CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200345243697656

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0536
VAL 2830.0180
GLY 2840.0170
ASN 2850.0152
THR 2860.0152
VAL 2870.0151
LEU 2880.0126
HIS 2890.0121
ALA 2900.0141
LEU 2910.0129
VAL 2920.0111
GLU 2930.0129
VAL 2940.0142
ALA 2950.0124
ASP 2960.0128
ASN 2970.0110
THR 2980.0124
VAL 2990.0113
ASP 3000.0128
ASN 3010.0127
THR 3020.0102
LYS 3030.0101
PHE 3040.0122
VAL 3050.0113
THR 3060.0094
SER 3070.0112
MET 3080.0127
TYR 3090.0109
ASN 3100.0107
GLU 3110.0132
ILE 3120.0137
LEU 3130.0121
ILE 3140.0133
LEU 3150.0156
GLY 3160.0152
ALA 3170.0147
LYS 3180.0168
LEU 3190.0183
HIS 3200.0177
PRO 3210.0167
THR 3220.0172
LEU 3230.0158
LYS 3240.0132
LEU 3250.0125
GLU 3260.0102
GLU 3270.0106
ILE 3280.0123
THR 3290.0115
ASN 3300.0125
ARG 3310.0135
LYS 3320.0112
GLY 3330.0101
LEU 3340.0088
THR 3350.0088
PRO 3360.0091
LEU 3370.0066
ALA 3380.0061
LEU 3390.0083
ALA 3400.0077
ALA 3410.0059
SER 3420.0072
SER 3430.0094
GLY 3440.0086
LYS 3450.0087
ILE 3460.0072
GLY 3470.0075
VAL 3480.0074
LEU 3490.0053
ALA 3500.0042
TYR 3510.0050
ILE 3520.0052
LEU 3530.0031
GLN 3540.0026
ARG 3550.0049
GLU 3560.0058
ILE 3570.0082
HIS 3580.0092
GLU 3590.0112
PRO 3600.0137
GLU 3610.0147
CYS 3620.0124
ARG 3630.0111
HIS 3640.0117
LEU 3650.0103
SER 3660.0081
ARG 3670.0060
LYS 3680.0053
PHE 3690.0065
THR 3700.0063
GLU 3710.0085
TRP 3720.0085
ALA 3730.0068
TYR 3740.0077
GLY 3750.0065
PRO 3760.0070
VAL 3770.0069
HIS 3780.0059
SER 3790.0072
SER 3800.0055
LEU 3810.0065
TYR 3820.0051
ASP 3830.0061
LEU 3840.0051
SER 3850.0064
CYS 3860.0052
ILE 3870.0031
ASP 3880.0032
THR 3890.0051
CYS 3900.0056
GLU 3910.0059
LYS 3920.0061
ASN 3930.0045
SER 3940.0032
VAL 3950.0027
LEU 3960.0016
GLU 3970.0021
VAL 3980.0043
ILE 3990.0046
ALA 4000.0046
TYR 4010.0050
SER 4020.0068
SER 4030.0088
SER 4040.0098
GLU 4050.0116
THR 4060.0100
PRO 4070.0112
ASN 4080.0093
ARG 4090.0077
HIS 4100.0088
ASP 4110.0080
MET 4120.0060
LEU 4130.0049
LEU 4140.0056
VAL 4150.0035
GLU 4160.0030
PRO 4170.0023
LEU 4180.0024
ASN 4190.0046
ARG 4200.0052
LEU 4210.0046
LEU 4220.0053
GLN 4230.0074
ASP 4240.0078
LYS 4250.0073
TRP 4260.0084
ASP 4270.0104
ARG 4280.0105
PHE 4290.0101
VAL 4300.0089
LYS 4310.0107
ARG 4320.0123
ILE 4330.0108
PHE 4340.0104
TYR 4350.0127
PHE 4360.0129
ASN 4370.0112
PHE 4380.0127
PHE 4390.0146
VAL 4400.0137
TYR 4410.0131
CYS 4420.0155
LEU 4430.0162
TYR 4440.0147
MET 4450.0159
ILE 4460.0181
ILE 4470.0176
PHE 4480.0167
THR 4490.0188
ALA 4500.0203
ALA 4510.0192
ALA 4520.0193
TYR 4530.0218
TYR 4540.0225
ARG 4550.0211
PRO 4560.0222
VAL 4570.0236
GLU 4580.0231
GLY 4590.0222
LEU 4600.0199
PRO 4610.0182
PRO 4620.0171
TYR 4630.0191
LYS 4640.0197
LEU 4650.0203
LYS 4660.0228
ASN 4670.0237
THR 4680.0251
VAL 4690.0242
GLY 4700.0240
ASP 4710.0222
TYR 4720.0210
PHE 4730.0208
ARG 4740.0202
VAL 4750.0182
THR 4760.0175
GLY 4770.0174
GLU 4780.0162
ILE 4790.0144
LEU 4800.0142
SER 4810.0141
VAL 4820.0123
SER 4830.0110
GLY 4840.0111
GLY 4850.0105
VAL 4860.0084
TYR 4870.0078
PHE 4880.0081
PHE 4890.0072
PHE 4900.0051
ARG 4910.0052
GLY 4920.0060
ILE 4930.0046
GLN 4940.0028
TYR 4950.0041
PHE 4960.0055
LEU 4970.0042
GLN 4980.0033
ARG 4990.0051
ARG 5000.0068
PRO 5010.0083
SER 5020.0105
LEU 5030.0121
LYS 5040.0134
SER 5050.0116
LEU 5060.0106
PHE 5070.0117
VAL 5080.0115
ASP 5090.0096
SER 5100.0086
TYR 5110.0105
SER 5120.0100
GLU 5130.0084
ILE 5140.0098
LEU 5150.0114
PHE 5160.0102
PHE 5170.0092
VAL 5180.0114
GLN 5190.0123
SER 5200.0106
LEU 5210.0108
PHE 5220.0132
MET 5230.0128
LEU 5240.0110
VAL 5250.0126
SER 5260.0143
VAL 5270.0129
VAL 5280.0122
LEU 5290.0146
TYR 5300.0153
PHE 5310.0139
SER 5320.0141
GLN 5330.0165
ARG 5340.0176
LYS 5350.0195
GLU 5360.0187
TYR 5370.0170
VAL 5380.0189
ALA 5390.0190
SER 5400.0166
MET 5410.0165
VAL 5420.0183
PHE 5430.0171
SER 5440.0151
LEU 5450.0167
ALA 5460.0177
MET 5470.0154
GLY 5480.0147
TRP 5490.0164
THR 5500.0159
ASN 5510.0135
MET 5520.0141
LEU 5530.0139
TYR 5540.0117
TYR 5550.0118
THR 5560.0132
ARG 5570.0115
GLY 5580.0105
PHE 5590.0126
GLN 5600.0128
GLN 5610.0149
MET 5620.0152
GLY 5630.0135
ILE 5640.0146
TYR 5650.0157
ALA 5660.0139
VAL 5670.0131
MET 5680.0148
ILE 5690.0147
GLU 5700.0132
LYS 5710.0142
MET 5720.0144
ILE 5730.0139
LEU 5740.0136
ARG 5750.0143
ASP 5760.0139
LEU 5770.0117
CYS 5780.0112
ARG 5790.0108
PHE 5800.0084
MET 5810.0053
PHE 5820.0066
VAL 5830.0078
TYR 5840.0043
LEU 5850.0063
VAL 5860.0111
PHE 5870.0121
LEU 5880.0129
PHE 5890.0159
GLY 5900.0199
PHE 5910.0220
SER 5920.0233
THR 5930.0271
ALA 5940.0304
VAL 5950.0321
VAL 5960.0342
THR 5970.0378
LEU 5980.0408
ILE 5990.0432
GLU 6000.0486
ASP 6010.0536
SER 6260.0464
TYR 6270.0401
ASN 6280.0410
SER 6290.0355
LEU 6300.0290
TYR 6310.0271
SER 6320.0316
THR 6330.0290
CYS 6340.0225
LEU 6350.0250
GLU 6360.0277
LEU 6370.0217
PHE 6380.0185
LYS 6390.0232
PHE 6400.0196
THR 6410.0151
ILE 6420.0212
GLY 6430.0229
MET 6440.0283
GLY 6450.0265
ASP 6460.0323
LEU 6470.0305
GLU 6480.0373
PHE 6490.0386
THR 6500.0432
GLU 6510.0489
ASN 6520.0507
TYR 6530.0483
ASP 6540.0504
PHE 6550.0479
LYS 6560.0445
ALA 6570.0416
VAL 6580.0392
PHE 6590.0364
ILE 6600.0333
ILE 6610.0309
LEU 6620.0282
LEU 6630.0251
LEU 6640.0225
ALA 6650.0204
TYR 6660.0171
VAL 6670.0148
ILE 6680.0119
LEU 6690.0107
THR 6700.0068
TYR 6710.0085
ILE 6720.0050
LEU 6730.0053
LEU 6740.0046
LEU 6750.0061
ASN 6760.0078
MET 6770.0094
LEU 6780.0106
ILE 6790.0127
ALA 6800.0138
LEU 6810.0148
MET 6820.0156
GLY 6830.0171
GLU 6840.0179
THR 6850.0167
VAL 6860.0167
ASN 6870.0187
LYS 6880.0178
ILE 6890.0158
ALA 6900.0159
GLN 6910.0147
GLU 6920.0131
SER 6930.0132
LYS 6940.0130
ASN 6950.0105
ILE 6960.0103
TRP 6970.0106
LYS 6980.0084
LEU 6990.0073
GLN 7000.0081
ARG 7010.0077
ALA 7020.0053
ILE 7030.0053
THR 7040.0065
ILE 7050.0055
LEU 7060.0034
ASP 7070.0043
THR 7080.0061
GLU 7090.0052
LYS 7100.0039
SER 7110.0055
PHE 7120.0076
LEU 7130.0085
LYS 7140.0103
CYS 7150.0098
MET 7160.0104
ARG 7170.0092
LYS 7180.0106
ALA 7190.0090
PHE 7200.0083
ARG 7210.0079
SER 7220.0091
GLY 7230.0099
LYS 7240.0123
LEU 7250.0129
LEU 7260.0129
TYR 7380.0117
ARG 7390.0096
TRP 7400.0087
CYS 7410.0083
PHE 7420.0070
ARG 7430.0074
VAL 7440.0062
ASP 7450.0075
GLU 7460.0063

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.