CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200446423711017

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0515
VAL 2830.0176
GLY 2840.0174
ASN 2850.0097
THR 2860.0136
VAL 2870.0161
LEU 2880.0163
HIS 2890.0139
ALA 2900.0152
LEU 2910.0142
VAL 2920.0145
GLU 2930.0155
VAL 2940.0164
ALA 2950.0168
ASP 2960.0259
ASN 2970.0260
THR 2980.0388
VAL 2990.0515
ASP 3000.0396
ASN 3010.0118
THR 3020.0197
LYS 3030.0195
PHE 3040.0105
VAL 3050.0040
THR 3060.0036
SER 3070.0057
MET 3080.0068
TYR 3090.0070
ASN 3100.0078
GLU 3110.0088
ILE 3120.0086
LEU 3130.0078
ILE 3140.0147
LEU 3150.0169
GLY 3160.0156
ALA 3170.0128
LYS 3180.0169
LEU 3190.0184
HIS 3200.0158
PRO 3210.0057
THR 3220.0133
LEU 3230.0138
LYS 3240.0095
LEU 3250.0112
GLU 3260.0110
GLU 3270.0102
ILE 3280.0141
THR 3290.0110
ASN 3300.0078
ARG 3310.0129
LYS 3320.0123
GLY 3330.0110
LEU 3340.0126
THR 3350.0138
PRO 3360.0137
LEU 3370.0117
ALA 3380.0121
LEU 3390.0126
ALA 3400.0118
ALA 3410.0111
SER 3420.0104
SER 3430.0102
GLY 3440.0101
LYS 3450.0117
ILE 3460.0074
GLY 3470.0089
VAL 3480.0073
LEU 3490.0059
ALA 3500.0060
TYR 3510.0059
ILE 3520.0068
LEU 3530.0051
GLN 3540.0055
ARG 3550.0074
GLU 3560.0116
ILE 3570.0102
HIS 3580.0174
GLU 3590.0080
PRO 3600.0247
GLU 3610.0147
CYS 3620.0099
ARG 3630.0093
HIS 3640.0073
LEU 3650.0041
SER 3660.0045
ARG 3670.0044
LYS 3680.0095
PHE 3690.0158
THR 3700.0309
GLU 3710.0332
TRP 3720.0225
ALA 3730.0426
TYR 3740.0356
GLY 3750.0478
PRO 3760.0176
VAL 3770.0279
HIS 3780.0279
SER 3790.0257
SER 3800.0211
LEU 3810.0185
TYR 3820.0086
ASP 3830.0078
LEU 3840.0081
SER 3850.0110
CYS 3860.0112
ILE 3870.0101
ASP 3880.0105
THR 3890.0117
CYS 3900.0164
GLU 3910.0306
LYS 3920.0260
ASN 3930.0160
SER 3940.0103
VAL 3950.0100
LEU 3960.0100
GLU 3970.0110
VAL 3980.0120
ILE 3990.0100
ALA 4000.0065
TYR 4010.0145
SER 4020.0143
SER 4030.0184
SER 4040.0139
GLU 4050.0133
THR 4060.0087
PRO 4070.0084
ASN 4080.0084
ARG 4090.0111
HIS 4100.0112
ASP 4110.0121
MET 4120.0094
LEU 4130.0100
LEU 4140.0107
VAL 4150.0113
GLU 4160.0088
PRO 4170.0087
LEU 4180.0092
ASN 4190.0096
ARG 4200.0108
LEU 4210.0095
LEU 4220.0096
GLN 4230.0096
ASP 4240.0098
LYS 4250.0084
TRP 4260.0080
ASP 4270.0095
ARG 4280.0091
PHE 4290.0087
VAL 4300.0072
LYS 4310.0063
ARG 4320.0050
ILE 4330.0065
PHE 4340.0048
TYR 4350.0041
PHE 4360.0118
ASN 4370.0125
PHE 4380.0081
PHE 4390.0161
VAL 4400.0208
TYR 4410.0120
CYS 4420.0158
LEU 4430.0216
TYR 4440.0155
MET 4450.0118
ILE 4460.0172
ILE 4470.0160
PHE 4480.0127
THR 4490.0159
ALA 4500.0176
ALA 4510.0113
ALA 4520.0161
TYR 4530.0292
TYR 4540.0265
ARG 4550.0234
PRO 4560.0235
VAL 4570.0299
GLU 4580.0282
GLY 4590.0244
LEU 4600.0147
PRO 4610.0125
PRO 4620.0143
TYR 4630.0249
LYS 4640.0259
LEU 4650.0160
LYS 4660.0153
ASN 4670.0136
THR 4680.0165
VAL 4690.0170
GLY 4700.0159
ASP 4710.0057
TYR 4720.0114
PHE 4730.0190
ARG 4740.0169
VAL 4750.0147
THR 4760.0165
GLY 4770.0114
GLU 4780.0089
ILE 4790.0112
LEU 4800.0110
SER 4810.0098
VAL 4820.0111
SER 4830.0147
GLY 4840.0126
GLY 4850.0114
VAL 4860.0073
TYR 4870.0129
PHE 4880.0108
PHE 4890.0046
PHE 4900.0136
ARG 4910.0214
GLY 4920.0199
ILE 4930.0185
GLN 4940.0301
TYR 4950.0306
PHE 4960.0238
LEU 4970.0305
GLN 4980.0391
ARG 4990.0332
ARG 5000.0275
PRO 5010.0274
SER 5020.0295
LEU 5030.0167
LYS 5040.0151
SER 5050.0170
LEU 5060.0239
PHE 5070.0265
VAL 5080.0206
ASP 5090.0237
SER 5100.0287
TYR 5110.0286
SER 5120.0287
GLU 5130.0255
ILE 5140.0237
LEU 5150.0208
PHE 5160.0151
PHE 5170.0084
VAL 5180.0104
GLN 5190.0102
SER 5200.0076
LEU 5210.0069
PHE 5220.0102
MET 5230.0124
LEU 5240.0125
VAL 5250.0142
SER 5260.0177
VAL 5270.0197
VAL 5280.0187
LEU 5290.0144
TYR 5300.0125
PHE 5310.0077
SER 5320.0105
GLN 5330.0032
ARG 5340.0049
LYS 5350.0068
GLU 5360.0127
TYR 5370.0154
VAL 5380.0125
ALA 5390.0132
SER 5400.0139
MET 5410.0107
VAL 5420.0093
PHE 5430.0071
SER 5440.0067
LEU 5450.0070
ALA 5460.0076
MET 5470.0084
GLY 5480.0043
TRP 5490.0055
THR 5500.0109
ASN 5510.0088
MET 5520.0046
LEU 5530.0060
TYR 5540.0073
TYR 5550.0059
THR 5560.0077
ARG 5570.0084
GLY 5580.0089
PHE 5590.0089
GLN 5600.0125
GLN 5610.0155
MET 5620.0137
GLY 5630.0129
ILE 5640.0136
TYR 5650.0130
ALA 5660.0128
VAL 5670.0127
MET 5680.0118
ILE 5690.0158
GLU 5700.0171
LYS 5710.0130
MET 5720.0122
ILE 5730.0167
LEU 5740.0176
ARG 5750.0155
ASP 5760.0148
LEU 5770.0098
CYS 5780.0087
ARG 5790.0150
PHE 5800.0137
MET 5810.0165
PHE 5820.0267
VAL 5830.0177
TYR 5840.0118
LEU 5850.0163
VAL 5860.0083
PHE 5870.0047
LEU 5880.0045
PHE 5890.0049
GLY 5900.0034
PHE 5910.0042
SER 5920.0061
THR 5930.0073
ALA 5940.0065
VAL 5950.0042
VAL 5960.0044
THR 5970.0049
LEU 5980.0046
ILE 5990.0021
GLU 6000.0047
ASP 6010.0102
SER 6260.0120
TYR 6270.0072
ASN 6280.0060
SER 6290.0072
LEU 6300.0080
TYR 6310.0117
SER 6320.0068
THR 6330.0042
CYS 6340.0053
LEU 6350.0032
GLU 6360.0030
LEU 6370.0026
PHE 6380.0040
LYS 6390.0059
PHE 6400.0032
THR 6410.0052
ILE 6420.0084
GLY 6430.0064
MET 6440.0076
GLY 6450.0048
ASP 6460.0075
LEU 6470.0056
GLU 6480.0035
PHE 6490.0038
THR 6500.0060
GLU 6510.0081
ASN 6520.0082
TYR 6530.0061
ASP 6540.0085
PHE 6550.0082
LYS 6560.0021
ALA 6570.0031
VAL 6580.0046
PHE 6590.0034
ILE 6600.0050
ILE 6610.0060
LEU 6620.0053
LEU 6630.0055
LEU 6640.0069
ALA 6650.0077
TYR 6660.0044
VAL 6670.0045
ILE 6680.0092
LEU 6690.0099
THR 6700.0075
TYR 6710.0067
ILE 6720.0106
LEU 6730.0139
LEU 6740.0114
LEU 6750.0121
ASN 6760.0151
MET 6770.0143
LEU 6780.0116
ILE 6790.0151
ALA 6800.0173
LEU 6810.0173
MET 6820.0168
GLY 6830.0264
GLU 6840.0320
THR 6850.0245
VAL 6860.0214
ASN 6870.0272
LYS 6880.0188
ILE 6890.0258
ALA 6900.0265
GLN 6910.0296
GLU 6920.0223
SER 6930.0176
LYS 6940.0185
ASN 6950.0137
ILE 6960.0128
TRP 6970.0099
LYS 6980.0081
LEU 6990.0090
GLN 7000.0081
ARG 7010.0052
ALA 7020.0066
ILE 7030.0094
THR 7040.0068
ILE 7050.0062
LEU 7060.0080
ASP 7070.0094
THR 7080.0091
GLU 7090.0090
LYS 7100.0115
SER 7110.0129
PHE 7120.0108
LEU 7130.0090
LYS 7140.0118
CYS 7150.0181
MET 7160.0131
ARG 7170.0166
LYS 7180.0178
ALA 7190.0118
PHE 7200.0113
ARG 7210.0110
SER 7220.0049
GLY 7230.0079
LYS 7240.0096
LEU 7250.0174
LEU 7260.0273
TYR 7380.0122
ARG 7390.0113
TRP 7400.0077
CYS 7410.0105
PHE 7420.0118
ARG 7430.0181
VAL 7440.0193
ASP 7450.0297
GLU 7460.0292

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.