CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200345243697656

---  normal mode 61  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0690
VAL 2830.0690
GLY 2840.0477
ASN 2850.0168
THR 2860.0168
VAL 2870.0213
LEU 2880.0218
HIS 2890.0172
ALA 2900.0198
LEU 2910.0195
VAL 2920.0169
GLU 2930.0211
VAL 2940.0207
ALA 2950.0184
ASP 2960.0255
ASN 2970.0263
THR 2980.0368
VAL 2990.0442
ASP 3000.0323
ASN 3010.0119
THR 3020.0187
LYS 3030.0195
PHE 3040.0120
VAL 3050.0102
THR 3060.0054
SER 3070.0083
MET 3080.0123
TYR 3090.0103
ASN 3100.0069
GLU 3110.0101
ILE 3120.0130
LEU 3130.0097
ILE 3140.0105
LEU 3150.0148
GLY 3160.0153
ALA 3170.0108
LYS 3180.0208
LEU 3190.0342
HIS 3200.0195
PRO 3210.0146
THR 3220.0221
LEU 3230.0206
LYS 3240.0236
LEU 3250.0202
GLU 3260.0193
GLU 3270.0227
ILE 3280.0171
THR 3290.0137
ASN 3300.0118
ARG 3310.0211
LYS 3320.0222
GLY 3330.0245
LEU 3340.0154
THR 3350.0157
PRO 3360.0174
LEU 3370.0105
ALA 3380.0122
LEU 3390.0131
ALA 3400.0089
ALA 3410.0089
SER 3420.0084
SER 3430.0071
GLY 3440.0102
LYS 3450.0107
ILE 3460.0066
GLY 3470.0080
VAL 3480.0076
LEU 3490.0062
ALA 3500.0068
TYR 3510.0063
ILE 3520.0079
LEU 3530.0069
GLN 3540.0076
ARG 3550.0066
GLU 3560.0066
ILE 3570.0051
HIS 3580.0363
GLU 3590.0358
PRO 3600.0151
GLU 3610.0240
CYS 3620.0203
ARG 3630.0110
HIS 3640.0076
LEU 3650.0066
SER 3660.0085
ARG 3670.0135
LYS 3680.0136
PHE 3690.0141
THR 3700.0348
GLU 3710.0396
TRP 3720.0292
ALA 3730.0074
TYR 3740.0230
GLY 3750.0314
PRO 3760.0140
VAL 3770.0193
HIS 3780.0204
SER 3790.0217
SER 3800.0199
LEU 3810.0193
TYR 3820.0120
ASP 3830.0107
LEU 3840.0084
SER 3850.0057
CYS 3860.0082
ILE 3870.0069
ASP 3880.0048
THR 3890.0050
CYS 3900.0084
GLU 3910.0216
LYS 3920.0186
ASN 3930.0179
SER 3940.0092
VAL 3950.0088
LEU 3960.0064
GLU 3970.0094
VAL 3980.0086
ILE 3990.0092
ALA 4000.0061
TYR 4010.0103
SER 4020.0117
SER 4030.0233
SER 4040.0171
GLU 4050.0269
THR 4060.0104
PRO 4070.0103
ASN 4080.0078
ARG 4090.0062
HIS 4100.0060
ASP 4110.0058
MET 4120.0057
LEU 4130.0043
LEU 4140.0054
VAL 4150.0092
GLU 4160.0081
PRO 4170.0074
LEU 4180.0050
ASN 4190.0047
ARG 4200.0060
LEU 4210.0056
LEU 4220.0064
GLN 4230.0083
ASP 4240.0113
LYS 4250.0104
TRP 4260.0081
ASP 4270.0092
ARG 4280.0108
PHE 4290.0098
VAL 4300.0089
LYS 4310.0024
ARG 4320.0104
ILE 4330.0170
PHE 4340.0117
TYR 4350.0146
PHE 4360.0350
ASN 4370.0310
PHE 4380.0184
PHE 4390.0308
VAL 4400.0343
TYR 4410.0200
CYS 4420.0113
LEU 4430.0145
TYR 4440.0151
MET 4450.0118
ILE 4460.0098
ILE 4470.0110
PHE 4480.0112
THR 4490.0069
ALA 4500.0028
ALA 4510.0131
ALA 4520.0221
TYR 4530.0336
TYR 4540.0243
ARG 4550.0093
PRO 4560.0078
VAL 4570.0140
GLU 4580.0115
GLY 4590.0109
LEU 4600.0086
PRO 4610.0112
PRO 4620.0137
TYR 4630.0078
LYS 4640.0108
LEU 4650.0130
LYS 4660.0146
ASN 4670.0103
THR 4680.0231
VAL 4690.0282
GLY 4700.0356
ASP 4710.0257
TYR 4720.0142
PHE 4730.0207
ARG 4740.0237
VAL 4750.0175
THR 4760.0146
GLY 4770.0148
GLU 4780.0131
ILE 4790.0150
LEU 4800.0117
SER 4810.0127
VAL 4820.0120
SER 4830.0168
GLY 4840.0156
GLY 4850.0115
VAL 4860.0123
TYR 4870.0146
PHE 4880.0099
PHE 4890.0086
PHE 4900.0155
ARG 4910.0121
GLY 4920.0096
ILE 4930.0170
GLN 4940.0168
TYR 4950.0140
PHE 4960.0127
LEU 4970.0130
GLN 4980.0119
ARG 4990.0085
ARG 5000.0058
PRO 5010.0055
SER 5020.0170
LEU 5030.0223
LYS 5040.0369
SER 5050.0160
LEU 5060.0150
PHE 5070.0184
VAL 5080.0205
ASP 5090.0179
SER 5100.0164
TYR 5110.0127
SER 5120.0119
GLU 5130.0103
ILE 5140.0097
LEU 5150.0069
PHE 5160.0035
PHE 5170.0044
VAL 5180.0081
GLN 5190.0083
SER 5200.0050
LEU 5210.0031
PHE 5220.0025
MET 5230.0069
LEU 5240.0076
VAL 5250.0075
SER 5260.0112
VAL 5270.0193
VAL 5280.0211
LEU 5290.0154
TYR 5300.0158
PHE 5310.0211
SER 5320.0221
GLN 5330.0187
ARG 5340.0151
LYS 5350.0123
GLU 5360.0105
TYR 5370.0114
VAL 5380.0080
ALA 5390.0056
SER 5400.0055
MET 5410.0090
VAL 5420.0141
PHE 5430.0119
SER 5440.0108
LEU 5450.0132
ALA 5460.0142
MET 5470.0116
GLY 5480.0120
TRP 5490.0122
THR 5500.0098
ASN 5510.0106
MET 5520.0080
LEU 5530.0062
TYR 5540.0082
TYR 5550.0041
THR 5560.0062
ARG 5570.0069
GLY 5580.0078
PHE 5590.0061
GLN 5600.0069
GLN 5610.0086
MET 5620.0075
GLY 5630.0074
ILE 5640.0068
TYR 5650.0059
ALA 5660.0069
VAL 5670.0062
MET 5680.0032
ILE 5690.0033
GLU 5700.0075
LYS 5710.0102
MET 5720.0103
ILE 5730.0098
LEU 5740.0126
ARG 5750.0167
ASP 5760.0164
LEU 5770.0129
CYS 5780.0096
ARG 5790.0142
PHE 5800.0164
MET 5810.0154
PHE 5820.0217
VAL 5830.0170
TYR 5840.0126
LEU 5850.0147
VAL 5860.0107
PHE 5870.0069
LEU 5880.0078
PHE 5890.0119
GLY 5900.0120
PHE 5910.0082
SER 5920.0056
THR 5930.0077
ALA 5940.0079
VAL 5950.0028
VAL 5960.0034
THR 5970.0034
LEU 5980.0069
ILE 5990.0054
GLU 6000.0080
ASP 6010.0100
SER 6260.0077
TYR 6270.0066
ASN 6280.0082
SER 6290.0077
LEU 6300.0025
TYR 6310.0088
SER 6320.0047
THR 6330.0024
CYS 6340.0044
LEU 6350.0022
GLU 6360.0019
LEU 6370.0027
PHE 6380.0021
LYS 6390.0026
PHE 6400.0034
THR 6410.0057
ILE 6420.0093
GLY 6430.0107
MET 6440.0053
GLY 6450.0036
ASP 6460.0054
LEU 6470.0055
GLU 6480.0032
PHE 6490.0036
THR 6500.0046
GLU 6510.0077
ASN 6520.0049
TYR 6530.0078
ASP 6540.0155
PHE 6550.0164
LYS 6560.0093
ALA 6570.0041
VAL 6580.0063
PHE 6590.0045
ILE 6600.0066
ILE 6610.0098
LEU 6620.0088
LEU 6630.0077
LEU 6640.0092
ALA 6650.0089
TYR 6660.0052
VAL 6670.0048
ILE 6680.0053
LEU 6690.0007
THR 6700.0046
TYR 6710.0075
ILE 6720.0093
LEU 6730.0075
LEU 6740.0088
LEU 6750.0100
ASN 6760.0100
MET 6770.0079
LEU 6780.0056
ILE 6790.0026
ALA 6800.0086
LEU 6810.0143
MET 6820.0206
GLY 6830.0251
GLU 6840.0171
THR 6850.0180
VAL 6860.0278
ASN 6870.0267
LYS 6880.0101
ILE 6890.0080
ALA 6900.0112
GLN 6910.0064
GLU 6920.0033
SER 6930.0033
LYS 6940.0039
ASN 6950.0030
ILE 6960.0040
TRP 6970.0050
LYS 6980.0046
LEU 6990.0040
GLN 7000.0048
ARG 7010.0048
ALA 7020.0062
ILE 7030.0054
THR 7040.0055
ILE 7050.0072
LEU 7060.0082
ASP 7070.0139
THR 7080.0114
GLU 7090.0119
LYS 7100.0145
SER 7110.0143
PHE 7120.0125
LEU 7130.0181
LYS 7140.0146
CYS 7150.0143
MET 7160.0165
ARG 7170.0171
LYS 7180.0117
ALA 7190.0109
PHE 7200.0092
ARG 7210.0095
SER 7220.0084
GLY 7230.0043
LYS 7240.0195
LEU 7250.0135
LEU 7260.0227
TYR 7380.0065
ARG 7390.0068
TRP 7400.0075
CYS 7410.0126
PHE 7420.0095
ARG 7430.0152
VAL 7440.0161
ASP 7450.0205
GLU 7460.0196

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.