CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200937413814354

---  normal mode 80  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0434
VAL 2830.0114
GLY 2840.0079
ASN 2850.0086
THR 2860.0072
VAL 2870.0063
LEU 2880.0081
HIS 2890.0049
ALA 2900.0061
LEU 2910.0102
VAL 2920.0126
GLU 2930.0122
VAL 2940.0120
ALA 2950.0185
ASP 2960.0207
ASN 2970.0132
THR 2980.0222
VAL 2990.0155
ASP 3000.0181
ASN 3010.0162
THR 3020.0116
LYS 3030.0072
PHE 3040.0091
VAL 3050.0122
THR 3060.0115
SER 3070.0097
MET 3080.0091
TYR 3090.0097
ASN 3100.0118
GLU 3110.0104
ILE 3120.0113
LEU 3130.0127
ILE 3140.0147
LEU 3150.0129
GLY 3160.0114
ALA 3170.0079
LYS 3180.0141
LEU 3190.0131
HIS 3200.0113
PRO 3210.0148
THR 3220.0192
LEU 3230.0164
LYS 3240.0161
LEU 3250.0100
GLU 3260.0084
GLU 3270.0093
ILE 3280.0096
THR 3290.0083
ASN 3300.0084
ARG 3310.0118
LYS 3320.0115
GLY 3330.0154
LEU 3340.0061
THR 3350.0046
PRO 3360.0031
LEU 3370.0075
ALA 3380.0075
LEU 3390.0072
ALA 3400.0120
ALA 3410.0113
SER 3420.0100
SER 3430.0135
GLY 3440.0121
LYS 3450.0143
ILE 3460.0119
GLY 3470.0100
VAL 3480.0104
LEU 3490.0091
ALA 3500.0069
TYR 3510.0057
ILE 3520.0072
LEU 3530.0070
GLN 3540.0106
ARG 3550.0113
GLU 3560.0167
ILE 3570.0213
HIS 3580.0101
GLU 3590.0182
PRO 3600.0149
GLU 3610.0073
CYS 3620.0164
ARG 3630.0175
HIS 3640.0170
LEU 3650.0175
SER 3660.0191
ARG 3670.0106
LYS 3680.0117
PHE 3690.0158
THR 3700.0168
GLU 3710.0174
TRP 3720.0135
ALA 3730.0165
TYR 3740.0159
GLY 3750.0165
PRO 3760.0173
VAL 3770.0108
HIS 3780.0109
SER 3790.0091
SER 3800.0114
LEU 3810.0117
TYR 3820.0072
ASP 3830.0068
LEU 3840.0026
SER 3850.0028
CYS 3860.0030
ILE 3870.0049
ASP 3880.0079
THR 3890.0050
CYS 3900.0025
GLU 3910.0099
LYS 3920.0112
ASN 3930.0075
SER 3940.0044
VAL 3950.0068
LEU 3960.0057
GLU 3970.0045
VAL 3980.0069
ILE 3990.0068
ALA 4000.0015
TYR 4010.0057
SER 4020.0082
SER 4030.0104
SER 4040.0095
GLU 4050.0142
THR 4060.0101
PRO 4070.0119
ASN 4080.0102
ARG 4090.0067
HIS 4100.0074
ASP 4110.0085
MET 4120.0084
LEU 4130.0099
LEU 4140.0124
VAL 4150.0108
GLU 4160.0124
PRO 4170.0095
LEU 4180.0074
ASN 4190.0098
ARG 4200.0106
LEU 4210.0064
LEU 4220.0064
GLN 4230.0076
ASP 4240.0055
LYS 4250.0052
TRP 4260.0053
ASP 4270.0070
ARG 4280.0075
PHE 4290.0058
VAL 4300.0043
LYS 4310.0096
ARG 4320.0104
ILE 4330.0116
PHE 4340.0120
TYR 4350.0124
PHE 4360.0162
ASN 4370.0141
PHE 4380.0097
PHE 4390.0143
VAL 4400.0106
TYR 4410.0065
CYS 4420.0113
LEU 4430.0151
TYR 4440.0126
MET 4450.0139
ILE 4460.0193
ILE 4470.0197
PHE 4480.0203
THR 4490.0211
ALA 4500.0236
ALA 4510.0186
ALA 4520.0283
TYR 4530.0298
TYR 4540.0123
ARG 4550.0110
PRO 4560.0183
VAL 4570.0434
GLU 4580.0146
GLY 4590.0232
LEU 4600.0372
PRO 4610.0145
PRO 4620.0164
TYR 4630.0101
LYS 4640.0110
LEU 4650.0128
LYS 4660.0170
ASN 4670.0132
THR 4680.0050
VAL 4690.0148
GLY 4700.0139
ASP 4710.0097
TYR 4720.0066
PHE 4730.0023
ARG 4740.0100
VAL 4750.0144
THR 4760.0082
GLY 4770.0117
GLU 4780.0124
ILE 4790.0114
LEU 4800.0104
SER 4810.0094
VAL 4820.0109
SER 4830.0075
GLY 4840.0080
GLY 4850.0080
VAL 4860.0090
TYR 4870.0125
PHE 4880.0109
PHE 4890.0113
PHE 4900.0121
ARG 4910.0118
GLY 4920.0120
ILE 4930.0131
GLN 4940.0158
TYR 4950.0153
PHE 4960.0137
LEU 4970.0187
GLN 4980.0222
ARG 4990.0197
ARG 5000.0206
PRO 5010.0131
SER 5020.0219
LEU 5030.0123
LYS 5040.0138
SER 5050.0105
LEU 5060.0114
PHE 5070.0112
VAL 5080.0083
ASP 5090.0068
SER 5100.0073
TYR 5110.0057
SER 5120.0062
GLU 5130.0069
ILE 5140.0078
LEU 5150.0069
PHE 5160.0070
PHE 5170.0125
VAL 5180.0128
GLN 5190.0125
SER 5200.0125
LEU 5210.0107
PHE 5220.0111
MET 5230.0072
LEU 5240.0059
VAL 5250.0050
SER 5260.0187
VAL 5270.0290
VAL 5280.0355
LEU 5290.0299
TYR 5300.0227
PHE 5310.0237
SER 5320.0283
GLN 5330.0208
ARG 5340.0391
LYS 5350.0223
GLU 5360.0307
TYR 5370.0265
VAL 5380.0178
ALA 5390.0088
SER 5400.0085
MET 5410.0147
VAL 5420.0167
PHE 5430.0170
SER 5440.0171
LEU 5450.0158
ALA 5460.0147
MET 5470.0135
GLY 5480.0129
TRP 5490.0096
THR 5500.0066
ASN 5510.0031
MET 5520.0036
LEU 5530.0068
TYR 5540.0088
TYR 5550.0082
THR 5560.0090
ARG 5570.0082
GLY 5580.0071
PHE 5590.0086
GLN 5600.0109
GLN 5610.0244
MET 5620.0202
GLY 5630.0125
ILE 5640.0132
TYR 5650.0169
ALA 5660.0176
VAL 5670.0153
MET 5680.0127
ILE 5690.0128
GLU 5700.0129
LYS 5710.0103
MET 5720.0123
ILE 5730.0100
LEU 5740.0071
ARG 5750.0079
ASP 5760.0143
LEU 5770.0140
CYS 5780.0207
ARG 5790.0298
PHE 5800.0286
MET 5810.0054
PHE 5820.0342
VAL 5830.0170
TYR 5840.0088
LEU 5850.0102
VAL 5860.0078
PHE 5870.0114
LEU 5880.0115
PHE 5890.0164
GLY 5900.0136
PHE 5910.0088
SER 5920.0068
THR 5930.0089
ALA 5940.0087
VAL 5950.0088
VAL 5960.0106
THR 5970.0138
LEU 5980.0158
ILE 5990.0149
GLU 6000.0144
ASP 6010.0215
SER 6260.0153
TYR 6270.0149
ASN 6280.0176
SER 6290.0293
LEU 6300.0083
TYR 6310.0421
SER 6320.0235
THR 6330.0116
CYS 6340.0103
LEU 6350.0053
GLU 6360.0088
LEU 6370.0068
PHE 6380.0102
LYS 6390.0139
PHE 6400.0170
THR 6410.0213
ILE 6420.0319
GLY 6430.0372
MET 6440.0223
GLY 6450.0217
ASP 6460.0234
LEU 6470.0121
GLU 6480.0090
PHE 6490.0114
THR 6500.0126
GLU 6510.0114
ASN 6520.0069
TYR 6530.0171
ASP 6540.0283
PHE 6550.0330
LYS 6560.0221
ALA 6570.0264
VAL 6580.0256
PHE 6590.0146
ILE 6600.0158
ILE 6610.0206
LEU 6620.0082
LEU 6630.0087
LEU 6640.0123
ALA 6650.0122
TYR 6660.0126
VAL 6670.0108
ILE 6680.0198
LEU 6690.0228
THR 6700.0184
TYR 6710.0152
ILE 6720.0230
LEU 6730.0290
LEU 6740.0229
LEU 6750.0136
ASN 6760.0170
MET 6770.0391
LEU 6780.0236
ILE 6790.0142
ALA 6800.0161
LEU 6810.0097
MET 6820.0047
GLY 6830.0074
GLU 6840.0013
THR 6850.0072
VAL 6860.0167
ASN 6870.0128
LYS 6880.0075
ILE 6890.0144
ALA 6900.0131
GLN 6910.0108
GLU 6920.0115
SER 6930.0111
LYS 6940.0062
ASN 6950.0086
ILE 6960.0107
TRP 6970.0064
LYS 6980.0074
LEU 6990.0085
GLN 7000.0092
ARG 7010.0079
ALA 7020.0071
ILE 7030.0076
THR 7040.0092
ILE 7050.0056
LEU 7060.0056
ASP 7070.0111
THR 7080.0042
GLU 7090.0072
LYS 7100.0119
SER 7110.0087
PHE 7120.0095
LEU 7130.0076
LYS 7140.0110
CYS 7150.0080
MET 7160.0094
ARG 7170.0222
LYS 7180.0284
ALA 7190.0190
PHE 7200.0155
ARG 7210.0098
SER 7220.0054
GLY 7230.0061
LYS 7240.0076
LEU 7250.0062
LEU 7260.0212
TYR 7380.0106
ARG 7390.0105
TRP 7400.0067
CYS 7410.0041
PHE 7420.0022
ARG 7430.0047
VAL 7440.0097
ASP 7450.0076
GLU 7460.0132

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.