CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200345243697656

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0469
VAL 2830.0163
GLY 2840.0157
ASN 2850.0155
THR 2860.0153
VAL 2870.0171
LEU 2880.0159
HIS 2890.0138
ALA 2900.0141
LEU 2910.0112
VAL 2920.0104
GLU 2930.0116
VAL 2940.0107
ALA 2950.0115
ASP 2960.0110
ASN 2970.0082
THR 2980.0193
VAL 2990.0173
ASP 3000.0275
ASN 3010.0194
THR 3020.0208
LYS 3030.0257
PHE 3040.0170
VAL 3050.0135
THR 3060.0173
SER 3070.0121
MET 3080.0043
TYR 3090.0093
ASN 3100.0176
GLU 3110.0154
ILE 3120.0243
LEU 3130.0320
ILE 3140.0332
LEU 3150.0313
GLY 3160.0319
ALA 3170.0267
LYS 3180.0301
LEU 3190.0255
HIS 3200.0042
PRO 3210.0040
THR 3220.0251
LEU 3230.0319
LYS 3240.0391
LEU 3250.0236
GLU 3260.0340
GLU 3270.0395
ILE 3280.0282
THR 3290.0222
ASN 3300.0147
ARG 3310.0098
LYS 3320.0097
GLY 3330.0209
LEU 3340.0138
THR 3350.0163
PRO 3360.0169
LEU 3370.0138
ALA 3380.0135
LEU 3390.0126
ALA 3400.0103
ALA 3410.0112
SER 3420.0104
SER 3430.0113
GLY 3440.0094
LYS 3450.0093
ILE 3460.0096
GLY 3470.0113
VAL 3480.0128
LEU 3490.0128
ALA 3500.0139
TYR 3510.0181
ILE 3520.0181
LEU 3530.0168
GLN 3540.0166
ARG 3550.0146
GLU 3560.0102
ILE 3570.0066
HIS 3580.0132
GLU 3590.0154
PRO 3600.0198
GLU 3610.0177
CYS 3620.0211
ARG 3630.0160
HIS 3640.0166
LEU 3650.0165
SER 3660.0101
ARG 3670.0156
LYS 3680.0121
PHE 3690.0096
THR 3700.0327
GLU 3710.0342
TRP 3720.0261
ALA 3730.0171
TYR 3740.0117
GLY 3750.0292
PRO 3760.0398
VAL 3770.0199
HIS 3780.0247
SER 3790.0316
SER 3800.0252
LEU 3810.0226
TYR 3820.0100
ASP 3830.0174
LEU 3840.0242
SER 3850.0242
CYS 3860.0194
ILE 3870.0164
ASP 3880.0150
THR 3890.0181
CYS 3900.0207
GLU 3910.0133
LYS 3920.0088
ASN 3930.0108
SER 3940.0106
VAL 3950.0074
LEU 3960.0071
GLU 3970.0057
VAL 3980.0045
ILE 3990.0034
ALA 4000.0040
TYR 4010.0026
SER 4020.0029
SER 4030.0084
SER 4040.0075
GLU 4050.0077
THR 4060.0083
PRO 4070.0070
ASN 4080.0062
ARG 4090.0055
HIS 4100.0045
ASP 4110.0051
MET 4120.0084
LEU 4130.0067
LEU 4140.0068
VAL 4150.0200
GLU 4160.0144
PRO 4170.0090
LEU 4180.0087
ASN 4190.0104
ARG 4200.0137
LEU 4210.0128
LEU 4220.0119
GLN 4230.0117
ASP 4240.0178
LYS 4250.0142
TRP 4260.0087
ASP 4270.0119
ARG 4280.0119
PHE 4290.0047
VAL 4300.0040
LYS 4310.0039
ARG 4320.0056
ILE 4330.0038
PHE 4340.0051
TYR 4350.0061
PHE 4360.0173
ASN 4370.0103
PHE 4380.0081
PHE 4390.0263
VAL 4400.0255
TYR 4410.0104
CYS 4420.0088
LEU 4430.0096
TYR 4440.0071
MET 4450.0046
ILE 4460.0047
ILE 4470.0070
PHE 4480.0087
THR 4490.0081
ALA 4500.0069
ALA 4510.0051
ALA 4520.0051
TYR 4530.0089
TYR 4540.0050
ARG 4550.0054
PRO 4560.0078
VAL 4570.0108
GLU 4580.0070
GLY 4590.0055
LEU 4600.0061
PRO 4610.0033
PRO 4620.0021
TYR 4630.0032
LYS 4640.0030
LEU 4650.0040
LYS 4660.0065
ASN 4670.0116
THR 4680.0076
VAL 4690.0042
GLY 4700.0055
ASP 4710.0047
TYR 4720.0058
PHE 4730.0078
ARG 4740.0068
VAL 4750.0050
THR 4760.0039
GLY 4770.0022
GLU 4780.0035
ILE 4790.0086
LEU 4800.0099
SER 4810.0072
VAL 4820.0056
SER 4830.0125
GLY 4840.0109
GLY 4850.0056
VAL 4860.0101
TYR 4870.0096
PHE 4880.0045
PHE 4890.0065
PHE 4900.0059
ARG 4910.0028
GLY 4920.0054
ILE 4930.0050
GLN 4940.0051
TYR 4950.0060
PHE 4960.0075
LEU 4970.0115
GLN 4980.0110
ARG 4990.0102
ARG 5000.0112
PRO 5010.0118
SER 5020.0028
LEU 5030.0244
LYS 5040.0162
SER 5050.0178
LEU 5060.0183
PHE 5070.0188
VAL 5080.0160
ASP 5090.0137
SER 5100.0124
TYR 5110.0077
SER 5120.0051
GLU 5130.0053
ILE 5140.0061
LEU 5150.0052
PHE 5160.0049
PHE 5170.0041
VAL 5180.0039
GLN 5190.0014
SER 5200.0047
LEU 5210.0076
PHE 5220.0039
MET 5230.0015
LEU 5240.0058
VAL 5250.0056
SER 5260.0012
VAL 5270.0015
VAL 5280.0020
LEU 5290.0015
TYR 5300.0006
PHE 5310.0022
SER 5320.0055
GLN 5330.0049
ARG 5340.0068
LYS 5350.0046
GLU 5360.0031
TYR 5370.0017
VAL 5380.0073
ALA 5390.0093
SER 5400.0077
MET 5410.0088
VAL 5420.0157
PHE 5430.0136
SER 5440.0076
LEU 5450.0098
ALA 5460.0101
MET 5470.0056
GLY 5480.0054
TRP 5490.0050
THR 5500.0102
ASN 5510.0095
MET 5520.0080
LEU 5530.0182
TYR 5540.0147
TYR 5550.0107
THR 5560.0127
ARG 5570.0099
GLY 5580.0083
PHE 5590.0110
GLN 5600.0106
GLN 5610.0107
MET 5620.0128
GLY 5630.0102
ILE 5640.0103
TYR 5650.0109
ALA 5660.0087
VAL 5670.0088
MET 5680.0097
ILE 5690.0095
GLU 5700.0089
LYS 5710.0062
MET 5720.0090
ILE 5730.0105
LEU 5740.0071
ARG 5750.0090
ASP 5760.0088
LEU 5770.0194
CYS 5780.0186
ARG 5790.0146
PHE 5800.0122
MET 5810.0118
PHE 5820.0088
VAL 5830.0106
TYR 5840.0124
LEU 5850.0134
VAL 5860.0113
PHE 5870.0111
LEU 5880.0106
PHE 5890.0100
GLY 5900.0109
PHE 5910.0095
SER 5920.0061
THR 5930.0100
ALA 5940.0108
VAL 5950.0053
VAL 5960.0065
THR 5970.0084
LEU 5980.0124
ILE 5990.0119
GLU 6000.0144
ASP 6010.0392
SER 6260.0144
TYR 6270.0130
ASN 6280.0182
SER 6290.0202
LEU 6300.0235
TYR 6310.0256
SER 6320.0124
THR 6330.0045
CYS 6340.0056
LEU 6350.0115
GLU 6360.0092
LEU 6370.0058
PHE 6380.0107
LYS 6390.0088
PHE 6400.0043
THR 6410.0143
ILE 6420.0237
GLY 6430.0216
MET 6440.0092
GLY 6450.0021
ASP 6460.0130
LEU 6470.0096
GLU 6480.0078
PHE 6490.0085
THR 6500.0092
GLU 6510.0090
ASN 6520.0156
TYR 6530.0126
ASP 6540.0102
PHE 6550.0172
LYS 6560.0170
ALA 6570.0162
VAL 6580.0145
PHE 6590.0082
ILE 6600.0093
ILE 6610.0093
LEU 6620.0073
LEU 6630.0076
LEU 6640.0091
ALA 6650.0063
TYR 6660.0076
VAL 6670.0084
ILE 6680.0067
LEU 6690.0062
THR 6700.0102
TYR 6710.0135
ILE 6720.0146
LEU 6730.0117
LEU 6740.0099
LEU 6750.0097
ASN 6760.0113
MET 6770.0103
LEU 6780.0083
ILE 6790.0063
ALA 6800.0076
LEU 6810.0091
MET 6820.0083
GLY 6830.0076
GLU 6840.0131
THR 6850.0093
VAL 6860.0134
ASN 6870.0193
LYS 6880.0200
ILE 6890.0137
ALA 6900.0130
GLN 6910.0132
GLU 6920.0117
SER 6930.0099
LYS 6940.0123
ASN 6950.0079
ILE 6960.0066
TRP 6970.0069
LYS 6980.0048
LEU 6990.0042
GLN 7000.0058
ARG 7010.0017
ALA 7020.0040
ILE 7030.0053
THR 7040.0050
ILE 7050.0082
LEU 7060.0149
ASP 7070.0211
THR 7080.0146
GLU 7090.0220
LYS 7100.0447
SER 7110.0447
PHE 7120.0453
LEU 7130.0469
LYS 7140.0366
CYS 7150.0296
MET 7160.0193
ARG 7170.0291
LYS 7180.0380
ALA 7190.0076
PHE 7200.0123
ARG 7210.0197
SER 7220.0413
GLY 7230.0316
LYS 7240.0295
LEU 7250.0463
LEU 7260.0252
TYR 7380.0179
ARG 7390.0156
TRP 7400.0236
CYS 7410.0279
PHE 7420.0164
ARG 7430.0177
VAL 7440.0305
ASP 7450.0366
GLU 7460.0362

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.