CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200937413814354

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0745
VAL 2830.0419
GLY 2840.0257
ASN 2850.0164
THR 2860.0093
VAL 2870.0043
LEU 2880.0067
HIS 2890.0085
ALA 2900.0060
LEU 2910.0060
VAL 2920.0102
GLU 2930.0101
VAL 2940.0095
ALA 2950.0133
ASP 2960.0166
ASN 2970.0140
THR 2980.0206
VAL 2990.0211
ASP 3000.0184
ASN 3010.0153
THR 3020.0163
LYS 3030.0156
PHE 3040.0134
VAL 3050.0126
THR 3060.0127
SER 3070.0123
MET 3080.0097
TYR 3090.0101
ASN 3100.0107
GLU 3110.0088
ILE 3120.0071
LEU 3130.0083
ILE 3140.0071
LEU 3150.0044
GLY 3160.0053
ALA 3170.0052
LYS 3180.0095
LEU 3190.0126
HIS 3200.0112
PRO 3210.0072
THR 3220.0066
LEU 3230.0080
LYS 3240.0098
LEU 3250.0116
GLU 3260.0155
GLU 3270.0201
ILE 3280.0186
THR 3290.0185
ASN 3300.0161
ARG 3310.0331
LYS 3320.0389
GLY 3330.0357
LEU 3340.0148
THR 3350.0153
PRO 3360.0108
LEU 3370.0112
ALA 3380.0094
LEU 3390.0073
ALA 3400.0087
ALA 3410.0066
SER 3420.0056
SER 3430.0087
GLY 3440.0071
LYS 3450.0088
ILE 3460.0084
GLY 3470.0106
VAL 3480.0126
LEU 3490.0112
ALA 3500.0109
TYR 3510.0118
ILE 3520.0125
LEU 3530.0106
GLN 3540.0102
ARG 3550.0141
GLU 3560.0110
ILE 3570.0082
HIS 3580.0120
GLU 3590.0181
PRO 3600.0216
GLU 3610.0144
CYS 3620.0060
ARG 3630.0046
HIS 3640.0052
LEU 3650.0077
SER 3660.0092
ARG 3670.0092
LYS 3680.0087
PHE 3690.0078
THR 3700.0073
GLU 3710.0071
TRP 3720.0056
ALA 3730.0077
TYR 3740.0090
GLY 3750.0068
PRO 3760.0107
VAL 3770.0068
HIS 3780.0031
SER 3790.0045
SER 3800.0058
LEU 3810.0070
TYR 3820.0070
ASP 3830.0077
LEU 3840.0084
SER 3850.0078
CYS 3860.0050
ILE 3870.0054
ASP 3880.0054
THR 3890.0035
CYS 3900.0032
GLU 3910.0088
LYS 3920.0085
ASN 3930.0047
SER 3940.0034
VAL 3950.0030
LEU 3960.0044
GLU 3970.0040
VAL 3980.0041
ILE 3990.0053
ALA 4000.0126
TYR 4010.0126
SER 4020.0107
SER 4030.0091
SER 4040.0096
GLU 4050.0088
THR 4060.0057
PRO 4070.0061
ASN 4080.0056
ARG 4090.0072
HIS 4100.0083
ASP 4110.0075
MET 4120.0045
LEU 4130.0053
LEU 4140.0058
VAL 4150.0053
GLU 4160.0049
PRO 4170.0053
LEU 4180.0049
ASN 4190.0046
ARG 4200.0047
LEU 4210.0067
LEU 4220.0077
GLN 4230.0086
ASP 4240.0102
LYS 4250.0101
TRP 4260.0096
ASP 4270.0094
ARG 4280.0100
PHE 4290.0095
VAL 4300.0096
LYS 4310.0081
ARG 4320.0080
ILE 4330.0075
PHE 4340.0068
TYR 4350.0050
PHE 4360.0074
ASN 4370.0098
PHE 4380.0100
PHE 4390.0116
VAL 4400.0111
TYR 4410.0128
CYS 4420.0147
LEU 4430.0111
TYR 4440.0087
MET 4450.0107
ILE 4460.0134
ILE 4470.0086
PHE 4480.0030
THR 4490.0075
ALA 4500.0090
ALA 4510.0039
ALA 4520.0034
TYR 4530.0034
TYR 4540.0073
ARG 4550.0091
PRO 4560.0150
VAL 4570.0368
GLU 4580.0274
GLY 4590.0199
LEU 4600.0180
PRO 4610.0094
PRO 4620.0045
TYR 4630.0255
LYS 4640.0421
LEU 4650.0232
LYS 4660.0358
ASN 4670.0256
THR 4680.0571
VAL 4690.0731
GLY 4700.0745
ASP 4710.0373
TYR 4720.0440
PHE 4730.0612
ARG 4740.0350
VAL 4750.0294
THR 4760.0483
GLY 4770.0275
GLU 4780.0158
ILE 4790.0268
LEU 4800.0155
SER 4810.0060
VAL 4820.0099
SER 4830.0073
GLY 4840.0147
GLY 4850.0116
VAL 4860.0140
TYR 4870.0201
PHE 4880.0163
PHE 4890.0172
PHE 4900.0229
ARG 4910.0182
GLY 4920.0188
ILE 4930.0285
GLN 4940.0243
TYR 4950.0182
PHE 4960.0320
LEU 4970.0465
GLN 4980.0398
ARG 4990.0452
ARG 5000.0621
PRO 5010.0507
SER 5020.0258
LEU 5030.0320
LYS 5040.0516
SER 5050.0170
LEU 5060.0097
PHE 5070.0074
VAL 5080.0116
ASP 5090.0123
SER 5100.0120
TYR 5110.0075
SER 5120.0070
GLU 5130.0105
ILE 5140.0120
LEU 5150.0116
PHE 5160.0132
PHE 5170.0136
VAL 5180.0121
GLN 5190.0133
SER 5200.0122
LEU 5210.0103
PHE 5220.0072
MET 5230.0051
LEU 5240.0083
VAL 5250.0077
SER 5260.0066
VAL 5270.0098
VAL 5280.0177
LEU 5290.0185
TYR 5300.0078
PHE 5310.0133
SER 5320.0248
GLN 5330.0181
ARG 5340.0271
LYS 5350.0263
GLU 5360.0281
TYR 5370.0161
VAL 5380.0133
ALA 5390.0138
SER 5400.0079
MET 5410.0033
VAL 5420.0051
PHE 5430.0070
SER 5440.0101
LEU 5450.0100
ALA 5460.0125
MET 5470.0146
GLY 5480.0130
TRP 5490.0152
THR 5500.0160
ASN 5510.0148
MET 5520.0143
LEU 5530.0104
TYR 5540.0102
TYR 5550.0082
THR 5560.0047
ARG 5570.0051
GLY 5580.0065
PHE 5590.0057
GLN 5600.0080
GLN 5610.0080
MET 5620.0058
GLY 5630.0041
ILE 5640.0041
TYR 5650.0040
ALA 5660.0051
VAL 5670.0057
MET 5680.0035
ILE 5690.0039
GLU 5700.0051
LYS 5710.0030
MET 5720.0017
ILE 5730.0037
LEU 5740.0012
ARG 5750.0017
ASP 5760.0037
LEU 5770.0079
CYS 5780.0108
ARG 5790.0112
PHE 5800.0108
MET 5810.0115
PHE 5820.0134
VAL 5830.0090
TYR 5840.0056
LEU 5850.0060
VAL 5860.0038
PHE 5870.0031
LEU 5880.0008
PHE 5890.0037
GLY 5900.0042
PHE 5910.0043
SER 5920.0043
THR 5930.0050
ALA 5940.0043
VAL 5950.0032
VAL 5960.0037
THR 5970.0034
LEU 5980.0023
ILE 5990.0019
GLU 6000.0029
ASP 6010.0059
SER 6260.0083
TYR 6270.0059
ASN 6280.0052
SER 6290.0059
LEU 6300.0061
TYR 6310.0083
SER 6320.0056
THR 6330.0041
CYS 6340.0052
LEU 6350.0038
GLU 6360.0029
LEU 6370.0030
PHE 6380.0024
LYS 6390.0031
PHE 6400.0029
THR 6410.0029
ILE 6420.0043
GLY 6430.0046
MET 6440.0035
GLY 6450.0028
ASP 6460.0032
LEU 6470.0030
GLU 6480.0019
PHE 6490.0035
THR 6500.0049
GLU 6510.0059
ASN 6520.0055
TYR 6530.0041
ASP 6540.0055
PHE 6550.0061
LYS 6560.0040
ALA 6570.0034
VAL 6580.0033
PHE 6590.0013
ILE 6600.0018
ILE 6610.0024
LEU 6620.0034
LEU 6630.0038
LEU 6640.0043
ALA 6650.0045
TYR 6660.0033
VAL 6670.0037
ILE 6680.0048
LEU 6690.0039
THR 6700.0012
TYR 6710.0020
ILE 6720.0020
LEU 6730.0046
LEU 6740.0060
LEU 6750.0067
ASN 6760.0071
MET 6770.0102
LEU 6780.0116
ILE 6790.0116
ALA 6800.0104
LEU 6810.0110
MET 6820.0093
GLY 6830.0042
GLU 6840.0084
THR 6850.0056
VAL 6860.0037
ASN 6870.0089
LYS 6880.0074
ILE 6890.0046
ALA 6900.0071
GLN 6910.0092
GLU 6920.0086
SER 6930.0078
LYS 6940.0095
ASN 6950.0105
ILE 6960.0101
TRP 6970.0097
LYS 6980.0106
LEU 6990.0111
GLN 7000.0099
ARG 7010.0114
ALA 7020.0120
ILE 7030.0118
THR 7040.0105
ILE 7050.0107
LEU 7060.0111
ASP 7070.0103
THR 7080.0093
GLU 7090.0103
LYS 7100.0111
SER 7110.0104
PHE 7120.0090
LEU 7130.0109
LYS 7140.0165
CYS 7150.0238
MET 7160.0137
ARG 7170.0114
LYS 7180.0062
ALA 7190.0095
PHE 7200.0100
ARG 7210.0099
SER 7220.0141
GLY 7230.0084
LYS 7240.0169
LEU 7250.0173
LEU 7260.0140
TYR 7380.0051
ARG 7390.0062
TRP 7400.0071
CYS 7410.0055
PHE 7420.0055
ARG 7430.0058
VAL 7440.0049
ASP 7450.0037
GLU 7460.0034

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.