CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200446423711017

---  normal mode 86  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0413
VAL 2830.0251
GLY 2840.0179
ASN 2850.0102
THR 2860.0088
VAL 2870.0094
LEU 2880.0096
HIS 2890.0030
ALA 2900.0038
LEU 2910.0071
VAL 2920.0090
GLU 2930.0085
VAL 2940.0094
ALA 2950.0088
ASP 2960.0123
ASN 2970.0120
THR 2980.0280
VAL 2990.0173
ASP 3000.0344
ASN 3010.0149
THR 3020.0163
LYS 3030.0275
PHE 3040.0143
VAL 3050.0113
THR 3060.0137
SER 3070.0095
MET 3080.0094
TYR 3090.0094
ASN 3100.0079
GLU 3110.0051
ILE 3120.0033
LEU 3130.0025
ILE 3140.0100
LEU 3150.0142
GLY 3160.0137
ALA 3170.0097
LYS 3180.0036
LEU 3190.0173
HIS 3200.0157
PRO 3210.0063
THR 3220.0104
LEU 3230.0120
LYS 3240.0157
LEU 3250.0149
GLU 3260.0145
GLU 3270.0149
ILE 3280.0195
THR 3290.0148
ASN 3300.0103
ARG 3310.0256
LYS 3320.0250
GLY 3330.0391
LEU 3340.0112
THR 3350.0090
PRO 3360.0075
LEU 3370.0098
ALA 3380.0045
LEU 3390.0059
ALA 3400.0099
ALA 3410.0104
SER 3420.0098
SER 3430.0113
GLY 3440.0130
LYS 3450.0137
ILE 3460.0144
GLY 3470.0153
VAL 3480.0129
LEU 3490.0124
ALA 3500.0150
TYR 3510.0151
ILE 3520.0155
LEU 3530.0130
GLN 3540.0133
ARG 3550.0158
GLU 3560.0110
ILE 3570.0108
HIS 3580.0047
GLU 3590.0083
PRO 3600.0172
GLU 3610.0168
CYS 3620.0125
ARG 3630.0120
HIS 3640.0170
LEU 3650.0171
SER 3660.0139
ARG 3670.0127
LYS 3680.0075
PHE 3690.0055
THR 3700.0299
GLU 3710.0337
TRP 3720.0271
ALA 3730.0203
TYR 3740.0137
GLY 3750.0260
PRO 3760.0383
VAL 3770.0161
HIS 3780.0242
SER 3790.0329
SER 3800.0260
LEU 3810.0228
TYR 3820.0030
ASP 3830.0092
LEU 3840.0156
SER 3850.0120
CYS 3860.0099
ILE 3870.0114
ASP 3880.0148
THR 3890.0123
CYS 3900.0121
GLU 3910.0228
LYS 3920.0122
ASN 3930.0157
SER 3940.0105
VAL 3950.0107
LEU 3960.0105
GLU 3970.0129
VAL 3980.0105
ILE 3990.0108
ALA 4000.0112
TYR 4010.0136
SER 4020.0155
SER 4030.0136
SER 4040.0206
GLU 4050.0177
THR 4060.0143
PRO 4070.0176
ASN 4080.0140
ARG 4090.0144
HIS 4100.0153
ASP 4110.0153
MET 4120.0104
LEU 4130.0114
LEU 4140.0121
VAL 4150.0166
GLU 4160.0154
PRO 4170.0096
LEU 4180.0059
ASN 4190.0107
ARG 4200.0122
LEU 4210.0033
LEU 4220.0041
GLN 4230.0063
ASP 4240.0089
LYS 4250.0076
TRP 4260.0073
ASP 4270.0130
ARG 4280.0138
PHE 4290.0113
VAL 4300.0097
LYS 4310.0163
ARG 4320.0259
ILE 4330.0157
PHE 4340.0079
TYR 4350.0063
PHE 4360.0093
ASN 4370.0099
PHE 4380.0085
PHE 4390.0201
VAL 4400.0193
TYR 4410.0069
CYS 4420.0116
LEU 4430.0117
TYR 4440.0032
MET 4450.0041
ILE 4460.0061
ILE 4470.0041
PHE 4480.0048
THR 4490.0050
ALA 4500.0035
ALA 4510.0035
ALA 4520.0029
TYR 4530.0061
TYR 4540.0035
ARG 4550.0052
PRO 4560.0071
VAL 4570.0057
GLU 4580.0055
GLY 4590.0069
LEU 4600.0083
PRO 4610.0065
PRO 4620.0078
TYR 4630.0036
LYS 4640.0042
LEU 4650.0016
LYS 4660.0020
ASN 4670.0030
THR 4680.0036
VAL 4690.0057
GLY 4700.0042
ASP 4710.0022
TYR 4720.0033
PHE 4730.0060
ARG 4740.0043
VAL 4750.0073
THR 4760.0093
GLY 4770.0059
GLU 4780.0049
ILE 4790.0100
LEU 4800.0108
SER 4810.0075
VAL 4820.0081
SER 4830.0148
GLY 4840.0159
GLY 4850.0129
VAL 4860.0145
TYR 4870.0163
PHE 4880.0141
PHE 4890.0118
PHE 4900.0101
ARG 4910.0107
GLY 4920.0104
ILE 4930.0104
GLN 4940.0095
TYR 4950.0101
PHE 4960.0162
LEU 4970.0173
GLN 4980.0155
ARG 4990.0168
ARG 5000.0276
PRO 5010.0203
SER 5020.0338
LEU 5030.0124
LYS 5040.0255
SER 5050.0221
LEU 5060.0177
PHE 5070.0178
VAL 5080.0140
ASP 5090.0146
SER 5100.0143
TYR 5110.0117
SER 5120.0067
GLU 5130.0041
ILE 5140.0058
LEU 5150.0077
PHE 5160.0074
PHE 5170.0077
VAL 5180.0073
GLN 5190.0082
SER 5200.0071
LEU 5210.0068
PHE 5220.0044
MET 5230.0039
LEU 5240.0039
VAL 5250.0018
SER 5260.0043
VAL 5270.0041
VAL 5280.0048
LEU 5290.0080
TYR 5300.0073
PHE 5310.0098
SER 5320.0125
GLN 5330.0098
ARG 5340.0083
LYS 5350.0047
GLU 5360.0062
TYR 5370.0072
VAL 5380.0060
ALA 5390.0058
SER 5400.0034
MET 5410.0018
VAL 5420.0037
PHE 5430.0048
SER 5440.0065
LEU 5450.0047
ALA 5460.0071
MET 5470.0083
GLY 5480.0061
TRP 5490.0060
THR 5500.0094
ASN 5510.0080
MET 5520.0052
LEU 5530.0024
TYR 5540.0038
TYR 5550.0044
THR 5560.0057
ARG 5570.0061
GLY 5580.0101
PHE 5590.0142
GLN 5600.0159
GLN 5610.0090
MET 5620.0066
GLY 5630.0055
ILE 5640.0108
TYR 5650.0185
ALA 5660.0093
VAL 5670.0111
MET 5680.0173
ILE 5690.0159
GLU 5700.0142
LYS 5710.0118
MET 5720.0060
ILE 5730.0057
LEU 5740.0083
ARG 5750.0175
ASP 5760.0180
LEU 5770.0279
CYS 5780.0330
ARG 5790.0347
PHE 5800.0261
MET 5810.0293
PHE 5820.0240
VAL 5830.0214
TYR 5840.0231
LEU 5850.0277
VAL 5860.0240
PHE 5870.0204
LEU 5880.0184
PHE 5890.0138
GLY 5900.0160
PHE 5910.0146
SER 5920.0093
THR 5930.0184
ALA 5940.0213
VAL 5950.0122
VAL 5960.0103
THR 5970.0172
LEU 5980.0161
ILE 5990.0168
GLU 6000.0185
ASP 6010.0406
SER 6260.0121
TYR 6270.0116
ASN 6280.0158
SER 6290.0185
LEU 6300.0342
TYR 6310.0413
SER 6320.0168
THR 6330.0046
CYS 6340.0083
LEU 6350.0119
GLU 6360.0087
LEU 6370.0059
PHE 6380.0092
LYS 6390.0057
PHE 6400.0048
THR 6410.0120
ILE 6420.0244
GLY 6430.0263
MET 6440.0100
GLY 6450.0083
ASP 6460.0167
LEU 6470.0136
GLU 6480.0113
PHE 6490.0149
THR 6500.0241
GLU 6510.0218
ASN 6520.0244
TYR 6530.0199
ASP 6540.0158
PHE 6550.0216
LYS 6560.0227
ALA 6570.0178
VAL 6580.0123
PHE 6590.0098
ILE 6600.0137
ILE 6610.0136
LEU 6620.0120
LEU 6630.0131
LEU 6640.0158
ALA 6650.0105
TYR 6660.0105
VAL 6670.0108
ILE 6680.0091
LEU 6690.0091
THR 6700.0120
TYR 6710.0151
ILE 6720.0180
LEU 6730.0171
LEU 6740.0162
LEU 6750.0173
ASN 6760.0204
MET 6770.0165
LEU 6780.0110
ILE 6790.0070
ALA 6800.0102
LEU 6810.0132
MET 6820.0153
GLY 6830.0244
GLU 6840.0195
THR 6850.0135
VAL 6860.0136
ASN 6870.0134
LYS 6880.0192
ILE 6890.0180
ALA 6900.0127
GLN 6910.0209
GLU 6920.0175
SER 6930.0104
LYS 6940.0179
ASN 6950.0150
ILE 6960.0106
TRP 6970.0126
LYS 6980.0150
LEU 6990.0129
GLN 7000.0121
ARG 7010.0112
ALA 7020.0114
ILE 7030.0121
THR 7040.0084
ILE 7050.0058
LEU 7060.0075
ASP 7070.0082
THR 7080.0028
GLU 7090.0029
LYS 7100.0054
SER 7110.0046
PHE 7120.0048
LEU 7130.0033
LYS 7140.0069
CYS 7150.0106
MET 7160.0082
ARG 7170.0222
LYS 7180.0353
ALA 7190.0228
PHE 7200.0205
ARG 7210.0169
SER 7220.0272
GLY 7230.0229
LYS 7240.0284
LEU 7250.0255
LEU 7260.0192
TYR 7380.0180
ARG 7390.0125
TRP 7400.0174
CYS 7410.0140
PHE 7420.0058
ARG 7430.0175
VAL 7440.0320
ASP 7450.0361
GLU 7460.0359

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.