CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200345243697656

---  normal mode 81  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0568
VAL 2830.0031
GLY 2840.0020
ASN 2850.0020
THR 2860.0021
VAL 2870.0015
LEU 2880.0017
HIS 2890.0013
ALA 2900.0010
LEU 2910.0017
VAL 2920.0024
GLU 2930.0025
VAL 2940.0023
ALA 2950.0043
ASP 2960.0054
ASN 2970.0037
THR 2980.0058
VAL 2990.0039
ASP 3000.0058
ASN 3010.0051
THR 3020.0037
LYS 3030.0025
PHE 3040.0028
VAL 3050.0035
THR 3060.0028
SER 3070.0023
MET 3080.0022
TYR 3090.0022
ASN 3100.0024
GLU 3110.0017
ILE 3120.0017
LEU 3130.0022
ILE 3140.0033
LEU 3150.0031
GLY 3160.0030
ALA 3170.0027
LYS 3180.0044
LEU 3190.0039
HIS 3200.0038
PRO 3210.0052
THR 3220.0085
LEU 3230.0062
LYS 3240.0049
LEU 3250.0026
GLU 3260.0021
GLU 3270.0026
ILE 3280.0028
THR 3290.0022
ASN 3300.0015
ARG 3310.0017
LYS 3320.0011
GLY 3330.0030
LEU 3340.0014
THR 3350.0014
PRO 3360.0008
LEU 3370.0003
ALA 3380.0008
LEU 3390.0010
ALA 3400.0014
ALA 3410.0010
SER 3420.0017
SER 3430.0015
GLY 3440.0016
LYS 3450.0031
ILE 3460.0037
GLY 3470.0031
VAL 3480.0030
LEU 3490.0027
ALA 3500.0025
TYR 3510.0024
ILE 3520.0033
LEU 3530.0032
GLN 3540.0039
ARG 3550.0036
GLU 3560.0046
ILE 3570.0056
HIS 3580.0029
GLU 3590.0042
PRO 3600.0026
GLU 3610.0022
CYS 3620.0039
ARG 3630.0043
HIS 3640.0042
LEU 3650.0045
SER 3660.0051
ARG 3670.0037
LYS 3680.0031
PHE 3690.0033
THR 3700.0020
GLU 3710.0041
TRP 3720.0033
ALA 3730.0029
TYR 3740.0040
GLY 3750.0036
PRO 3760.0088
VAL 3770.0048
HIS 3780.0026
SER 3790.0031
SER 3800.0015
LEU 3810.0007
TYR 3820.0023
ASP 3830.0031
LEU 3840.0031
SER 3850.0041
CYS 3860.0033
ILE 3870.0026
ASP 3880.0032
THR 3890.0032
CYS 3900.0039
GLU 3910.0077
LYS 3920.0066
ASN 3930.0024
SER 3940.0017
VAL 3950.0016
LEU 3960.0019
GLU 3970.0020
VAL 3980.0016
ILE 3990.0023
ALA 4000.0076
TYR 4010.0053
SER 4020.0055
SER 4030.0247
SER 4040.0059
GLU 4050.0288
THR 4060.0067
PRO 4070.0073
ASN 4080.0046
ARG 4090.0035
HIS 4100.0038
ASP 4110.0018
MET 4120.0027
LEU 4130.0028
LEU 4140.0036
VAL 4150.0048
GLU 4160.0052
PRO 4170.0043
LEU 4180.0038
ASN 4190.0045
ARG 4200.0047
LEU 4210.0031
LEU 4220.0035
GLN 4230.0040
ASP 4240.0043
LYS 4250.0036
TRP 4260.0031
ASP 4270.0049
ARG 4280.0036
PHE 4290.0039
VAL 4300.0082
LYS 4310.0085
ARG 4320.0142
ILE 4330.0118
PHE 4340.0089
TYR 4350.0096
PHE 4360.0071
ASN 4370.0057
PHE 4380.0032
PHE 4390.0065
VAL 4400.0092
TYR 4410.0069
CYS 4420.0092
LEU 4430.0136
TYR 4440.0124
MET 4450.0106
ILE 4460.0127
ILE 4470.0152
PHE 4480.0166
THR 4490.0155
ALA 4500.0195
ALA 4510.0183
ALA 4520.0293
TYR 4530.0286
TYR 4540.0133
ARG 4550.0118
PRO 4560.0129
VAL 4570.0174
GLU 4580.0105
GLY 4590.0178
LEU 4600.0319
PRO 4610.0201
PRO 4620.0227
TYR 4630.0040
LYS 4640.0036
LEU 4650.0059
LYS 4660.0113
ASN 4670.0111
THR 4680.0071
VAL 4690.0159
GLY 4700.0092
ASP 4710.0110
TYR 4720.0172
PHE 4730.0159
ARG 4740.0138
VAL 4750.0259
THR 4760.0254
GLY 4770.0175
GLU 4780.0210
ILE 4790.0236
LEU 4800.0172
SER 4810.0119
VAL 4820.0116
SER 4830.0102
GLY 4840.0077
GLY 4850.0086
VAL 4860.0102
TYR 4870.0124
PHE 4880.0132
PHE 4890.0101
PHE 4900.0092
ARG 4910.0148
GLY 4920.0085
ILE 4930.0082
GLN 4940.0174
TYR 4950.0102
PHE 4960.0087
LEU 4970.0250
GLN 4980.0256
ARG 4990.0031
ARG 5000.0141
PRO 5010.0201
SER 5020.0426
LEU 5030.0130
LYS 5040.0273
SER 5050.0126
LEU 5060.0138
PHE 5070.0145
VAL 5080.0077
ASP 5090.0096
SER 5100.0101
TYR 5110.0076
SER 5120.0079
GLU 5130.0074
ILE 5140.0079
LEU 5150.0102
PHE 5160.0103
PHE 5170.0119
VAL 5180.0122
GLN 5190.0128
SER 5200.0119
LEU 5210.0134
PHE 5220.0118
MET 5230.0062
LEU 5240.0069
VAL 5250.0097
SER 5260.0121
VAL 5270.0277
VAL 5280.0279
LEU 5290.0153
TYR 5300.0175
PHE 5310.0238
SER 5320.0251
GLN 5330.0150
ARG 5340.0287
LYS 5350.0191
GLU 5360.0137
TYR 5370.0108
VAL 5380.0161
ALA 5390.0140
SER 5400.0130
MET 5410.0123
VAL 5420.0101
PHE 5430.0135
SER 5440.0113
LEU 5450.0057
ALA 5460.0077
MET 5470.0088
GLY 5480.0083
TRP 5490.0064
THR 5500.0056
ASN 5510.0071
MET 5520.0057
LEU 5530.0064
TYR 5540.0047
TYR 5550.0030
THR 5560.0057
ARG 5570.0042
GLY 5580.0022
PHE 5590.0092
GLN 5600.0137
GLN 5610.0161
MET 5620.0124
GLY 5630.0050
ILE 5640.0051
TYR 5650.0139
ALA 5660.0138
VAL 5670.0122
MET 5680.0158
ILE 5690.0181
GLU 5700.0162
LYS 5710.0184
MET 5720.0161
ILE 5730.0121
LEU 5740.0193
ARG 5750.0249
ASP 5760.0228
LEU 5770.0281
CYS 5780.0404
ARG 5790.0395
PHE 5800.0299
MET 5810.0374
PHE 5820.0429
VAL 5830.0360
TYR 5840.0302
LEU 5850.0344
VAL 5860.0323
PHE 5870.0264
LEU 5880.0199
PHE 5890.0175
GLY 5900.0186
PHE 5910.0154
SER 5920.0160
THR 5930.0202
ALA 5940.0235
VAL 5950.0213
VAL 5960.0226
THR 5970.0268
LEU 5980.0099
ILE 5990.0084
GLU 6000.0231
ASP 6010.0238
SER 6260.0195
TYR 6270.0245
ASN 6280.0217
SER 6290.0297
LEU 6300.0196
TYR 6310.0259
SER 6320.0266
THR 6330.0210
CYS 6340.0118
LEU 6350.0181
GLU 6360.0178
LEU 6370.0076
PHE 6380.0127
LYS 6390.0100
PHE 6400.0158
THR 6410.0329
ILE 6420.0487
GLY 6430.0524
MET 6440.0179
GLY 6450.0159
ASP 6460.0281
LEU 6470.0201
GLU 6480.0205
PHE 6490.0208
THR 6500.0204
GLU 6510.0166
ASN 6520.0046
TYR 6530.0195
ASP 6540.0336
PHE 6550.0455
LYS 6560.0492
ALA 6570.0568
VAL 6580.0409
PHE 6590.0249
ILE 6600.0304
ILE 6610.0351
LEU 6620.0184
LEU 6630.0151
LEU 6640.0138
ALA 6650.0134
TYR 6660.0056
VAL 6670.0063
ILE 6680.0164
LEU 6690.0098
THR 6700.0122
TYR 6710.0244
ILE 6720.0186
LEU 6730.0130
LEU 6740.0128
LEU 6750.0110
ASN 6760.0161
MET 6770.0215
LEU 6780.0164
ILE 6790.0274
ALA 6800.0233
LEU 6810.0204
MET 6820.0230
GLY 6830.0245
GLU 6840.0243
THR 6850.0274
VAL 6860.0238
ASN 6870.0135
LYS 6880.0340
ILE 6890.0309
ALA 6900.0144
GLN 6910.0346
GLU 6920.0290
SER 6930.0146
LYS 6940.0167
ASN 6950.0120
ILE 6960.0106
TRP 6970.0068
LYS 6980.0033
LEU 6990.0043
GLN 7000.0032
ARG 7010.0012
ALA 7020.0014
ILE 7030.0018
THR 7040.0048
ILE 7050.0037
LEU 7060.0041
ASP 7070.0082
THR 7080.0064
GLU 7090.0055
LYS 7100.0065
SER 7110.0040
PHE 7120.0022
LEU 7130.0078
LYS 7140.0069
CYS 7150.0151
MET 7160.0129
ARG 7170.0179
LYS 7180.0155
ALA 7190.0122
PHE 7200.0089
ARG 7210.0066
SER 7220.0049
GLY 7230.0044
LYS 7240.0061
LEU 7250.0118
LEU 7260.0053
TYR 7380.0058
ARG 7390.0043
TRP 7400.0034
CYS 7410.0032
PHE 7420.0006
ARG 7430.0016
VAL 7440.0055
ASP 7450.0060
GLU 7460.0072

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.