CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200446423711017

---  normal mode 76  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0839
VAL 2830.0839
GLY 2840.0597
ASN 2850.0239
THR 2860.0229
VAL 2870.0253
LEU 2880.0268
HIS 2890.0183
ALA 2900.0147
LEU 2910.0137
VAL 2920.0095
GLU 2930.0058
VAL 2940.0124
ALA 2950.0232
ASP 2960.0439
ASN 2970.0486
THR 2980.0579
VAL 2990.0323
ASP 3000.0335
ASN 3010.0167
THR 3020.0240
LYS 3030.0317
PHE 3040.0106
VAL 3050.0045
THR 3060.0123
SER 3070.0139
MET 3080.0156
TYR 3090.0161
ASN 3100.0186
GLU 3110.0271
ILE 3120.0287
LEU 3130.0191
ILE 3140.0224
LEU 3150.0306
GLY 3160.0298
ALA 3170.0139
LYS 3180.0126
LEU 3190.0431
HIS 3200.0470
PRO 3210.0149
THR 3220.0366
LEU 3230.0272
LYS 3240.0222
LEU 3250.0169
GLU 3260.0170
GLU 3270.0173
ILE 3280.0241
THR 3290.0184
ASN 3300.0114
ARG 3310.0233
LYS 3320.0234
GLY 3330.0241
LEU 3340.0185
THR 3350.0208
PRO 3360.0184
LEU 3370.0174
ALA 3380.0195
LEU 3390.0170
ALA 3400.0184
ALA 3410.0218
SER 3420.0173
SER 3430.0168
GLY 3440.0263
LYS 3450.0270
ILE 3460.0292
GLY 3470.0242
VAL 3480.0192
LEU 3490.0202
ALA 3500.0187
TYR 3510.0120
ILE 3520.0121
LEU 3530.0115
GLN 3540.0091
ARG 3550.0039
GLU 3560.0037
ILE 3570.0035
HIS 3580.0107
GLU 3590.0128
PRO 3600.0075
GLU 3610.0147
CYS 3620.0103
ARG 3630.0087
HIS 3640.0090
LEU 3650.0068
SER 3660.0077
ARG 3670.0075
LYS 3680.0064
PHE 3690.0064
THR 3700.0105
GLU 3710.0083
TRP 3720.0053
ALA 3730.0040
TYR 3740.0040
GLY 3750.0100
PRO 3760.0076
VAL 3770.0058
HIS 3780.0063
SER 3790.0049
SER 3800.0048
LEU 3810.0064
TYR 3820.0084
ASP 3830.0108
LEU 3840.0112
SER 3850.0148
CYS 3860.0136
ILE 3870.0131
ASP 3880.0136
THR 3890.0167
CYS 3900.0176
GLU 3910.0270
LYS 3920.0169
ASN 3930.0164
SER 3940.0143
VAL 3950.0131
LEU 3960.0090
GLU 3970.0133
VAL 3980.0098
ILE 3990.0093
ALA 4000.0031
TYR 4010.0047
SER 4020.0071
SER 4030.0083
SER 4040.0118
GLU 4050.0176
THR 4060.0159
PRO 4070.0222
ASN 4080.0261
ARG 4090.0155
HIS 4100.0128
ASP 4110.0152
MET 4120.0179
LEU 4130.0132
LEU 4140.0118
VAL 4150.0121
GLU 4160.0069
PRO 4170.0081
LEU 4180.0092
ASN 4190.0030
ARG 4200.0049
LEU 4210.0063
LEU 4220.0081
GLN 4230.0076
ASP 4240.0117
LYS 4250.0097
TRP 4260.0101
ASP 4270.0088
ARG 4280.0051
PHE 4290.0048
VAL 4300.0034
LYS 4310.0113
ARG 4320.0155
ILE 4330.0091
PHE 4340.0060
TYR 4350.0112
PHE 4360.0110
ASN 4370.0076
PHE 4380.0078
PHE 4390.0082
VAL 4400.0035
TYR 4410.0040
CYS 4420.0109
LEU 4430.0123
TYR 4440.0112
MET 4450.0094
ILE 4460.0130
ILE 4470.0143
PHE 4480.0092
THR 4490.0074
ALA 4500.0083
ALA 4510.0073
ALA 4520.0084
TYR 4530.0110
TYR 4540.0086
ARG 4550.0085
PRO 4560.0092
VAL 4570.0113
GLU 4580.0096
GLY 4590.0165
LEU 4600.0289
PRO 4610.0096
PRO 4620.0140
TYR 4630.0045
LYS 4640.0035
LEU 4650.0030
LYS 4660.0255
ASN 4670.0329
THR 4680.0244
VAL 4690.0160
GLY 4700.0193
ASP 4710.0140
TYR 4720.0166
PHE 4730.0236
ARG 4740.0189
VAL 4750.0139
THR 4760.0125
GLY 4770.0138
GLU 4780.0148
ILE 4790.0216
LEU 4800.0220
SER 4810.0137
VAL 4820.0137
SER 4830.0139
GLY 4840.0122
GLY 4850.0093
VAL 4860.0128
TYR 4870.0125
PHE 4880.0072
PHE 4890.0134
PHE 4900.0122
ARG 4910.0050
GLY 4920.0130
ILE 4930.0119
GLN 4940.0062
TYR 4950.0067
PHE 4960.0048
LEU 4970.0135
GLN 4980.0140
ARG 4990.0157
ARG 5000.0173
PRO 5010.0081
SER 5020.0091
LEU 5030.0178
LYS 5040.0097
SER 5050.0130
LEU 5060.0155
PHE 5070.0169
VAL 5080.0125
ASP 5090.0143
SER 5100.0156
TYR 5110.0104
SER 5120.0090
GLU 5130.0094
ILE 5140.0131
LEU 5150.0107
PHE 5160.0073
PHE 5170.0129
VAL 5180.0130
GLN 5190.0078
SER 5200.0104
LEU 5210.0128
PHE 5220.0074
MET 5230.0086
LEU 5240.0116
VAL 5250.0098
SER 5260.0158
VAL 5270.0152
VAL 5280.0188
LEU 5290.0181
TYR 5300.0109
PHE 5310.0114
SER 5320.0137
GLN 5330.0109
ARG 5340.0256
LYS 5350.0173
GLU 5360.0255
TYR 5370.0210
VAL 5380.0153
ALA 5390.0121
SER 5400.0107
MET 5410.0068
VAL 5420.0053
PHE 5430.0019
SER 5440.0022
LEU 5450.0038
ALA 5460.0050
MET 5470.0035
GLY 5480.0023
TRP 5490.0059
THR 5500.0072
ASN 5510.0063
MET 5520.0064
LEU 5530.0066
TYR 5540.0052
TYR 5550.0066
THR 5560.0071
ARG 5570.0053
GLY 5580.0042
PHE 5590.0072
GLN 5600.0065
GLN 5610.0102
MET 5620.0084
GLY 5630.0083
ILE 5640.0078
TYR 5650.0090
ALA 5660.0076
VAL 5670.0057
MET 5680.0066
ILE 5690.0047
GLU 5700.0044
LYS 5710.0026
MET 5720.0027
ILE 5730.0030
LEU 5740.0059
ARG 5750.0070
ASP 5760.0055
LEU 5770.0076
CYS 5780.0164
ARG 5790.0132
PHE 5800.0026
MET 5810.0068
PHE 5820.0055
VAL 5830.0060
TYR 5840.0078
LEU 5850.0083
VAL 5860.0076
PHE 5870.0069
LEU 5880.0056
PHE 5890.0057
GLY 5900.0038
PHE 5910.0017
SER 5920.0022
THR 5930.0046
ALA 5940.0049
VAL 5950.0049
VAL 5960.0051
THR 5970.0049
LEU 5980.0068
ILE 5990.0069
GLU 6000.0079
ASP 6010.0169
SER 6260.0117
TYR 6270.0097
ASN 6280.0117
SER 6290.0129
LEU 6300.0062
TYR 6310.0175
SER 6320.0080
THR 6330.0041
CYS 6340.0060
LEU 6350.0030
GLU 6360.0027
LEU 6370.0025
PHE 6380.0063
LYS 6390.0073
PHE 6400.0062
THR 6410.0082
ILE 6420.0107
GLY 6430.0085
MET 6440.0097
GLY 6450.0075
ASP 6460.0079
LEU 6470.0060
GLU 6480.0055
PHE 6490.0057
THR 6500.0053
GLU 6510.0025
ASN 6520.0035
TYR 6530.0055
ASP 6540.0059
PHE 6550.0054
LYS 6560.0077
ALA 6570.0077
VAL 6580.0079
PHE 6590.0069
ILE 6600.0067
ILE 6610.0067
LEU 6620.0031
LEU 6630.0027
LEU 6640.0025
ALA 6650.0055
TYR 6660.0059
VAL 6670.0058
ILE 6680.0085
LEU 6690.0105
THR 6700.0105
TYR 6710.0089
ILE 6720.0103
LEU 6730.0128
LEU 6740.0119
LEU 6750.0091
ASN 6760.0116
MET 6770.0137
LEU 6780.0088
ILE 6790.0123
ALA 6800.0166
LEU 6810.0183
MET 6820.0167
GLY 6830.0129
GLU 6840.0161
THR 6850.0165
VAL 6860.0092
ASN 6870.0050
LYS 6880.0082
ILE 6890.0051
ALA 6900.0043
GLN 6910.0087
GLU 6920.0040
SER 6930.0028
LYS 6940.0036
ASN 6950.0046
ILE 6960.0055
TRP 6970.0060
LYS 6980.0057
LEU 6990.0064
GLN 7000.0056
ARG 7010.0070
ALA 7020.0069
ILE 7030.0078
THR 7040.0085
ILE 7050.0078
LEU 7060.0108
ASP 7070.0147
THR 7080.0102
GLU 7090.0155
LYS 7100.0220
SER 7110.0195
PHE 7120.0220
LEU 7130.0254
LYS 7140.0285
CYS 7150.0232
MET 7160.0176
ARG 7170.0191
LYS 7180.0273
ALA 7190.0152
PHE 7200.0140
ARG 7210.0129
SER 7220.0141
GLY 7230.0131
LYS 7240.0131
LEU 7250.0156
LEU 7260.0338
TYR 7380.0197
ARG 7390.0189
TRP 7400.0167
CYS 7410.0112
PHE 7420.0089
ARG 7430.0044
VAL 7440.0056
ASP 7450.0076
GLU 7460.0078

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.