CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200345243697656

---  normal mode 47  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0903
VAL 2830.0903
GLY 2840.0608
ASN 2850.0360
THR 2860.0195
VAL 2870.0183
LEU 2880.0132
HIS 2890.0141
ALA 2900.0153
LEU 2910.0154
VAL 2920.0107
GLU 2930.0116
VAL 2940.0098
ALA 2950.0067
ASP 2960.0150
ASN 2970.0122
THR 2980.0308
VAL 2990.0428
ASP 3000.0346
ASN 3010.0137
THR 3020.0184
LYS 3030.0270
PHE 3040.0177
VAL 3050.0155
THR 3060.0185
SER 3070.0203
MET 3080.0195
TYR 3090.0145
ASN 3100.0104
GLU 3110.0107
ILE 3120.0085
LEU 3130.0063
ILE 3140.0146
LEU 3150.0173
GLY 3160.0169
ALA 3170.0150
LYS 3180.0209
LEU 3190.0265
HIS 3200.0316
PRO 3210.0224
THR 3220.0309
LEU 3230.0248
LYS 3240.0154
LEU 3250.0159
GLU 3260.0152
GLU 3270.0151
ILE 3280.0286
THR 3290.0266
ASN 3300.0196
ARG 3310.0261
LYS 3320.0472
GLY 3330.0528
LEU 3340.0235
THR 3350.0196
PRO 3360.0126
LEU 3370.0079
ALA 3380.0107
LEU 3390.0095
ALA 3400.0068
ALA 3410.0066
SER 3420.0082
SER 3430.0093
GLY 3440.0078
LYS 3450.0065
ILE 3460.0037
GLY 3470.0055
VAL 3480.0063
LEU 3490.0031
ALA 3500.0046
TYR 3510.0053
ILE 3520.0024
LEU 3530.0027
GLN 3540.0046
ARG 3550.0067
GLU 3560.0081
ILE 3570.0093
HIS 3580.0179
GLU 3590.0243
PRO 3600.0213
GLU 3610.0118
CYS 3620.0139
ARG 3630.0086
HIS 3640.0077
LEU 3650.0092
SER 3660.0078
ARG 3670.0068
LYS 3680.0073
PHE 3690.0077
THR 3700.0127
GLU 3710.0119
TRP 3720.0119
ALA 3730.0246
TYR 3740.0184
GLY 3750.0234
PRO 3760.0200
VAL 3770.0179
HIS 3780.0162
SER 3790.0111
SER 3800.0101
LEU 3810.0099
TYR 3820.0047
ASP 3830.0049
LEU 3840.0048
SER 3850.0019
CYS 3860.0008
ILE 3870.0013
ASP 3880.0026
THR 3890.0038
CYS 3900.0093
GLU 3910.0255
LYS 3920.0283
ASN 3930.0177
SER 3940.0037
VAL 3950.0032
LEU 3960.0040
GLU 3970.0063
VAL 3980.0049
ILE 3990.0046
ALA 4000.0027
TYR 4010.0035
SER 4020.0038
SER 4030.0061
SER 4040.0064
GLU 4050.0051
THR 4060.0059
PRO 4070.0047
ASN 4080.0035
ARG 4090.0065
HIS 4100.0070
ASP 4110.0052
MET 4120.0028
LEU 4130.0053
LEU 4140.0043
VAL 4150.0032
GLU 4160.0047
PRO 4170.0059
LEU 4180.0059
ASN 4190.0058
ARG 4200.0077
LEU 4210.0090
LEU 4220.0096
GLN 4230.0112
ASP 4240.0123
LYS 4250.0111
TRP 4260.0117
ASP 4270.0147
ARG 4280.0134
PHE 4290.0107
VAL 4300.0106
LYS 4310.0127
ARG 4320.0123
ILE 4330.0114
PHE 4340.0105
TYR 4350.0115
PHE 4360.0156
ASN 4370.0143
PHE 4380.0096
PHE 4390.0145
VAL 4400.0165
TYR 4410.0112
CYS 4420.0110
LEU 4430.0135
TYR 4440.0115
MET 4450.0075
ILE 4460.0084
ILE 4470.0077
PHE 4480.0068
THR 4490.0067
ALA 4500.0071
ALA 4510.0034
ALA 4520.0053
TYR 4530.0121
TYR 4540.0118
ARG 4550.0106
PRO 4560.0109
VAL 4570.0126
GLU 4580.0132
GLY 4590.0138
LEU 4600.0139
PRO 4610.0144
PRO 4620.0178
TYR 4630.0138
LYS 4640.0102
LEU 4650.0048
LYS 4660.0045
ASN 4670.0101
THR 4680.0148
VAL 4690.0166
GLY 4700.0169
ASP 4710.0108
TYR 4720.0111
PHE 4730.0157
ARG 4740.0144
VAL 4750.0112
THR 4760.0099
GLY 4770.0058
GLU 4780.0071
ILE 4790.0087
LEU 4800.0077
SER 4810.0079
VAL 4820.0094
SER 4830.0128
GLY 4840.0110
GLY 4850.0083
VAL 4860.0101
TYR 4870.0108
PHE 4880.0069
PHE 4890.0054
PHE 4900.0080
ARG 4910.0102
GLY 4920.0079
ILE 4930.0076
GLN 4940.0098
TYR 4950.0103
PHE 4960.0098
LEU 4970.0125
GLN 4980.0127
ARG 4990.0116
ARG 5000.0159
PRO 5010.0134
SER 5020.0182
LEU 5030.0167
LYS 5040.0167
SER 5050.0139
LEU 5060.0124
PHE 5070.0135
VAL 5080.0137
ASP 5090.0121
SER 5100.0113
TYR 5110.0093
SER 5120.0079
GLU 5130.0046
ILE 5140.0050
LEU 5150.0036
PHE 5160.0025
PHE 5170.0030
VAL 5180.0045
GLN 5190.0031
SER 5200.0043
LEU 5210.0066
PHE 5220.0081
MET 5230.0068
LEU 5240.0094
VAL 5250.0111
SER 5260.0105
VAL 5270.0122
VAL 5280.0109
LEU 5290.0054
TYR 5300.0098
PHE 5310.0104
SER 5320.0059
GLN 5330.0102
ARG 5340.0048
LYS 5350.0051
GLU 5360.0035
TYR 5370.0069
VAL 5380.0075
ALA 5390.0069
SER 5400.0086
MET 5410.0068
VAL 5420.0065
PHE 5430.0066
SER 5440.0049
LEU 5450.0044
ALA 5460.0024
MET 5470.0023
GLY 5480.0036
TRP 5490.0030
THR 5500.0038
ASN 5510.0029
MET 5520.0035
LEU 5530.0080
TYR 5540.0084
TYR 5550.0081
THR 5560.0101
ARG 5570.0106
GLY 5580.0114
PHE 5590.0114
GLN 5600.0116
GLN 5610.0115
MET 5620.0129
GLY 5630.0129
ILE 5640.0134
TYR 5650.0138
ALA 5660.0135
VAL 5670.0132
MET 5680.0103
ILE 5690.0101
GLU 5700.0103
LYS 5710.0113
MET 5720.0071
ILE 5730.0105
LEU 5740.0124
ARG 5750.0048
ASP 5760.0041
LEU 5770.0162
CYS 5780.0265
ARG 5790.0259
PHE 5800.0214
MET 5810.0208
PHE 5820.0214
VAL 5830.0133
TYR 5840.0101
LEU 5850.0087
VAL 5860.0110
PHE 5870.0109
LEU 5880.0089
PHE 5890.0195
GLY 5900.0219
PHE 5910.0175
SER 5920.0171
THR 5930.0195
ALA 5940.0167
VAL 5950.0086
VAL 5960.0029
THR 5970.0093
LEU 5980.0198
ILE 5990.0168
GLU 6000.0318
ASP 6010.0498
SER 6260.0304
TYR 6270.0168
ASN 6280.0150
SER 6290.0108
LEU 6300.0183
TYR 6310.0292
SER 6320.0165
THR 6330.0113
CYS 6340.0188
LEU 6350.0141
GLU 6360.0106
LEU 6370.0093
PHE 6380.0081
LYS 6390.0124
PHE 6400.0067
THR 6410.0175
ILE 6420.0291
GLY 6430.0285
MET 6440.0187
GLY 6450.0039
ASP 6460.0120
LEU 6470.0182
GLU 6480.0196
PHE 6490.0180
THR 6500.0188
GLU 6510.0143
ASN 6520.0209
TYR 6530.0152
ASP 6540.0183
PHE 6550.0254
LYS 6560.0222
ALA 6570.0359
VAL 6580.0281
PHE 6590.0135
ILE 6600.0202
ILE 6610.0213
LEU 6620.0102
LEU 6630.0111
LEU 6640.0127
ALA 6650.0171
TYR 6660.0113
VAL 6670.0100
ILE 6680.0256
LEU 6690.0232
THR 6700.0165
TYR 6710.0219
ILE 6720.0308
LEU 6730.0269
LEU 6740.0186
LEU 6750.0194
ASN 6760.0197
MET 6770.0149
LEU 6780.0133
ILE 6790.0235
ALA 6800.0340
LEU 6810.0320
MET 6820.0322
GLY 6830.0304
GLU 6840.0255
THR 6850.0343
VAL 6860.0207
ASN 6870.0273
LYS 6880.0429
ILE 6890.0235
ALA 6900.0166
GLN 6910.0226
GLU 6920.0201
SER 6930.0157
LYS 6940.0143
ASN 6950.0119
ILE 6960.0131
TRP 6970.0126
LYS 6980.0099
LEU 6990.0096
GLN 7000.0103
ARG 7010.0099
ALA 7020.0087
ILE 7030.0082
THR 7040.0097
ILE 7050.0088
LEU 7060.0065
ASP 7070.0065
THR 7080.0069
GLU 7090.0054
LYS 7100.0033
SER 7110.0053
PHE 7120.0050
LEU 7130.0147
LYS 7140.0183
CYS 7150.0160
MET 7160.0135
ARG 7170.0150
LYS 7180.0164
ALA 7190.0063
PHE 7200.0079
ARG 7210.0095
SER 7220.0045
GLY 7230.0047
LYS 7240.0110
LEU 7250.0148
LEU 7260.0184
TYR 7380.0067
ARG 7390.0074
TRP 7400.0032
CYS 7410.0086
PHE 7420.0079
ARG 7430.0078
VAL 7440.0115
ASP 7450.0137
GLU 7460.0137

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.