CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200345243697656

---  normal mode 51  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0493
VAL 2830.0399
GLY 2840.0259
ASN 2850.0167
THR 2860.0082
VAL 2870.0097
LEU 2880.0077
HIS 2890.0078
ALA 2900.0105
LEU 2910.0115
VAL 2920.0072
GLU 2930.0074
VAL 2940.0096
ALA 2950.0053
ASP 2960.0018
ASN 2970.0040
THR 2980.0176
VAL 2990.0258
ASP 3000.0170
ASN 3010.0037
THR 3020.0088
LYS 3030.0115
PHE 3040.0138
VAL 3050.0123
THR 3060.0143
SER 3070.0186
MET 3080.0167
TYR 3090.0126
ASN 3100.0153
GLU 3110.0170
ILE 3120.0119
LEU 3130.0064
ILE 3140.0080
LEU 3150.0065
GLY 3160.0047
ALA 3170.0064
LYS 3180.0063
LEU 3190.0052
HIS 3200.0046
PRO 3210.0064
THR 3220.0085
LEU 3230.0060
LYS 3240.0060
LEU 3250.0036
GLU 3260.0044
GLU 3270.0050
ILE 3280.0065
THR 3290.0060
ASN 3300.0043
ARG 3310.0138
LYS 3320.0219
GLY 3330.0178
LEU 3340.0040
THR 3350.0032
PRO 3360.0038
LEU 3370.0048
ALA 3380.0041
LEU 3390.0029
ALA 3400.0045
ALA 3410.0050
SER 3420.0044
SER 3430.0036
GLY 3440.0039
LYS 3450.0037
ILE 3460.0032
GLY 3470.0028
VAL 3480.0032
LEU 3490.0040
ALA 3500.0049
TYR 3510.0051
ILE 3520.0046
LEU 3530.0038
GLN 3540.0037
ARG 3550.0058
GLU 3560.0059
ILE 3570.0070
HIS 3580.0184
GLU 3590.0164
PRO 3600.0045
GLU 3610.0093
CYS 3620.0091
ARG 3630.0029
HIS 3640.0053
LEU 3650.0063
SER 3660.0035
ARG 3670.0034
LYS 3680.0047
PHE 3690.0071
THR 3700.0138
GLU 3710.0137
TRP 3720.0084
ALA 3730.0141
TYR 3740.0148
GLY 3750.0211
PRO 3760.0045
VAL 3770.0092
HIS 3780.0104
SER 3790.0106
SER 3800.0096
LEU 3810.0087
TYR 3820.0046
ASP 3830.0047
LEU 3840.0043
SER 3850.0071
CYS 3860.0073
ILE 3870.0062
ASP 3880.0066
THR 3890.0078
CYS 3900.0103
GLU 3910.0154
LYS 3920.0107
ASN 3930.0093
SER 3940.0081
VAL 3950.0072
LEU 3960.0064
GLU 3970.0074
VAL 3980.0072
ILE 3990.0060
ALA 4000.0085
TYR 4010.0074
SER 4020.0069
SER 4030.0062
SER 4040.0091
GLU 4050.0139
THR 4060.0066
PRO 4070.0056
ASN 4080.0032
ARG 4090.0035
HIS 4100.0042
ASP 4110.0025
MET 4120.0016
LEU 4130.0016
LEU 4140.0038
VAL 4150.0036
GLU 4160.0031
PRO 4170.0017
LEU 4180.0019
ASN 4190.0008
ARG 4200.0022
LEU 4210.0010
LEU 4220.0016
GLN 4230.0032
ASP 4240.0017
LYS 4250.0012
TRP 4260.0030
ASP 4270.0025
ARG 4280.0015
PHE 4290.0034
VAL 4300.0058
LYS 4310.0066
ARG 4320.0091
ILE 4330.0111
PHE 4340.0116
TYR 4350.0130
PHE 4360.0179
ASN 4370.0163
PHE 4380.0172
PHE 4390.0232
VAL 4400.0192
TYR 4410.0163
CYS 4420.0197
LEU 4430.0172
TYR 4440.0140
MET 4450.0154
ILE 4460.0151
ILE 4470.0153
PHE 4480.0183
THR 4490.0143
ALA 4500.0191
ALA 4510.0212
ALA 4520.0127
TYR 4530.0216
TYR 4540.0274
ARG 4550.0207
PRO 4560.0175
VAL 4570.0233
GLU 4580.0190
GLY 4590.0201
LEU 4600.0183
PRO 4610.0149
PRO 4620.0171
TYR 4630.0088
LYS 4640.0021
LEU 4650.0114
LYS 4660.0247
ASN 4670.0402
THR 4680.0350
VAL 4690.0347
GLY 4700.0187
ASP 4710.0132
TYR 4720.0264
PHE 4730.0291
ARG 4740.0216
VAL 4750.0189
THR 4760.0177
GLY 4770.0124
GLU 4780.0121
ILE 4790.0131
LEU 4800.0081
SER 4810.0054
VAL 4820.0066
SER 4830.0114
GLY 4840.0125
GLY 4850.0124
VAL 4860.0148
TYR 4870.0144
PHE 4880.0121
PHE 4890.0129
PHE 4900.0165
ARG 4910.0153
GLY 4920.0110
ILE 4930.0165
GLN 4940.0206
TYR 4950.0175
PHE 4960.0158
LEU 4970.0232
GLN 4980.0279
ARG 4990.0232
ARG 5000.0239
PRO 5010.0211
SER 5020.0255
LEU 5030.0113
LYS 5040.0229
SER 5050.0130
LEU 5060.0091
PHE 5070.0064
VAL 5080.0077
ASP 5090.0059
SER 5100.0068
TYR 5110.0058
SER 5120.0065
GLU 5130.0037
ILE 5140.0055
LEU 5150.0064
PHE 5160.0047
PHE 5170.0108
VAL 5180.0120
GLN 5190.0125
SER 5200.0140
LEU 5210.0148
PHE 5220.0159
MET 5230.0134
LEU 5240.0151
VAL 5250.0140
SER 5260.0126
VAL 5270.0145
VAL 5280.0123
LEU 5290.0048
TYR 5300.0068
PHE 5310.0068
SER 5320.0044
GLN 5330.0129
ARG 5340.0106
LYS 5350.0085
GLU 5360.0043
TYR 5370.0057
VAL 5380.0065
ALA 5390.0063
SER 5400.0122
MET 5410.0117
VAL 5420.0124
PHE 5430.0152
SER 5440.0152
LEU 5450.0146
ALA 5460.0145
MET 5470.0164
GLY 5480.0164
TRP 5490.0168
THR 5500.0159
ASN 5510.0139
MET 5520.0151
LEU 5530.0157
TYR 5540.0158
TYR 5550.0125
THR 5560.0210
ARG 5570.0164
GLY 5580.0121
PHE 5590.0201
GLN 5600.0298
GLN 5610.0478
MET 5620.0419
GLY 5630.0313
ILE 5640.0330
TYR 5650.0388
ALA 5660.0335
VAL 5670.0221
MET 5680.0173
ILE 5690.0230
GLU 5700.0208
LYS 5710.0180
MET 5720.0144
ILE 5730.0139
LEU 5740.0156
ARG 5750.0157
ASP 5760.0115
LEU 5770.0202
CYS 5780.0216
ARG 5790.0193
PHE 5800.0257
MET 5810.0412
PHE 5820.0493
VAL 5830.0317
TYR 5840.0255
LEU 5850.0319
VAL 5860.0239
PHE 5870.0169
LEU 5880.0078
PHE 5890.0061
GLY 5900.0142
PHE 5910.0134
SER 5920.0131
THR 5930.0158
ALA 5940.0122
VAL 5950.0114
VAL 5960.0126
THR 5970.0149
LEU 5980.0163
ILE 5990.0085
GLU 6000.0199
ASP 6010.0317
SER 6260.0226
TYR 6270.0142
ASN 6280.0080
SER 6290.0206
LEU 6300.0242
TYR 6310.0302
SER 6320.0214
THR 6330.0152
CYS 6340.0146
LEU 6350.0131
GLU 6360.0111
LEU 6370.0072
PHE 6380.0046
LYS 6390.0118
PHE 6400.0066
THR 6410.0138
ILE 6420.0198
GLY 6430.0198
MET 6440.0143
GLY 6450.0064
ASP 6460.0142
LEU 6470.0191
GLU 6480.0138
PHE 6490.0140
THR 6500.0183
GLU 6510.0241
ASN 6520.0237
TYR 6530.0223
ASP 6540.0300
PHE 6550.0251
LYS 6560.0086
ALA 6570.0103
VAL 6580.0174
PHE 6590.0121
ILE 6600.0202
ILE 6610.0263
LEU 6620.0189
LEU 6630.0185
LEU 6640.0224
ALA 6650.0165
TYR 6660.0098
VAL 6670.0056
ILE 6680.0045
LEU 6690.0131
THR 6700.0128
TYR 6710.0108
ILE 6720.0132
LEU 6730.0164
LEU 6740.0193
LEU 6750.0205
ASN 6760.0168
MET 6770.0155
LEU 6780.0151
ILE 6790.0192
ALA 6800.0179
LEU 6810.0250
MET 6820.0277
GLY 6830.0163
GLU 6840.0301
THR 6850.0393
VAL 6860.0247
ASN 6870.0074
LYS 6880.0238
ILE 6890.0180
ALA 6900.0195
GLN 6910.0120
GLU 6920.0110
SER 6930.0218
LYS 6940.0226
ASN 6950.0112
ILE 6960.0110
TRP 6970.0146
LYS 6980.0073
LEU 6990.0044
GLN 7000.0075
ARG 7010.0038
ALA 7020.0027
ILE 7030.0054
THR 7040.0063
ILE 7050.0051
LEU 7060.0081
ASP 7070.0098
THR 7080.0082
GLU 7090.0082
LYS 7100.0091
SER 7110.0085
PHE 7120.0053
LEU 7130.0156
LYS 7140.0209
CYS 7150.0227
MET 7160.0147
ARG 7170.0092
LYS 7180.0091
ALA 7190.0027
PHE 7200.0039
ARG 7210.0045
SER 7220.0084
GLY 7230.0062
LYS 7240.0081
LEU 7250.0106
LEU 7260.0087
TYR 7380.0049
ARG 7390.0032
TRP 7400.0050
CYS 7410.0050
PHE 7420.0045
ARG 7430.0073
VAL 7440.0083
ASP 7450.0119
GLU 7460.0123

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.