CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200937413814354

---  normal mode 45  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0490
VAL 2830.0390
GLY 2840.0263
ASN 2850.0174
THR 2860.0131
VAL 2870.0129
LEU 2880.0122
HIS 2890.0100
ALA 2900.0080
LEU 2910.0090
VAL 2920.0069
GLU 2930.0069
VAL 2940.0068
ALA 2950.0055
ASP 2960.0076
ASN 2970.0074
THR 2980.0082
VAL 2990.0051
ASP 3000.0124
ASN 3010.0075
THR 3020.0052
LYS 3030.0114
PHE 3040.0108
VAL 3050.0095
THR 3060.0134
SER 3070.0163
MET 3080.0133
TYR 3090.0142
ASN 3100.0186
GLU 3110.0178
ILE 3120.0146
LEU 3130.0146
ILE 3140.0192
LEU 3150.0199
GLY 3160.0162
ALA 3170.0117
LYS 3180.0201
LEU 3190.0292
HIS 3200.0280
PRO 3210.0195
THR 3220.0249
LEU 3230.0164
LYS 3240.0094
LEU 3250.0146
GLU 3260.0172
GLU 3270.0156
ILE 3280.0212
THR 3290.0188
ASN 3300.0148
ARG 3310.0158
LYS 3320.0231
GLY 3330.0294
LEU 3340.0176
THR 3350.0168
PRO 3360.0123
LEU 3370.0097
ALA 3380.0098
LEU 3390.0079
ALA 3400.0055
ALA 3410.0071
SER 3420.0119
SER 3430.0105
GLY 3440.0099
LYS 3450.0049
ILE 3460.0035
GLY 3470.0053
VAL 3480.0068
LEU 3490.0065
ALA 3500.0081
TYR 3510.0105
ILE 3520.0117
LEU 3530.0114
GLN 3540.0120
ARG 3550.0180
GLU 3560.0170
ILE 3570.0150
HIS 3580.0216
GLU 3590.0255
PRO 3600.0255
GLU 3610.0186
CYS 3620.0136
ARG 3630.0090
HIS 3640.0038
LEU 3650.0095
SER 3660.0139
ARG 3670.0130
LYS 3680.0133
PHE 3690.0128
THR 3700.0093
GLU 3710.0048
TRP 3720.0032
ALA 3730.0168
TYR 3740.0120
GLY 3750.0124
PRO 3760.0200
VAL 3770.0196
HIS 3780.0114
SER 3790.0076
SER 3800.0096
LEU 3810.0112
TYR 3820.0117
ASP 3830.0130
LEU 3840.0152
SER 3850.0159
CYS 3860.0126
ILE 3870.0109
ASP 3880.0124
THR 3890.0123
CYS 3900.0135
GLU 3910.0274
LYS 3920.0246
ASN 3930.0112
SER 3940.0049
VAL 3950.0066
LEU 3960.0063
GLU 3970.0081
VAL 3980.0083
ILE 3990.0082
ALA 4000.0104
TYR 4010.0143
SER 4020.0168
SER 4030.0274
SER 4040.0225
GLU 4050.0338
THR 4060.0189
PRO 4070.0188
ASN 4080.0163
ARG 4090.0161
HIS 4100.0182
ASP 4110.0165
MET 4120.0090
LEU 4130.0084
LEU 4140.0097
VAL 4150.0045
GLU 4160.0052
PRO 4170.0048
LEU 4180.0064
ASN 4190.0061
ARG 4200.0066
LEU 4210.0129
LEU 4220.0118
GLN 4230.0135
ASP 4240.0171
LYS 4250.0161
TRP 4260.0165
ASP 4270.0183
ARG 4280.0169
PHE 4290.0182
VAL 4300.0201
LYS 4310.0194
ARG 4320.0214
ILE 4330.0230
PHE 4340.0201
TYR 4350.0203
PHE 4360.0270
ASN 4370.0236
PHE 4380.0192
PHE 4390.0253
VAL 4400.0243
TYR 4410.0157
CYS 4420.0179
LEU 4430.0181
TYR 4440.0099
MET 4450.0083
ILE 4460.0106
ILE 4470.0052
PHE 4480.0021
THR 4490.0041
ALA 4500.0048
ALA 4510.0076
ALA 4520.0092
TYR 4530.0179
TYR 4540.0159
ARG 4550.0111
PRO 4560.0075
VAL 4570.0126
GLU 4580.0131
GLY 4590.0187
LEU 4600.0164
PRO 4610.0140
PRO 4620.0116
TYR 4630.0081
LYS 4640.0054
LEU 4650.0036
LYS 4660.0104
ASN 4670.0161
THR 4680.0128
VAL 4690.0101
GLY 4700.0030
ASP 4710.0033
TYR 4720.0095
PHE 4730.0121
ARG 4740.0115
VAL 4750.0121
THR 4760.0123
GLY 4770.0107
GLU 4780.0113
ILE 4790.0140
LEU 4800.0119
SER 4810.0081
VAL 4820.0091
SER 4830.0107
GLY 4840.0088
GLY 4850.0056
VAL 4860.0064
TYR 4870.0108
PHE 4880.0073
PHE 4890.0078
PHE 4900.0135
ARG 4910.0125
GLY 4920.0111
ILE 4930.0164
GLN 4940.0167
TYR 4950.0111
PHE 4960.0146
LEU 4970.0215
GLN 4980.0138
ARG 4990.0156
ARG 5000.0288
PRO 5010.0249
SER 5020.0209
LEU 5030.0121
LYS 5040.0160
SER 5050.0102
LEU 5060.0087
PHE 5070.0079
VAL 5080.0072
ASP 5090.0052
SER 5100.0057
TYR 5110.0059
SER 5120.0072
GLU 5130.0050
ILE 5140.0039
LEU 5150.0053
PHE 5160.0053
PHE 5170.0055
VAL 5180.0040
GLN 5190.0029
SER 5200.0054
LEU 5210.0038
PHE 5220.0038
MET 5230.0074
LEU 5240.0075
VAL 5250.0078
SER 5260.0109
VAL 5270.0115
VAL 5280.0124
LEU 5290.0139
TYR 5300.0130
PHE 5310.0128
SER 5320.0158
GLN 5330.0155
ARG 5340.0176
LYS 5350.0146
GLU 5360.0155
TYR 5370.0133
VAL 5380.0111
ALA 5390.0094
SER 5400.0077
MET 5410.0057
VAL 5420.0053
PHE 5430.0037
SER 5440.0017
LEU 5450.0011
ALA 5460.0036
MET 5470.0037
GLY 5480.0057
TRP 5490.0080
THR 5500.0104
ASN 5510.0083
MET 5520.0111
LEU 5530.0137
TYR 5540.0124
TYR 5550.0137
THR 5560.0188
ARG 5570.0161
GLY 5580.0184
PHE 5590.0232
GLN 5600.0227
GLN 5610.0273
MET 5620.0269
GLY 5630.0209
ILE 5640.0172
TYR 5650.0195
ALA 5660.0166
VAL 5670.0120
MET 5680.0077
ILE 5690.0094
GLU 5700.0082
LYS 5710.0051
MET 5720.0045
ILE 5730.0049
LEU 5740.0084
ARG 5750.0100
ASP 5760.0136
LEU 5770.0151
CYS 5780.0165
ARG 5790.0167
PHE 5800.0127
MET 5810.0201
PHE 5820.0214
VAL 5830.0131
TYR 5840.0100
LEU 5850.0178
VAL 5860.0189
PHE 5870.0130
LEU 5880.0090
PHE 5890.0112
GLY 5900.0128
PHE 5910.0091
SER 5920.0048
THR 5930.0043
ALA 5940.0037
VAL 5950.0031
VAL 5960.0082
THR 5970.0096
LEU 5980.0125
ILE 5990.0099
GLU 6000.0141
ASP 6010.0178
SER 6260.0189
TYR 6270.0148
ASN 6280.0155
SER 6290.0120
LEU 6300.0072
TYR 6310.0106
SER 6320.0090
THR 6330.0062
CYS 6340.0060
LEU 6350.0034
GLU 6360.0040
LEU 6370.0036
PHE 6380.0026
LYS 6390.0056
PHE 6400.0070
THR 6410.0106
ILE 6420.0177
GLY 6430.0206
MET 6440.0109
GLY 6450.0058
ASP 6460.0072
LEU 6470.0090
GLU 6480.0108
PHE 6490.0105
THR 6500.0134
GLU 6510.0144
ASN 6520.0076
TYR 6530.0079
ASP 6540.0191
PHE 6550.0256
LYS 6560.0199
ALA 6570.0212
VAL 6580.0169
PHE 6590.0074
ILE 6600.0067
ILE 6610.0057
LEU 6620.0069
LEU 6630.0071
LEU 6640.0085
ALA 6650.0157
TYR 6660.0106
VAL 6670.0110
ILE 6680.0198
LEU 6690.0160
THR 6700.0079
TYR 6710.0124
ILE 6720.0172
LEU 6730.0146
LEU 6740.0112
LEU 6750.0108
ASN 6760.0114
MET 6770.0210
LEU 6780.0217
ILE 6790.0207
ALA 6800.0307
LEU 6810.0315
MET 6820.0302
GLY 6830.0371
GLU 6840.0278
THR 6850.0211
VAL 6860.0274
ASN 6870.0411
LYS 6880.0341
ILE 6890.0196
ALA 6900.0169
GLN 6910.0251
GLU 6920.0207
SER 6930.0160
LYS 6940.0180
ASN 6950.0187
ILE 6960.0185
TRP 6970.0182
LYS 6980.0163
LEU 6990.0169
GLN 7000.0163
ARG 7010.0164
ALA 7020.0155
ILE 7030.0153
THR 7040.0158
ILE 7050.0151
LEU 7060.0144
ASP 7070.0179
THR 7080.0164
GLU 7090.0148
LYS 7100.0113
SER 7110.0111
PHE 7120.0117
LEU 7130.0309
LYS 7140.0354
CYS 7150.0428
MET 7160.0191
ARG 7170.0141
LYS 7180.0117
ALA 7190.0130
PHE 7200.0133
ARG 7210.0133
SER 7220.0132
GLY 7230.0159
LYS 7240.0437
LEU 7250.0460
LEU 7260.0490
TYR 7380.0312
ARG 7390.0235
TRP 7400.0163
CYS 7410.0111
PHE 7420.0077
ARG 7430.0067
VAL 7440.0074
ASP 7450.0100
GLU 7460.0102

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.