CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200937413814354

---  normal mode 89  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0473
VAL 2830.0462
GLY 2840.0186
ASN 2850.0246
THR 2860.0239
VAL 2870.0173
LEU 2880.0164
HIS 2890.0117
ALA 2900.0084
LEU 2910.0068
VAL 2920.0031
GLU 2930.0078
VAL 2940.0164
ALA 2950.0196
ASP 2960.0204
ASN 2970.0169
THR 2980.0381
VAL 2990.0270
ASP 3000.0180
ASN 3010.0160
THR 3020.0077
LYS 3030.0248
PHE 3040.0229
VAL 3050.0175
THR 3060.0104
SER 3070.0101
MET 3080.0125
TYR 3090.0118
ASN 3100.0261
GLU 3110.0297
ILE 3120.0223
LEU 3130.0204
ILE 3140.0321
LEU 3150.0291
GLY 3160.0259
ALA 3170.0121
LYS 3180.0068
LEU 3190.0445
HIS 3200.0194
PRO 3210.0240
THR 3220.0374
LEU 3230.0335
LYS 3240.0271
LEU 3250.0221
GLU 3260.0266
GLU 3270.0344
ILE 3280.0274
THR 3290.0209
ASN 3300.0174
ARG 3310.0167
LYS 3320.0228
GLY 3330.0195
LEU 3340.0193
THR 3350.0208
PRO 3360.0228
LEU 3370.0183
ALA 3380.0181
LEU 3390.0150
ALA 3400.0083
ALA 3410.0108
SER 3420.0099
SER 3430.0075
GLY 3440.0083
LYS 3450.0089
ILE 3460.0072
GLY 3470.0062
VAL 3480.0072
LEU 3490.0109
ALA 3500.0119
TYR 3510.0073
ILE 3520.0098
LEU 3530.0134
GLN 3540.0122
ARG 3550.0082
GLU 3560.0088
ILE 3570.0155
HIS 3580.0208
GLU 3590.0091
PRO 3600.0330
GLU 3610.0105
CYS 3620.0143
ARG 3630.0165
HIS 3640.0191
LEU 3650.0209
SER 3660.0146
ARG 3670.0035
LYS 3680.0038
PHE 3690.0013
THR 3700.0240
GLU 3710.0277
TRP 3720.0226
ALA 3730.0257
TYR 3740.0276
GLY 3750.0195
PRO 3760.0178
VAL 3770.0159
HIS 3780.0189
SER 3790.0107
SER 3800.0119
LEU 3810.0144
TYR 3820.0108
ASP 3830.0100
LEU 3840.0082
SER 3850.0165
CYS 3860.0205
ILE 3870.0219
ASP 3880.0230
THR 3890.0165
CYS 3900.0203
GLU 3910.0439
LYS 3920.0372
ASN 3930.0427
SER 3940.0308
VAL 3950.0299
LEU 3960.0259
GLU 3970.0238
VAL 3980.0223
ILE 3990.0176
ALA 4000.0092
TYR 4010.0173
SER 4020.0097
SER 4030.0221
SER 4040.0373
GLU 4050.0446
THR 4060.0164
PRO 4070.0193
ASN 4080.0139
ARG 4090.0060
HIS 4100.0073
ASP 4110.0139
MET 4120.0150
LEU 4130.0177
LEU 4140.0224
VAL 4150.0261
GLU 4160.0234
PRO 4170.0228
LEU 4180.0221
ASN 4190.0191
ARG 4200.0172
LEU 4210.0134
LEU 4220.0089
GLN 4230.0088
ASP 4240.0092
LYS 4250.0090
TRP 4260.0043
ASP 4270.0087
ARG 4280.0126
PHE 4290.0111
VAL 4300.0079
LYS 4310.0129
ARG 4320.0164
ILE 4330.0052
PHE 4340.0053
TYR 4350.0084
PHE 4360.0063
ASN 4370.0045
PHE 4380.0051
PHE 4390.0070
VAL 4400.0066
TYR 4410.0092
CYS 4420.0093
LEU 4430.0061
TYR 4440.0041
MET 4450.0085
ILE 4460.0122
ILE 4470.0106
PHE 4480.0078
THR 4490.0095
ALA 4500.0119
ALA 4510.0074
ALA 4520.0085
TYR 4530.0079
TYR 4540.0017
ARG 4550.0038
PRO 4560.0019
VAL 4570.0169
GLU 4580.0152
GLY 4590.0195
LEU 4600.0212
PRO 4610.0116
PRO 4620.0071
TYR 4630.0049
LYS 4640.0030
LEU 4650.0042
LYS 4660.0150
ASN 4670.0155
THR 4680.0155
VAL 4690.0134
GLY 4700.0141
ASP 4710.0106
TYR 4720.0102
PHE 4730.0109
ARG 4740.0080
VAL 4750.0068
THR 4760.0041
GLY 4770.0076
GLU 4780.0074
ILE 4790.0096
LEU 4800.0114
SER 4810.0074
VAL 4820.0094
SER 4830.0111
GLY 4840.0085
GLY 4850.0121
VAL 4860.0173
TYR 4870.0179
PHE 4880.0152
PHE 4890.0177
PHE 4900.0150
ARG 4910.0169
GLY 4920.0169
ILE 4930.0107
GLN 4940.0142
TYR 4950.0143
PHE 4960.0072
LEU 4970.0147
GLN 4980.0239
ARG 4990.0176
ARG 5000.0100
PRO 5010.0041
SER 5020.0266
LEU 5030.0197
LYS 5040.0160
SER 5050.0227
LEU 5060.0226
PHE 5070.0248
VAL 5080.0195
ASP 5090.0166
SER 5100.0159
TYR 5110.0074
SER 5120.0066
GLU 5130.0073
ILE 5140.0101
LEU 5150.0100
PHE 5160.0134
PHE 5170.0129
VAL 5180.0114
GLN 5190.0086
SER 5200.0081
LEU 5210.0121
PHE 5220.0071
MET 5230.0068
LEU 5240.0119
VAL 5250.0106
SER 5260.0107
VAL 5270.0101
VAL 5280.0080
LEU 5290.0068
TYR 5300.0043
PHE 5310.0028
SER 5320.0100
GLN 5330.0082
ARG 5340.0062
LYS 5350.0089
GLU 5360.0114
TYR 5370.0098
VAL 5380.0078
ALA 5390.0076
SER 5400.0070
MET 5410.0047
VAL 5420.0063
PHE 5430.0071
SER 5440.0066
LEU 5450.0087
ALA 5460.0145
MET 5470.0142
GLY 5480.0120
TRP 5490.0163
THR 5500.0164
ASN 5510.0154
MET 5520.0135
LEU 5530.0069
TYR 5540.0046
TYR 5550.0053
THR 5560.0093
ARG 5570.0105
GLY 5580.0129
PHE 5590.0123
GLN 5600.0133
GLN 5610.0123
MET 5620.0112
GLY 5630.0112
ILE 5640.0129
TYR 5650.0195
ALA 5660.0081
VAL 5670.0102
MET 5680.0099
ILE 5690.0060
GLU 5700.0027
LYS 5710.0043
MET 5720.0036
ILE 5730.0019
LEU 5740.0049
ARG 5750.0036
ASP 5760.0018
LEU 5770.0055
CYS 5780.0051
ARG 5790.0019
PHE 5800.0013
MET 5810.0015
PHE 5820.0016
VAL 5830.0017
TYR 5840.0025
LEU 5850.0024
VAL 5860.0030
PHE 5870.0035
LEU 5880.0036
PHE 5890.0033
GLY 5900.0041
PHE 5910.0038
SER 5920.0025
THR 5930.0035
ALA 5940.0034
VAL 5950.0012
VAL 5960.0031
THR 5970.0041
LEU 5980.0044
ILE 5990.0035
GLU 6000.0045
ASP 6010.0117
SER 6260.0047
TYR 6270.0053
ASN 6280.0066
SER 6290.0097
LEU 6300.0072
TYR 6310.0080
SER 6320.0051
THR 6330.0016
CYS 6340.0011
LEU 6350.0027
GLU 6360.0032
LEU 6370.0035
PHE 6380.0044
LYS 6390.0044
PHE 6400.0032
THR 6410.0043
ILE 6420.0072
GLY 6430.0077
MET 6440.0078
GLY 6450.0028
ASP 6460.0022
LEU 6470.0019
GLU 6480.0022
PHE 6490.0019
THR 6500.0022
GLU 6510.0030
ASN 6520.0035
TYR 6530.0040
ASP 6540.0034
PHE 6550.0049
LYS 6560.0066
ALA 6570.0098
VAL 6580.0088
PHE 6590.0039
ILE 6600.0034
ILE 6610.0038
LEU 6620.0025
LEU 6630.0022
LEU 6640.0027
ALA 6650.0049
TYR 6660.0046
VAL 6670.0046
ILE 6680.0043
LEU 6690.0031
THR 6700.0027
TYR 6710.0046
ILE 6720.0048
LEU 6730.0032
LEU 6740.0030
LEU 6750.0045
ASN 6760.0077
MET 6770.0083
LEU 6780.0035
ILE 6790.0036
ALA 6800.0026
LEU 6810.0033
MET 6820.0044
GLY 6830.0165
GLU 6840.0123
THR 6850.0064
VAL 6860.0116
ASN 6870.0113
LYS 6880.0131
ILE 6890.0110
ALA 6900.0111
GLN 6910.0148
GLU 6920.0038
SER 6930.0046
LYS 6940.0100
ASN 6950.0082
ILE 6960.0089
TRP 6970.0127
LYS 6980.0092
LEU 6990.0093
GLN 7000.0130
ARG 7010.0115
ALA 7020.0098
ILE 7030.0166
THR 7040.0180
ILE 7050.0133
LEU 7060.0219
ASP 7070.0267
THR 7080.0225
GLU 7090.0257
LYS 7100.0313
SER 7110.0247
PHE 7120.0209
LEU 7130.0130
LYS 7140.0221
CYS 7150.0437
MET 7160.0337
ARG 7170.0380
LYS 7180.0473
ALA 7190.0110
PHE 7200.0119
ARG 7210.0168
SER 7220.0021
GLY 7230.0049
LYS 7240.0084
LEU 7250.0158
LEU 7260.0051
TYR 7380.0054
ARG 7390.0065
TRP 7400.0056
CYS 7410.0087
PHE 7420.0083
ARG 7430.0075
VAL 7440.0099
ASP 7450.0083
GLU 7460.0145

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.