CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200446423711017

---  normal mode 92  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0575
VAL 2830.0229
GLY 2840.0125
ASN 2850.0059
THR 2860.0030
VAL 2870.0062
LEU 2880.0062
HIS 2890.0042
ALA 2900.0059
LEU 2910.0072
VAL 2920.0055
GLU 2930.0038
VAL 2940.0037
ALA 2950.0037
ASP 2960.0124
ASN 2970.0133
THR 2980.0362
VAL 2990.0180
ASP 3000.0243
ASN 3010.0133
THR 3020.0091
LYS 3030.0222
PHE 3040.0138
VAL 3050.0077
THR 3060.0075
SER 3070.0062
MET 3080.0047
TYR 3090.0039
ASN 3100.0061
GLU 3110.0109
ILE 3120.0111
LEU 3130.0076
ILE 3140.0109
LEU 3150.0152
GLY 3160.0096
ALA 3170.0086
LYS 3180.0074
LEU 3190.0067
HIS 3200.0100
PRO 3210.0127
THR 3220.0278
LEU 3230.0174
LYS 3240.0083
LEU 3250.0037
GLU 3260.0055
GLU 3270.0056
ILE 3280.0042
THR 3290.0058
ASN 3300.0024
ARG 3310.0144
LYS 3320.0178
GLY 3330.0253
LEU 3340.0082
THR 3350.0059
PRO 3360.0045
LEU 3370.0046
ALA 3380.0065
LEU 3390.0046
ALA 3400.0005
ALA 3410.0061
SER 3420.0109
SER 3430.0086
GLY 3440.0065
LYS 3450.0079
ILE 3460.0090
GLY 3470.0089
VAL 3480.0066
LEU 3490.0039
ALA 3500.0077
TYR 3510.0061
ILE 3520.0062
LEU 3530.0076
GLN 3540.0102
ARG 3550.0094
GLU 3560.0156
ILE 3570.0187
HIS 3580.0246
GLU 3590.0246
PRO 3600.0398
GLU 3610.0173
CYS 3620.0175
ARG 3630.0194
HIS 3640.0124
LEU 3650.0069
SER 3660.0103
ARG 3670.0082
LYS 3680.0087
PHE 3690.0115
THR 3700.0015
GLU 3710.0058
TRP 3720.0108
ALA 3730.0103
TYR 3740.0078
GLY 3750.0106
PRO 3760.0039
VAL 3770.0029
HIS 3780.0050
SER 3790.0054
SER 3800.0028
LEU 3810.0051
TYR 3820.0034
ASP 3830.0029
LEU 3840.0064
SER 3850.0106
CYS 3860.0106
ILE 3870.0107
ASP 3880.0119
THR 3890.0099
CYS 3900.0135
GLU 3910.0243
LYS 3920.0143
ASN 3930.0065
SER 3940.0123
VAL 3950.0134
LEU 3960.0152
GLU 3970.0169
VAL 3980.0144
ILE 3990.0179
ALA 4000.0214
TYR 4010.0235
SER 4020.0233
SER 4030.0478
SER 4040.0575
GLU 4050.0540
THR 4060.0335
PRO 4070.0301
ASN 4080.0129
ARG 4090.0220
HIS 4100.0170
ASP 4110.0103
MET 4120.0094
LEU 4130.0160
LEU 4140.0163
VAL 4150.0147
GLU 4160.0133
PRO 4170.0125
LEU 4180.0123
ASN 4190.0119
ARG 4200.0100
LEU 4210.0090
LEU 4220.0096
GLN 4230.0081
ASP 4240.0052
LYS 4250.0070
TRP 4260.0067
ASP 4270.0088
ARG 4280.0073
PHE 4290.0089
VAL 4300.0133
LYS 4310.0132
ARG 4320.0202
ILE 4330.0187
PHE 4340.0174
TYR 4350.0165
PHE 4360.0149
ASN 4370.0132
PHE 4380.0149
PHE 4390.0316
VAL 4400.0289
TYR 4410.0161
CYS 4420.0150
LEU 4430.0127
TYR 4440.0068
MET 4450.0054
ILE 4460.0112
ILE 4470.0132
PHE 4480.0135
THR 4490.0142
ALA 4500.0157
ALA 4510.0101
ALA 4520.0092
TYR 4530.0095
TYR 4540.0012
ARG 4550.0033
PRO 4560.0094
VAL 4570.0170
GLU 4580.0102
GLY 4590.0032
LEU 4600.0017
PRO 4610.0054
PRO 4620.0088
TYR 4630.0053
LYS 4640.0065
LEU 4650.0057
LYS 4660.0169
ASN 4670.0239
THR 4680.0222
VAL 4690.0109
GLY 4700.0150
ASP 4710.0124
TYR 4720.0102
PHE 4730.0153
ARG 4740.0130
VAL 4750.0096
THR 4760.0099
GLY 4770.0089
GLU 4780.0101
ILE 4790.0157
LEU 4800.0177
SER 4810.0121
VAL 4820.0099
SER 4830.0114
GLY 4840.0069
GLY 4850.0059
VAL 4860.0115
TYR 4870.0117
PHE 4880.0087
PHE 4890.0114
PHE 4900.0153
ARG 4910.0149
GLY 4920.0135
ILE 4930.0116
GLN 4940.0127
TYR 4950.0126
PHE 4960.0048
LEU 4970.0051
GLN 4980.0130
ARG 4990.0114
ARG 5000.0085
PRO 5010.0063
SER 5020.0108
LEU 5030.0186
LYS 5040.0127
SER 5050.0119
LEU 5060.0140
PHE 5070.0131
VAL 5080.0104
ASP 5090.0138
SER 5100.0156
TYR 5110.0025
SER 5120.0027
GLU 5130.0029
ILE 5140.0060
LEU 5150.0055
PHE 5160.0057
PHE 5170.0063
VAL 5180.0050
GLN 5190.0033
SER 5200.0024
LEU 5210.0063
PHE 5220.0041
MET 5230.0030
LEU 5240.0075
VAL 5250.0074
SER 5260.0059
VAL 5270.0084
VAL 5280.0097
LEU 5290.0062
TYR 5300.0073
PHE 5310.0069
SER 5320.0041
GLN 5330.0033
ARG 5340.0047
LYS 5350.0080
GLU 5360.0072
TYR 5370.0056
VAL 5380.0046
ALA 5390.0032
SER 5400.0034
MET 5410.0067
VAL 5420.0136
PHE 5430.0128
SER 5440.0072
LEU 5450.0114
ALA 5460.0148
MET 5470.0088
GLY 5480.0062
TRP 5490.0094
THR 5500.0084
ASN 5510.0083
MET 5520.0081
LEU 5530.0138
TYR 5540.0118
TYR 5550.0106
THR 5560.0116
ARG 5570.0092
GLY 5580.0064
PHE 5590.0082
GLN 5600.0140
GLN 5610.0270
MET 5620.0222
GLY 5630.0130
ILE 5640.0164
TYR 5650.0228
ALA 5660.0161
VAL 5670.0095
MET 5680.0096
ILE 5690.0057
GLU 5700.0092
LYS 5710.0058
MET 5720.0056
ILE 5730.0064
LEU 5740.0066
ARG 5750.0071
ASP 5760.0051
LEU 5770.0034
CYS 5780.0110
ARG 5790.0154
PHE 5800.0107
MET 5810.0066
PHE 5820.0087
VAL 5830.0097
TYR 5840.0093
LEU 5850.0072
VAL 5860.0093
PHE 5870.0098
LEU 5880.0091
PHE 5890.0061
GLY 5900.0094
PHE 5910.0094
SER 5920.0073
THR 5930.0118
ALA 5940.0119
VAL 5950.0038
VAL 5960.0118
THR 5970.0163
LEU 5980.0092
ILE 5990.0064
GLU 6000.0045
ASP 6010.0267
SER 6260.0133
TYR 6270.0155
ASN 6280.0179
SER 6290.0330
LEU 6300.0212
TYR 6310.0236
SER 6320.0154
THR 6330.0036
CYS 6340.0041
LEU 6350.0091
GLU 6360.0121
LEU 6370.0129
PHE 6380.0162
LYS 6390.0168
PHE 6400.0138
THR 6410.0134
ILE 6420.0237
GLY 6430.0337
MET 6440.0425
GLY 6450.0208
ASP 6460.0188
LEU 6470.0092
GLU 6480.0096
PHE 6490.0111
THR 6500.0156
GLU 6510.0155
ASN 6520.0093
TYR 6530.0072
ASP 6540.0121
PHE 6550.0187
LYS 6560.0220
ALA 6570.0235
VAL 6580.0174
PHE 6590.0071
ILE 6600.0067
ILE 6610.0044
LEU 6620.0047
LEU 6630.0050
LEU 6640.0082
ALA 6650.0125
TYR 6660.0112
VAL 6670.0101
ILE 6680.0080
LEU 6690.0075
THR 6700.0043
TYR 6710.0068
ILE 6720.0103
LEU 6730.0134
LEU 6740.0107
LEU 6750.0047
ASN 6760.0132
MET 6770.0189
LEU 6780.0109
ILE 6790.0096
ALA 6800.0115
LEU 6810.0086
MET 6820.0072
GLY 6830.0309
GLU 6840.0324
THR 6850.0273
VAL 6860.0216
ASN 6870.0202
LYS 6880.0306
ILE 6890.0176
ALA 6900.0167
GLN 6910.0142
GLU 6920.0074
SER 6930.0097
LYS 6940.0147
ASN 6950.0183
ILE 6960.0183
TRP 6970.0180
LYS 6980.0157
LEU 6990.0197
GLN 7000.0152
ARG 7010.0107
ALA 7020.0120
ILE 7030.0126
THR 7040.0126
ILE 7050.0095
LEU 7060.0131
ASP 7070.0145
THR 7080.0133
GLU 7090.0127
LYS 7100.0139
SER 7110.0130
PHE 7120.0085
LEU 7130.0101
LYS 7140.0086
CYS 7150.0124
MET 7160.0058
ARG 7170.0062
LYS 7180.0059
ALA 7190.0179
PHE 7200.0121
ARG 7210.0085
SER 7220.0339
GLY 7230.0280
LYS 7240.0376
LEU 7250.0479
LEU 7260.0465
TYR 7380.0325
ARG 7390.0275
TRP 7400.0233
CYS 7410.0116
PHE 7420.0069
ARG 7430.0045
VAL 7440.0048
ASP 7450.0041
GLU 7460.0045

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.