CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200446423711017

---  normal mode 27  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1255
VAL 2830.0394
GLY 2840.0307
ASN 2850.0195
THR 2860.0105
VAL 2870.0085
LEU 2880.0026
HIS 2890.0046
ALA 2900.0052
LEU 2910.0024
VAL 2920.0040
GLU 2930.0061
VAL 2940.0037
ALA 2950.0037
ASP 2960.0045
ASN 2970.0124
THR 2980.0240
VAL 2990.0378
ASP 3000.0384
ASN 3010.0193
THR 3020.0176
LYS 3030.0246
PHE 3040.0192
VAL 3050.0111
THR 3060.0122
SER 3070.0140
MET 3080.0109
TYR 3090.0077
ASN 3100.0092
GLU 3110.0089
ILE 3120.0079
LEU 3130.0099
ILE 3140.0099
LEU 3150.0134
GLY 3160.0159
ALA 3170.0121
LYS 3180.0137
LEU 3190.0215
HIS 3200.0232
PRO 3210.0194
THR 3220.0285
LEU 3230.0237
LYS 3240.0179
LEU 3250.0098
GLU 3260.0089
GLU 3270.0100
ILE 3280.0020
THR 3290.0080
ASN 3300.0129
ARG 3310.0228
LYS 3320.0257
GLY 3330.0173
LEU 3340.0140
THR 3350.0103
PRO 3360.0081
LEU 3370.0099
ALA 3380.0121
LEU 3390.0105
ALA 3400.0101
ALA 3410.0116
SER 3420.0121
SER 3430.0115
GLY 3440.0123
LYS 3450.0100
ILE 3460.0129
GLY 3470.0118
VAL 3480.0109
LEU 3490.0120
ALA 3500.0136
TYR 3510.0123
ILE 3520.0111
LEU 3530.0111
GLN 3540.0115
ARG 3550.0133
GLU 3560.0126
ILE 3570.0121
HIS 3580.0180
GLU 3590.0223
PRO 3600.0227
GLU 3610.0124
CYS 3620.0108
ARG 3630.0111
HIS 3640.0099
LEU 3650.0085
SER 3660.0101
ARG 3670.0094
LYS 3680.0095
PHE 3690.0096
THR 3700.0110
GLU 3710.0172
TRP 3720.0194
ALA 3730.0328
TYR 3740.0381
GLY 3750.0467
PRO 3760.0442
VAL 3770.0280
HIS 3780.0151
SER 3790.0027
SER 3800.0034
LEU 3810.0101
TYR 3820.0084
ASP 3830.0072
LEU 3840.0069
SER 3850.0049
CYS 3860.0048
ILE 3870.0072
ASP 3880.0070
THR 3890.0054
CYS 3900.0053
GLU 3910.0082
LYS 3920.0089
ASN 3930.0097
SER 3940.0080
VAL 3950.0089
LEU 3960.0088
GLU 3970.0093
VAL 3980.0094
ILE 3990.0098
ALA 4000.0083
TYR 4010.0084
SER 4020.0086
SER 4030.0053
SER 4040.0070
GLU 4050.0089
THR 4060.0093
PRO 4070.0099
ASN 4080.0100
ARG 4090.0097
HIS 4100.0108
ASP 4110.0104
MET 4120.0114
LEU 4130.0102
LEU 4140.0115
VAL 4150.0097
GLU 4160.0090
PRO 4170.0081
LEU 4180.0079
ASN 4190.0083
ARG 4200.0084
LEU 4210.0079
LEU 4220.0078
GLN 4230.0091
ASP 4240.0080
LYS 4250.0059
TRP 4260.0067
ASP 4270.0078
ARG 4280.0062
PHE 4290.0045
VAL 4300.0047
LYS 4310.0051
ARG 4320.0043
ILE 4330.0048
PHE 4340.0048
TYR 4350.0046
PHE 4360.0049
ASN 4370.0038
PHE 4380.0038
PHE 4390.0056
VAL 4400.0041
TYR 4410.0041
CYS 4420.0081
LEU 4430.0087
TYR 4440.0085
MET 4450.0091
ILE 4460.0111
ILE 4470.0129
PHE 4480.0117
THR 4490.0108
ALA 4500.0110
ALA 4510.0109
ALA 4520.0107
TYR 4530.0094
TYR 4540.0060
ARG 4550.0053
PRO 4560.0029
VAL 4570.0039
GLU 4580.0087
GLY 4590.0123
LEU 4600.0134
PRO 4610.0112
PRO 4620.0108
TYR 4630.0114
LYS 4640.0137
LEU 4650.0055
LYS 4660.0143
ASN 4670.0165
THR 4680.0244
VAL 4690.0264
GLY 4700.0251
ASP 4710.0130
TYR 4720.0149
PHE 4730.0225
ARG 4740.0144
VAL 4750.0129
THR 4760.0205
GLY 4770.0174
GLU 4780.0138
ILE 4790.0179
LEU 4800.0178
SER 4810.0138
VAL 4820.0141
SER 4830.0144
GLY 4840.0102
GLY 4850.0098
VAL 4860.0086
TYR 4870.0042
PHE 4880.0034
PHE 4890.0028
PHE 4900.0037
ARG 4910.0050
GLY 4920.0036
ILE 4930.0090
GLN 4940.0112
TYR 4950.0096
PHE 4960.0108
LEU 4970.0130
GLN 4980.0114
ARG 4990.0052
ARG 5000.0114
PRO 5010.0176
SER 5020.0833
LEU 5030.1107
LYS 5040.1255
SER 5050.0445
LEU 5060.0317
PHE 5070.0103
VAL 5080.0239
ASP 5090.0118
SER 5100.0039
TYR 5110.0061
SER 5120.0055
GLU 5130.0045
ILE 5140.0040
LEU 5150.0034
PHE 5160.0037
PHE 5170.0021
VAL 5180.0044
GLN 5190.0057
SER 5200.0074
LEU 5210.0077
PHE 5220.0105
MET 5230.0127
LEU 5240.0125
VAL 5250.0129
SER 5260.0134
VAL 5270.0141
VAL 5280.0164
LEU 5290.0153
TYR 5300.0129
PHE 5310.0153
SER 5320.0187
GLN 5330.0158
ARG 5340.0154
LYS 5350.0103
GLU 5360.0126
TYR 5370.0126
VAL 5380.0098
ALA 5390.0119
SER 5400.0128
MET 5410.0114
VAL 5420.0122
PHE 5430.0124
SER 5440.0105
LEU 5450.0106
ALA 5460.0105
MET 5470.0077
GLY 5480.0074
TRP 5490.0082
THR 5500.0041
ASN 5510.0028
MET 5520.0038
LEU 5530.0029
TYR 5540.0034
TYR 5550.0039
THR 5560.0041
ARG 5570.0056
GLY 5580.0064
PHE 5590.0061
GLN 5600.0082
GLN 5610.0075
MET 5620.0056
GLY 5630.0070
ILE 5640.0087
TYR 5650.0087
ALA 5660.0083
VAL 5670.0093
MET 5680.0107
ILE 5690.0105
GLU 5700.0097
LYS 5710.0111
MET 5720.0116
ILE 5730.0114
LEU 5740.0094
ARG 5750.0090
ASP 5760.0094
LEU 5770.0099
CYS 5780.0081
ARG 5790.0056
PHE 5800.0041
MET 5810.0053
PHE 5820.0046
VAL 5830.0017
TYR 5840.0014
LEU 5850.0025
VAL 5860.0025
PHE 5870.0020
LEU 5880.0020
PHE 5890.0024
GLY 5900.0024
PHE 5910.0026
SER 5920.0032
THR 5930.0033
ALA 5940.0032
VAL 5950.0039
VAL 5960.0046
THR 5970.0046
LEU 5980.0051
ILE 5990.0051
GLU 6000.0054
ASP 6010.0060
SER 6260.0060
TYR 6270.0055
ASN 6280.0057
SER 6290.0058
LEU 6300.0051
TYR 6310.0058
SER 6320.0051
THR 6330.0044
CYS 6340.0045
LEU 6350.0041
GLU 6360.0038
LEU 6370.0035
PHE 6380.0031
LYS 6390.0030
PHE 6400.0031
THR 6410.0025
ILE 6420.0028
GLY 6430.0033
MET 6440.0031
GLY 6450.0036
ASP 6460.0040
LEU 6470.0046
GLU 6480.0046
PHE 6490.0044
THR 6500.0052
GLU 6510.0052
ASN 6520.0051
TYR 6530.0052
ASP 6540.0059
PHE 6550.0063
LYS 6560.0055
ALA 6570.0058
VAL 6580.0057
PHE 6590.0049
ILE 6600.0045
ILE 6610.0047
LEU 6620.0041
LEU 6630.0038
LEU 6640.0037
ALA 6650.0038
TYR 6660.0032
VAL 6670.0025
ILE 6680.0030
LEU 6690.0031
THR 6700.0018
TYR 6710.0022
ILE 6720.0030
LEU 6730.0036
LEU 6740.0034
LEU 6750.0054
ASN 6760.0075
MET 6770.0084
LEU 6780.0088
ILE 6790.0128
ALA 6800.0126
LEU 6810.0114
MET 6820.0132
GLY 6830.0154
GLU 6840.0138
THR 6850.0108
VAL 6860.0118
ASN 6870.0126
LYS 6880.0111
ILE 6890.0119
ALA 6900.0109
GLN 6910.0118
GLU 6920.0133
SER 6930.0120
LYS 6940.0117
ASN 6950.0122
ILE 6960.0117
TRP 6970.0105
LYS 6980.0105
LEU 6990.0103
GLN 7000.0097
ARG 7010.0091
ALA 7020.0083
ILE 7030.0084
THR 7040.0081
ILE 7050.0066
LEU 7060.0066
ASP 7070.0073
THR 7080.0062
GLU 7090.0048
LYS 7100.0073
SER 7110.0113
PHE 7120.0116
LEU 7130.0231
LYS 7140.0218
CYS 7150.0297
MET 7160.0264
ARG 7170.0212
LYS 7180.0163
ALA 7190.0038
PHE 7200.0057
ARG 7210.0081
SER 7220.0122
GLY 7230.0119
LYS 7240.0171
LEU 7250.0222
LEU 7260.0241
TYR 7380.0164
ARG 7390.0099
TRP 7400.0090
CYS 7410.0103
PHE 7420.0105
ARG 7430.0105
VAL 7440.0096
ASP 7450.0106
GLU 7460.0147

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.