CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200446423711017

---  normal mode 28  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0899
VAL 2830.0387
GLY 2840.0353
ASN 2850.0230
THR 2860.0176
VAL 2870.0157
LEU 2880.0139
HIS 2890.0103
ALA 2900.0103
LEU 2910.0099
VAL 2920.0082
GLU 2930.0056
VAL 2940.0072
ALA 2950.0077
ASP 2960.0068
ASN 2970.0071
THR 2980.0145
VAL 2990.0205
ASP 3000.0218
ASN 3010.0131
THR 3020.0121
LYS 3030.0155
PHE 3040.0116
VAL 3050.0096
THR 3060.0106
SER 3070.0105
MET 3080.0099
TYR 3090.0098
ASN 3100.0103
GLU 3110.0108
ILE 3120.0118
LEU 3130.0098
ILE 3140.0102
LEU 3150.0122
GLY 3160.0143
ALA 3170.0144
LYS 3180.0158
LEU 3190.0207
HIS 3200.0205
PRO 3210.0202
THR 3220.0169
LEU 3230.0153
LYS 3240.0146
LEU 3250.0155
GLU 3260.0127
GLU 3270.0155
ILE 3280.0183
THR 3290.0154
ASN 3300.0142
ARG 3310.0243
LYS 3320.0135
GLY 3330.0127
LEU 3340.0073
THR 3350.0108
PRO 3360.0094
LEU 3370.0096
ALA 3380.0100
LEU 3390.0074
ALA 3400.0071
ALA 3410.0086
SER 3420.0096
SER 3430.0087
GLY 3440.0079
LYS 3450.0064
ILE 3460.0080
GLY 3470.0075
VAL 3480.0082
LEU 3490.0088
ALA 3500.0085
TYR 3510.0087
ILE 3520.0091
LEU 3530.0093
GLN 3540.0094
ARG 3550.0090
GLU 3560.0096
ILE 3570.0092
HIS 3580.0166
GLU 3590.0168
PRO 3600.0200
GLU 3610.0170
CYS 3620.0118
ARG 3630.0123
HIS 3640.0116
LEU 3650.0052
SER 3660.0070
ARG 3670.0108
LYS 3680.0099
PHE 3690.0096
THR 3700.0150
GLU 3710.0156
TRP 3720.0175
ALA 3730.0353
TYR 3740.0328
GLY 3750.0362
PRO 3760.0170
VAL 3770.0093
HIS 3780.0120
SER 3790.0085
SER 3800.0079
LEU 3810.0080
TYR 3820.0109
ASP 3830.0162
LEU 3840.0132
SER 3850.0184
CYS 3860.0183
ILE 3870.0130
ASP 3880.0084
THR 3890.0140
CYS 3900.0209
GLU 3910.0331
LYS 3920.0257
ASN 3930.0206
SER 3940.0145
VAL 3950.0112
LEU 3960.0101
GLU 3970.0128
VAL 3980.0126
ILE 3990.0106
ALA 4000.0110
TYR 4010.0123
SER 4020.0136
SER 4030.0150
SER 4040.0135
GLU 4050.0170
THR 4060.0133
PRO 4070.0132
ASN 4080.0111
ARG 4090.0109
HIS 4100.0108
ASP 4110.0105
MET 4120.0098
LEU 4130.0087
LEU 4140.0094
VAL 4150.0096
GLU 4160.0091
PRO 4170.0071
LEU 4180.0065
ASN 4190.0087
ARG 4200.0093
LEU 4210.0053
LEU 4220.0058
GLN 4230.0083
ASP 4240.0083
LYS 4250.0068
TRP 4260.0071
ASP 4270.0110
ARG 4280.0111
PHE 4290.0104
VAL 4300.0074
LYS 4310.0085
ARG 4320.0102
ILE 4330.0077
PHE 4340.0054
TYR 4350.0057
PHE 4360.0060
ASN 4370.0055
PHE 4380.0046
PHE 4390.0034
VAL 4400.0028
TYR 4410.0027
CYS 4420.0030
LEU 4430.0032
TYR 4440.0021
MET 4450.0015
ILE 4460.0025
ILE 4470.0030
PHE 4480.0025
THR 4490.0019
ALA 4500.0031
ALA 4510.0037
ALA 4520.0039
TYR 4530.0047
TYR 4540.0046
ARG 4550.0042
PRO 4560.0047
VAL 4570.0082
GLU 4580.0091
GLY 4590.0100
LEU 4600.0072
PRO 4610.0052
PRO 4620.0059
TYR 4630.0066
LYS 4640.0077
LEU 4650.0063
LYS 4660.0076
ASN 4670.0126
THR 4680.0124
VAL 4690.0151
GLY 4700.0127
ASP 4710.0069
TYR 4720.0086
PHE 4730.0102
ARG 4740.0071
VAL 4750.0027
THR 4760.0041
GLY 4770.0057
GLU 4780.0044
ILE 4790.0048
LEU 4800.0052
SER 4810.0043
VAL 4820.0059
SER 4830.0069
GLY 4840.0051
GLY 4850.0049
VAL 4860.0071
TYR 4870.0064
PHE 4880.0047
PHE 4890.0056
PHE 4900.0073
ARG 4910.0070
GLY 4920.0066
ILE 4930.0067
GLN 4940.0089
TYR 4950.0062
PHE 4960.0046
LEU 4970.0082
GLN 4980.0088
ARG 4990.0051
ARG 5000.0057
PRO 5010.0032
SER 5020.0126
LEU 5030.0147
LYS 5040.0216
SER 5050.0124
LEU 5060.0066
PHE 5070.0109
VAL 5080.0154
ASP 5090.0104
SER 5100.0088
TYR 5110.0107
SER 5120.0122
GLU 5130.0094
ILE 5140.0055
LEU 5150.0053
PHE 5160.0052
PHE 5170.0027
VAL 5180.0035
GLN 5190.0027
SER 5200.0045
LEU 5210.0063
PHE 5220.0059
MET 5230.0056
LEU 5240.0077
VAL 5250.0085
SER 5260.0068
VAL 5270.0079
VAL 5280.0096
LEU 5290.0065
TYR 5300.0049
PHE 5310.0070
SER 5320.0066
GLN 5330.0038
ARG 5340.0041
LYS 5350.0041
GLU 5360.0060
TYR 5370.0053
VAL 5380.0042
ALA 5390.0054
SER 5400.0059
MET 5410.0040
VAL 5420.0033
PHE 5430.0044
SER 5440.0031
LEU 5450.0021
ALA 5460.0027
MET 5470.0025
GLY 5480.0019
TRP 5490.0026
THR 5500.0040
ASN 5510.0041
MET 5520.0044
LEU 5530.0069
TYR 5540.0054
TYR 5550.0053
THR 5560.0079
ARG 5570.0054
GLY 5580.0049
PHE 5590.0069
GLN 5600.0105
GLN 5610.0146
MET 5620.0137
GLY 5630.0093
ILE 5640.0087
TYR 5650.0131
ALA 5660.0138
VAL 5670.0097
MET 5680.0137
ILE 5690.0204
GLU 5700.0194
LYS 5710.0218
MET 5720.0258
ILE 5730.0308
LEU 5740.0297
ARG 5750.0298
ASP 5760.0322
LEU 5770.0326
CYS 5780.0376
ARG 5790.0347
PHE 5800.0243
MET 5810.0226
PHE 5820.0223
VAL 5830.0138
TYR 5840.0059
LEU 5850.0058
VAL 5860.0055
PHE 5870.0084
LEU 5880.0083
PHE 5890.0133
GLY 5900.0133
PHE 5910.0121
SER 5920.0117
THR 5930.0123
ALA 5940.0101
VAL 5950.0066
VAL 5960.0074
THR 5970.0056
LEU 5980.0039
ILE 5990.0049
GLU 6000.0086
ASP 6010.0154
SER 6260.0197
TYR 6270.0140
ASN 6280.0117
SER 6290.0139
LEU 6300.0142
TYR 6310.0200
SER 6320.0150
THR 6330.0109
CYS 6340.0144
LEU 6350.0126
GLU 6360.0095
LEU 6370.0097
PHE 6380.0084
LYS 6390.0084
PHE 6400.0085
THR 6410.0081
ILE 6420.0094
GLY 6430.0095
MET 6440.0088
GLY 6450.0079
ASP 6460.0073
LEU 6470.0072
GLU 6480.0057
PHE 6490.0095
THR 6500.0120
GLU 6510.0142
ASN 6520.0140
TYR 6530.0105
ASP 6540.0128
PHE 6550.0132
LYS 6560.0088
ALA 6570.0084
VAL 6580.0079
PHE 6590.0023
ILE 6600.0028
ILE 6610.0059
LEU 6620.0079
LEU 6630.0087
LEU 6640.0097
ALA 6650.0108
TYR 6660.0100
VAL 6670.0109
ILE 6680.0119
LEU 6690.0093
THR 6700.0057
TYR 6710.0069
ILE 6720.0078
LEU 6730.0094
LEU 6740.0086
LEU 6750.0104
ASN 6760.0120
MET 6770.0237
LEU 6780.0285
ILE 6790.0303
ALA 6800.0308
LEU 6810.0361
MET 6820.0363
GLY 6830.0324
GLU 6840.0306
THR 6850.0292
VAL 6860.0222
ASN 6870.0186
LYS 6880.0218
ILE 6890.0171
ALA 6900.0131
GLN 6910.0164
GLU 6920.0149
SER 6930.0099
LYS 6940.0118
ASN 6950.0111
ILE 6960.0090
TRP 6970.0071
LYS 6980.0078
LEU 6990.0072
GLN 7000.0048
ARG 7010.0055
ALA 7020.0051
ILE 7030.0049
THR 7040.0032
ILE 7050.0028
LEU 7060.0027
ASP 7070.0045
THR 7080.0066
GLU 7090.0051
LYS 7100.0063
SER 7110.0183
PHE 7120.0247
LEU 7130.0451
LYS 7140.0417
CYS 7150.0587
MET 7160.0546
ARG 7170.0463
LYS 7180.0314
ALA 7190.0145
PHE 7200.0118
ARG 7210.0112
SER 7220.0284
GLY 7230.0357
LYS 7240.0578
LEU 7250.0818
LEU 7260.0899
TYR 7380.0556
ARG 7390.0402
TRP 7400.0270
CYS 7410.0217
PHE 7420.0149
ARG 7430.0162
VAL 7440.0121
ASP 7450.0145
GLU 7460.0151

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.