CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200345243697656

---  normal mode 98  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0572
VAL 2830.0063
GLY 2840.0042
ASN 2850.0028
THR 2860.0027
VAL 2870.0039
LEU 2880.0026
HIS 2890.0031
ALA 2900.0040
LEU 2910.0033
VAL 2920.0046
GLU 2930.0072
VAL 2940.0069
ALA 2950.0090
ASP 2960.0069
ASN 2970.0055
THR 2980.0069
VAL 2990.0068
ASP 3000.0156
ASN 3010.0121
THR 3020.0104
LYS 3030.0111
PHE 3040.0080
VAL 3050.0089
THR 3060.0073
SER 3070.0045
MET 3080.0040
TYR 3090.0041
ASN 3100.0043
GLU 3110.0044
ILE 3120.0057
LEU 3130.0056
ILE 3140.0067
LEU 3150.0058
GLY 3160.0072
ALA 3170.0053
LYS 3180.0030
LEU 3190.0040
HIS 3200.0012
PRO 3210.0034
THR 3220.0059
LEU 3230.0060
LYS 3240.0072
LEU 3250.0061
GLU 3260.0071
GLU 3270.0077
ILE 3280.0059
THR 3290.0051
ASN 3300.0037
ARG 3310.0040
LYS 3320.0067
GLY 3330.0063
LEU 3340.0035
THR 3350.0036
PRO 3360.0039
LEU 3370.0023
ALA 3380.0027
LEU 3390.0026
ALA 3400.0027
ALA 3410.0026
SER 3420.0025
SER 3430.0051
GLY 3440.0047
LYS 3450.0048
ILE 3460.0033
GLY 3470.0033
VAL 3480.0049
LEU 3490.0029
ALA 3500.0027
TYR 3510.0028
ILE 3520.0028
LEU 3530.0028
GLN 3540.0032
ARG 3550.0045
GLU 3560.0043
ILE 3570.0046
HIS 3580.0057
GLU 3590.0055
PRO 3600.0087
GLU 3610.0078
CYS 3620.0061
ARG 3630.0072
HIS 3640.0078
LEU 3650.0074
SER 3660.0059
ARG 3670.0029
LYS 3680.0031
PHE 3690.0034
THR 3700.0026
GLU 3710.0026
TRP 3720.0027
ALA 3730.0023
TYR 3740.0031
GLY 3750.0047
PRO 3760.0044
VAL 3770.0039
HIS 3780.0031
SER 3790.0009
SER 3800.0012
LEU 3810.0011
TYR 3820.0026
ASP 3830.0026
LEU 3840.0043
SER 3850.0057
CYS 3860.0062
ILE 3870.0062
ASP 3880.0102
THR 3890.0110
CYS 3900.0102
GLU 3910.0146
LYS 3920.0090
ASN 3930.0036
SER 3940.0040
VAL 3950.0038
LEU 3960.0041
GLU 3970.0034
VAL 3980.0028
ILE 3990.0033
ALA 4000.0055
TYR 4010.0058
SER 4020.0080
SER 4030.0107
SER 4040.0104
GLU 4050.0094
THR 4060.0036
PRO 4070.0039
ASN 4080.0041
ARG 4090.0030
HIS 4100.0031
ASP 4110.0035
MET 4120.0021
LEU 4130.0035
LEU 4140.0043
VAL 4150.0029
GLU 4160.0018
PRO 4170.0016
LEU 4180.0025
ASN 4190.0026
ARG 4200.0030
LEU 4210.0055
LEU 4220.0043
GLN 4230.0064
ASP 4240.0060
LYS 4250.0043
TRP 4260.0041
ASP 4270.0065
ARG 4280.0056
PHE 4290.0030
VAL 4300.0036
LYS 4310.0041
ARG 4320.0036
ILE 4330.0033
PHE 4340.0032
TYR 4350.0024
PHE 4360.0021
ASN 4370.0017
PHE 4380.0013
PHE 4390.0045
VAL 4400.0050
TYR 4410.0058
CYS 4420.0044
LEU 4430.0062
TYR 4440.0078
MET 4450.0078
ILE 4460.0090
ILE 4470.0143
PHE 4480.0218
THR 4490.0187
ALA 4500.0249
ALA 4510.0332
ALA 4520.0244
TYR 4530.0350
TYR 4540.0305
ARG 4550.0214
PRO 4560.0178
VAL 4570.0572
GLU 4580.0181
GLY 4590.0277
LEU 4600.0240
PRO 4610.0151
PRO 4620.0128
TYR 4630.0309
LYS 4640.0449
LEU 4650.0276
LYS 4660.0390
ASN 4670.0463
THR 4680.0477
VAL 4690.0121
GLY 4700.0281
ASP 4710.0237
TYR 4720.0108
PHE 4730.0326
ARG 4740.0308
VAL 4750.0161
THR 4760.0166
GLY 4770.0175
GLU 4780.0140
ILE 4790.0135
LEU 4800.0136
SER 4810.0077
VAL 4820.0189
SER 4830.0237
GLY 4840.0233
GLY 4850.0193
VAL 4860.0243
TYR 4870.0263
PHE 4880.0131
PHE 4890.0157
PHE 4900.0164
ARG 4910.0072
GLY 4920.0160
ILE 4930.0197
GLN 4940.0188
TYR 4950.0195
PHE 4960.0131
LEU 4970.0109
GLN 4980.0141
ARG 4990.0141
ARG 5000.0211
PRO 5010.0086
SER 5020.0131
LEU 5030.0132
LYS 5040.0092
SER 5050.0154
LEU 5060.0087
PHE 5070.0108
VAL 5080.0111
ASP 5090.0071
SER 5100.0046
TYR 5110.0054
SER 5120.0092
GLU 5130.0126
ILE 5140.0099
LEU 5150.0105
PHE 5160.0092
PHE 5170.0057
VAL 5180.0057
GLN 5190.0045
SER 5200.0108
LEU 5210.0116
PHE 5220.0070
MET 5230.0131
LEU 5240.0143
VAL 5250.0132
SER 5260.0128
VAL 5270.0100
VAL 5280.0139
LEU 5290.0116
TYR 5300.0051
PHE 5310.0146
SER 5320.0233
GLN 5330.0088
ARG 5340.0130
LYS 5350.0057
GLU 5360.0120
TYR 5370.0094
VAL 5380.0132
ALA 5390.0129
SER 5400.0117
MET 5410.0160
VAL 5420.0172
PHE 5430.0161
SER 5440.0122
LEU 5450.0106
ALA 5460.0104
MET 5470.0090
GLY 5480.0090
TRP 5490.0056
THR 5500.0084
ASN 5510.0077
MET 5520.0040
LEU 5530.0014
TYR 5540.0033
TYR 5550.0031
THR 5560.0058
ARG 5570.0055
GLY 5580.0062
PHE 5590.0088
GLN 5600.0087
GLN 5610.0121
MET 5620.0116
GLY 5630.0080
ILE 5640.0105
TYR 5650.0153
ALA 5660.0069
VAL 5670.0062
MET 5680.0067
ILE 5690.0039
GLU 5700.0041
LYS 5710.0049
MET 5720.0039
ILE 5730.0033
LEU 5740.0063
ARG 5750.0048
ASP 5760.0029
LEU 5770.0036
CYS 5780.0124
ARG 5790.0164
PHE 5800.0051
MET 5810.0042
PHE 5820.0034
VAL 5830.0037
TYR 5840.0057
LEU 5850.0057
VAL 5860.0054
PHE 5870.0070
LEU 5880.0102
PHE 5890.0181
GLY 5900.0172
PHE 5910.0142
SER 5920.0138
THR 5930.0180
ALA 5940.0145
VAL 5950.0101
VAL 5960.0143
THR 5970.0090
LEU 5980.0299
ILE 5990.0262
GLU 6000.0256
ASP 6010.0442
SER 6260.0250
TYR 6270.0108
ASN 6280.0131
SER 6290.0560
LEU 6300.0205
TYR 6310.0353
SER 6320.0296
THR 6330.0210
CYS 6340.0167
LEU 6350.0281
GLU 6360.0228
LEU 6370.0150
PHE 6380.0267
LYS 6390.0265
PHE 6400.0177
THR 6410.0175
ILE 6420.0290
GLY 6430.0300
MET 6440.0332
GLY 6450.0243
ASP 6460.0288
LEU 6470.0112
GLU 6480.0135
PHE 6490.0105
THR 6500.0213
GLU 6510.0243
ASN 6520.0248
TYR 6530.0325
ASP 6540.0481
PHE 6550.0557
LYS 6560.0282
ALA 6570.0282
VAL 6580.0343
PHE 6590.0243
ILE 6600.0241
ILE 6610.0304
LEU 6620.0176
LEU 6630.0159
LEU 6640.0188
ALA 6650.0160
TYR 6660.0100
VAL 6670.0116
ILE 6680.0165
LEU 6690.0138
THR 6700.0089
TYR 6710.0092
ILE 6720.0088
LEU 6730.0096
LEU 6740.0052
LEU 6750.0038
ASN 6760.0053
MET 6770.0248
LEU 6780.0220
ILE 6790.0038
ALA 6800.0197
LEU 6810.0250
MET 6820.0154
GLY 6830.0201
GLU 6840.0143
THR 6850.0138
VAL 6860.0157
ASN 6870.0133
LYS 6880.0179
ILE 6890.0130
ALA 6900.0123
GLN 6910.0092
GLU 6920.0027
SER 6930.0051
LYS 6940.0040
ASN 6950.0058
ILE 6960.0064
TRP 6970.0079
LYS 6980.0076
LEU 6990.0071
GLN 7000.0079
ARG 7010.0071
ALA 7020.0070
ILE 7030.0070
THR 7040.0044
ILE 7050.0038
LEU 7060.0032
ASP 7070.0052
THR 7080.0036
GLU 7090.0025
LYS 7100.0069
SER 7110.0044
PHE 7120.0019
LEU 7130.0045
LYS 7140.0015
CYS 7150.0064
MET 7160.0052
ARG 7170.0100
LYS 7180.0110
ALA 7190.0033
PHE 7200.0022
ARG 7210.0045
SER 7220.0089
GLY 7230.0100
LYS 7240.0080
LEU 7250.0072
LEU 7260.0092
TYR 7380.0061
ARG 7390.0057
TRP 7400.0066
CYS 7410.0038
PHE 7420.0029
ARG 7430.0029
VAL 7440.0014
ASP 7450.0016
GLU 7460.0023

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.