506
GLY 4700.0435
ASP 4710.0310
TYR 4720.0354
PHE 4730.0337
ARG 4740.0223
VAL 4750.0173
THR 4760.0236
GLY 4770.0166
GLU 4780.0080
ILE 4790.0150
LEU 4800.0154
SER 4810.0067
VAL 4820.0113
SER 4830.0173
GLY 4840.0114
GLY 4850.0119
VAL 4860.0191
TYR 4870.0172
PHE 4880.0133
PHE 4890.0186
PHE 4900.0214
ARG 4910.0173
GLY 4920.0165
ILE 4930.0227
GLN 4940.0230
TYR 4950.0177
PHE 4960.0195
LEU 4970.0239
GLN 4980.0221
ARG 4990.0179
ARG 5000.0210
PRO 5010.0180
SER 5020.0210
LEU 5030.0215
LYS 5040.0205
SER 5050.0148
LEU 5060.0153
PHE 5070.0126
VAL 5080.0086
ASP 5090.0064
SER 5100.0087
TYR 5110.0087
SER 5120.0068
GLU 5130.0096
ILE 5140.0135
LEU 5150.0112
PHE 5160.0094
PHE 5170.0154
VAL 5180.0176
GLN 5190.0126
SER 5200.0144
LEU 5210.0218
PHE 5220.0203
MET 5230.0148
LEU 5240.0217
VAL 5250.0269
SER 5260.0214
VAL 5270.0206
VAL 5280.0308
LEU 5290.0312
TYR 5300.0211
PHE 5310.0268
SER 5320.0366
GLN 5330.0320
ARG 5340.0356
LYS 5350.0331
GLU 5360.0370
TYR 5370.0264
VAL 5380.0255
ALA 5390.0324
SER 5400.0262
MET 5410.0173
VAL 5420.0213
PHE 5430.0221
SER 5440.0140
LEU 5450.0134
ALA 5460.0194
MET 5470.0137
GLY 5480.0076
TRP 5490.0123
THR 5500.0112
ASN 5510.0060
MET 5520.0058
LEU 5530.0037
TYR 5540.0007
TYR 5550.0036
THR 5560.0038
ARG 5570.0027
GLY 5580.0056
PHE 5590.0067
GLN 5600.0078
GLN 5610.0086
MET 5620.0070
GLY 5630.0040
ILE 5640.0048
TYR 5650.0059
ALA 5660.0033
VAL 5670.0021
MET 5680.0061
ILE 5690.0073
GLU 5700.0065
LYS 5710.0073
MET 5720.0100
ILE 5730.0115
LEU 5740.0112
ARG 5750.0121
ASP 5760.0134
LEU 5770.0140
CYS 5780.0145
ARG 5790.0151
PHE 5800.0151
MET 5810.0143
PHE 5820.0141
VAL 5830.0136
TYR 5840.0129
LEU 5850.0124
VAL 5860.0109
PHE 5870.0092
LEU 5880.0092
PHE 5890.0093
GLY 5900.0069
PHE 5910.0035
SER 5920.0059
THR 5930.0086
ALA 5940.0060
VAL 5950.0056
VAL 5960.0094
THR 5970.0126
LEU 5980.0122
ILE 5990.0125
GLU 6000.0166
ASP 6010.0187
SER 6260.0109
TYR 6270.0086
ASN 6280.0130
SER 6290.0140
LEU 6300.0127
TYR 6310.0136
SER 6320.0094
THR 6330.0063
CYS 6340.0092
LEU 6350.0096
GLU 6360.0054
LEU 6370.0063
PHE 6380.0106
LYS 6390.0108
PHE 6400.0111
THR 6410.0138
ILE 6420.0163
GLY 6430.0160
MET 6440.0134
GLY 6450.0097
ASP 6460.0085
LEU 6470.0085
GLU 6480.0087
PHE 6490.0047
THR 6500.0074
GLU 6510.0125
ASN 6520.0140
TYR 6530.0146
ASP 6540.0176
PHE 6550.0174
LYS 6560.0157
ALA 6570.0159
VAL 6580.0121
PHE 6590.0088
ILE 6600.0101
ILE 6610.0095
LEU 6620.0043
LEU 6630.0050
LEU 6640.0089
ALA 6650.0066
TYR 6660.0063
VAL 6670.0095
ILE 6680.0105
LEU 6690.0098
THR 6700.0114
TYR 6710.0129
ILE 6720.0135
LEU 6730.0123
LEU 6740.0135
LEU 6750.0148
ASN 6760.0153
MET 6770.0156
LEU 6780.0155
ILE 6790.0157
ALA 6800.0164
LEU 6810.0161
MET 6820.0146
GLY 6830.0150
GLU 6840.0155
THR 6850.0125
VAL 6860.0087
ASN 6870.0106
LYS 6880.0078
ILE 6890.0037
ALA 6900.0052
GLN 6910.0051
GLU 6920.0038
SER 6930.0034
LYS 6940.0069
ASN 6950.0083
ILE 6960.0071
TRP 6970.0070
LYS 6980.0090
LEU 6990.0088
GLN 7000.0073
ARG 7010.0081
ALA 7020.0083
ILE 7030.0081
THR 7040.0079
ILE 7050.0078
LEU 7060.0078
ASP 7070.0085
THR 7080.0086
GLU 7090.0082
LYS 7100.0101
SER 7110.0092
PHE 7120.0091
LEU 7130.0102
LYS 7140.0071
CYS 7150.0065
MET 7160.0036
ARG 7170.0052
LYS 7180.0016
ALA 7190.0040
PHE 7200.0024
ARG 7210.0025
SER 7220.0049
GLY 7230.0076
LYS 7240.0116
LEU 7250.0155
LEU 7260.0167
TYR 7380.0140
ARG 7390.0107
TRP 7400.0073
CYS 7410.0087
PHE 7420.0067
ARG 7430.0103
VAL 7440.0117
ASP 7450.0168
GLU 7460.0184

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.