CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200345243697656

---  normal mode 78  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0701
VAL 2830.0132
GLY 2840.0080
ASN 2850.0121
THR 2860.0090
VAL 2870.0076
LEU 2880.0070
HIS 2890.0086
ALA 2900.0063
LEU 2910.0042
VAL 2920.0059
GLU 2930.0067
VAL 2940.0073
ALA 2950.0081
ASP 2960.0094
ASN 2970.0062
THR 2980.0133
VAL 2990.0148
ASP 3000.0131
ASN 3010.0106
THR 3020.0123
LYS 3030.0121
PHE 3040.0103
VAL 3050.0103
THR 3060.0091
SER 3070.0079
MET 3080.0070
TYR 3090.0071
ASN 3100.0080
GLU 3110.0087
ILE 3120.0070
LEU 3130.0105
ILE 3140.0135
LEU 3150.0172
GLY 3160.0189
ALA 3170.0201
LYS 3180.0134
LEU 3190.0095
HIS 3200.0192
PRO 3210.0152
THR 3220.0373
LEU 3230.0267
LYS 3240.0226
LEU 3250.0098
GLU 3260.0113
GLU 3270.0143
ILE 3280.0123
THR 3290.0120
ASN 3300.0114
ARG 3310.0097
LYS 3320.0158
GLY 3330.0183
LEU 3340.0116
THR 3350.0110
PRO 3360.0103
LEU 3370.0051
ALA 3380.0053
LEU 3390.0060
ALA 3400.0029
ALA 3410.0043
SER 3420.0053
SER 3430.0053
GLY 3440.0060
LYS 3450.0049
ILE 3460.0060
GLY 3470.0073
VAL 3480.0076
LEU 3490.0069
ALA 3500.0091
TYR 3510.0104
ILE 3520.0086
LEU 3530.0075
GLN 3540.0125
ARG 3550.0187
GLU 3560.0202
ILE 3570.0197
HIS 3580.0265
GLU 3590.0233
PRO 3600.0337
GLU 3610.0245
CYS 3620.0219
ARG 3630.0249
HIS 3640.0214
LEU 3650.0206
SER 3660.0195
ARG 3670.0090
LYS 3680.0124
PHE 3690.0173
THR 3700.0120
GLU 3710.0149
TRP 3720.0134
ALA 3730.0119
TYR 3740.0136
GLY 3750.0231
PRO 3760.0224
VAL 3770.0130
HIS 3780.0057
SER 3790.0105
SER 3800.0084
LEU 3810.0056
TYR 3820.0053
ASP 3830.0133
LEU 3840.0215
SER 3850.0213
CYS 3860.0232
ILE 3870.0221
ASP 3880.0240
THR 3890.0214
CYS 3900.0243
GLU 3910.0655
LYS 3920.0433
ASN 3930.0159
SER 3940.0125
VAL 3950.0128
LEU 3960.0127
GLU 3970.0054
VAL 3980.0065
ILE 3990.0060
ALA 4000.0075
TYR 4010.0077
SER 4020.0071
SER 4030.0112
SER 4040.0147
GLU 4050.0283
THR 4060.0062
PRO 4070.0066
ASN 4080.0063
ARG 4090.0075
HIS 4100.0060
ASP 4110.0071
MET 4120.0091
LEU 4130.0119
LEU 4140.0126
VAL 4150.0143
GLU 4160.0127
PRO 4170.0104
LEU 4180.0123
ASN 4190.0134
ARG 4200.0101
LEU 4210.0073
LEU 4220.0096
GLN 4230.0084
ASP 4240.0044
LYS 4250.0026
TRP 4260.0040
ASP 4270.0080
ARG 4280.0078
PHE 4290.0044
VAL 4300.0051
LYS 4310.0098
ARG 4320.0128
ILE 4330.0121
PHE 4340.0126
TYR 4350.0128
PHE 4360.0155
ASN 4370.0167
PHE 4380.0162
PHE 4390.0176
VAL 4400.0187
TYR 4410.0178
CYS 4420.0200
LEU 4430.0191
TYR 4440.0127
MET 4450.0151
ILE 4460.0196
ILE 4470.0146
PHE 4480.0114
THR 4490.0131
ALA 4500.0147
ALA 4510.0079
ALA 4520.0148
TYR 4530.0157
TYR 4540.0091
ARG 4550.0034
PRO 4560.0036
VAL 4570.0160
GLU 4580.0107
GLY 4590.0156
LEU 4600.0163
PRO 4610.0156
PRO 4620.0163
TYR 4630.0122
LYS 4640.0145
LEU 4650.0086
LYS 4660.0062
ASN 4670.0058
THR 4680.0108
VAL 4690.0071
GLY 4700.0065
ASP 4710.0052
TYR 4720.0035
PHE 4730.0069
ARG 4740.0083
VAL 4750.0107
THR 4760.0109
GLY 4770.0116
GLU 4780.0108
ILE 4790.0108
LEU 4800.0110
SER 4810.0086
VAL 4820.0120
SER 4830.0119
GLY 4840.0084
GLY 4850.0075
VAL 4860.0107
TYR 4870.0141
PHE 4880.0061
PHE 4890.0050
PHE 4900.0073
ARG 4910.0113
GLY 4920.0084
ILE 4930.0077
GLN 4940.0124
TYR 4950.0101
PHE 4960.0083
LEU 4970.0154
GLN 4980.0152
ARG 4990.0083
ARG 5000.0112
PRO 5010.0020
SER 5020.0155
LEU 5030.0124
LYS 5040.0133
SER 5050.0092
LEU 5060.0094
PHE 5070.0100
VAL 5080.0097
ASP 5090.0087
SER 5100.0083
TYR 5110.0069
SER 5120.0069
GLU 5130.0074
ILE 5140.0083
LEU 5150.0073
PHE 5160.0099
PHE 5170.0055
VAL 5180.0051
GLN 5190.0049
SER 5200.0036
LEU 5210.0037
PHE 5220.0019
MET 5230.0043
LEU 5240.0044
VAL 5250.0050
SER 5260.0050
VAL 5270.0053
VAL 5280.0035
LEU 5290.0053
TYR 5300.0099
PHE 5310.0104
SER 5320.0089
GLN 5330.0125
ARG 5340.0077
LYS 5350.0072
GLU 5360.0054
TYR 5370.0059
VAL 5380.0077
ALA 5390.0076
SER 5400.0046
MET 5410.0038
VAL 5420.0048
PHE 5430.0023
SER 5440.0036
LEU 5450.0095
ALA 5460.0119
MET 5470.0107
GLY 5480.0127
TRP 5490.0186
THR 5500.0172
ASN 5510.0161
MET 5520.0187
LEU 5530.0117
TYR 5540.0126
TYR 5550.0151
THR 5560.0093
ARG 5570.0092
GLY 5580.0116
PHE 5590.0120
GLN 5600.0117
GLN 5610.0116
MET 5620.0097
GLY 5630.0062
ILE 5640.0029
TYR 5650.0077
ALA 5660.0043
VAL 5670.0045
MET 5680.0118
ILE 5690.0101
GLU 5700.0076
LYS 5710.0118
MET 5720.0120
ILE 5730.0120
LEU 5740.0094
ARG 5750.0086
ASP 5760.0110
LEU 5770.0150
CYS 5780.0152
ARG 5790.0120
PHE 5800.0114
MET 5810.0071
PHE 5820.0125
VAL 5830.0096
TYR 5840.0049
LEU 5850.0085
VAL 5860.0078
PHE 5870.0073
LEU 5880.0071
PHE 5890.0056
GLY 5900.0045
PHE 5910.0034
SER 5920.0032
THR 5930.0003
ALA 5940.0015
VAL 5950.0034
VAL 5960.0055
THR 5970.0054
LEU 5980.0079
ILE 5990.0043
GLU 6000.0063
ASP 6010.0044
SER 6260.0119
TYR 6270.0100
ASN 6280.0094
SER 6290.0095
LEU 6300.0054
TYR 6310.0054
SER 6320.0060
THR 6330.0034
CYS 6340.0019
LEU 6350.0030
GLU 6360.0027
LEU 6370.0037
PHE 6380.0066
LYS 6390.0059
PHE 6400.0042
THR 6410.0076
ILE 6420.0098
GLY 6430.0071
MET 6440.0104
GLY 6450.0035
ASP 6460.0064
LEU 6470.0060
GLU 6480.0057
PHE 6490.0048
THR 6500.0101
GLU 6510.0109
ASN 6520.0061
TYR 6530.0070
ASP 6540.0115
PHE 6550.0077
LYS 6560.0103
ALA 6570.0155
VAL 6580.0142
PHE 6590.0097
ILE 6600.0121
ILE 6610.0153
LEU 6620.0076
LEU 6630.0046
LEU 6640.0047
ALA 6650.0084
TYR 6660.0074
VAL 6670.0071
ILE 6680.0104
LEU 6690.0085
THR 6700.0073
TYR 6710.0094
ILE 6720.0094
LEU 6730.0057
LEU 6740.0054
LEU 6750.0104
ASN 6760.0119
MET 6770.0139
LEU 6780.0128
ILE 6790.0115
ALA 6800.0113
LEU 6810.0122
MET 6820.0071
GLY 6830.0151
GLU 6840.0153
THR 6850.0227
VAL 6860.0197
ASN 6870.0157
LYS 6880.0239
ILE 6890.0182
ALA 6900.0116
GLN 6910.0092
GLU 6920.0101
SER 6930.0072
LYS 6940.0028
ASN 6950.0056
ILE 6960.0038
TRP 6970.0064
LYS 6980.0079
LEU 6990.0083
GLN 7000.0082
ARG 7010.0064
ALA 7020.0055
ILE 7030.0062
THR 7040.0057
ILE 7050.0054
LEU 7060.0089
ASP 7070.0151
THR 7080.0121
GLU 7090.0123
LYS 7100.0158
SER 7110.0194
PHE 7120.0271
LEU 7130.0429
LYS 7140.0414
CYS 7150.0701
MET 7160.0569
ARG 7170.0572
LYS 7180.0422
ALA 7190.0410
PHE 7200.0349
ARG 7210.0300
SER 7220.0392
GLY 7230.0421
LYS 7240.0432
LEU 7250.0368
LEU 7260.0698
TYR 7380.0429
ARG 7390.0416
TRP 7400.0400
CYS 7410.0270
PHE 7420.0175
ARG 7430.0065
VAL 7440.0045
ASP 7450.0076
GLU 7460.0059

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.