CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 17-DEC-20 7L2L  ***

<R2> analysis for 2602200937553814523

---  normal mode 77  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0439
VAL 2830.0228
GLY 2840.0199
ASN 2850.0109
THR 2860.0126
VAL 2870.0144
LEU 2880.0172
HIS 2890.0142
ALA 2900.0147
LEU 2910.0194
VAL 2920.0210
GLU 2930.0198
VAL 2940.0221
ALA 2950.0226
ASP 2960.0220
ASN 2970.0122
THR 2980.0191
VAL 2990.0146
ASP 3000.0103
ASN 3010.0101
THR 3020.0083
LYS 3030.0102
PHE 3040.0093
VAL 3050.0122
THR 3060.0125
SER 3070.0091
MET 3080.0091
TYR 3090.0089
ASN 3100.0053
GLU 3110.0024
ILE 3120.0021
LEU 3130.0082
ILE 3140.0094
LEU 3150.0108
GLY 3160.0143
ALA 3170.0151
LYS 3180.0095
LEU 3190.0034
HIS 3200.0082
PRO 3210.0106
THR 3220.0120
LEU 3230.0165
LYS 3240.0195
LEU 3250.0155
GLU 3260.0185
GLU 3270.0205
ILE 3280.0227
THR 3290.0168
ASN 3300.0122
ARG 3310.0173
LYS 3320.0142
GLY 3330.0152
LEU 3340.0076
THR 3350.0116
PRO 3360.0131
LEU 3370.0118
ALA 3380.0129
LEU 3390.0118
ALA 3400.0183
ALA 3410.0186
SER 3420.0184
SER 3430.0223
GLY 3440.0195
LYS 3450.0199
ILE 3460.0149
GLY 3470.0108
VAL 3480.0119
LEU 3490.0132
ALA 3500.0123
TYR 3510.0137
ILE 3520.0167
LEU 3530.0175
GLN 3540.0210
ARG 3550.0209
GLU 3560.0240
ILE 3570.0249
HIS 3580.0230
GLU 3590.0179
PRO 3600.0341
GLU 3610.0221
CYS 3620.0234
ARG 3630.0263
HIS 3640.0267
LEU 3650.0266
SER 3660.0287
ARG 3670.0218
LYS 3680.0203
PHE 3690.0215
THR 3700.0202
GLU 3710.0248
TRP 3720.0242
ALA 3730.0317
TYR 3740.0352
GLY 3750.0334
PRO 3760.0419
VAL 3770.0250
HIS 3780.0228
SER 3790.0158
SER 3800.0131
LEU 3810.0145
TYR 3820.0133
ASP 3830.0184
LEU 3840.0162
SER 3850.0177
CYS 3860.0113
ILE 3870.0084
ASP 3880.0079
THR 3890.0131
CYS 3900.0137
GLU 3910.0096
LYS 3920.0104
ASN 3930.0095
SER 3940.0078
VAL 3950.0094
LEU 3960.0095
GLU 3970.0093
VAL 3980.0116
ILE 3990.0137
ALA 4000.0092
TYR 4010.0075
SER 4020.0107
SER 4030.0166
SER 4040.0091
GLU 4050.0249
THR 4060.0223
PRO 4070.0222
ASN 4080.0211
ARG 4090.0182
HIS 4100.0142
ASP 4110.0157
MET 4120.0191
LEU 4130.0177
LEU 4140.0186
VAL 4150.0225
GLU 4160.0221
PRO 4170.0175
LEU 4180.0162
ASN 4190.0175
ARG 4200.0182
LEU 4210.0079
LEU 4220.0096
GLN 4230.0127
ASP 4240.0110
LYS 4250.0056
TRP 4260.0050
ASP 4270.0108
ARG 4280.0084
PHE 4290.0055
VAL 4300.0056
LYS 4310.0053
ARG 4320.0106
ILE 4330.0101
PHE 4340.0052
TYR 4350.0120
PHE 4360.0210
ASN 4370.0099
PHE 4380.0102
PHE 4390.0225
VAL 4400.0171
TYR 4410.0046
CYS 4420.0090
LEU 4430.0057
TYR 4440.0075
MET 4450.0108
ILE 4460.0110
ILE 4470.0113
PHE 4480.0089
THR 4490.0092
ALA 4500.0065
ALA 4510.0019
ALA 4520.0012
TYR 4530.0107
TYR 4540.0091
ARG 4550.0110
PRO 4560.0143
VAL 4570.0166
GLU 4580.0159
GLY 4590.0154
LEU 4600.0173
PRO 4610.0083
PRO 4620.0094
TYR 4630.0037
LYS 4640.0064
LEU 4650.0024
LYS 4660.0040
ASN 4670.0071
THR 4680.0069
VAL 4690.0108
GLY 4700.0075
ASP 4710.0040
TYR 4720.0063
PHE 4730.0105
ARG 4740.0074
VAL 4750.0120
THR 4760.0160
GLY 4770.0099
GLU 4780.0073
ILE 4790.0175
LEU 4800.0190
SER 4810.0103
VAL 4820.0100
SER 4830.0180
GLY 4840.0168
GLY 4850.0153
VAL 4860.0170
TYR 4870.0159
PHE 4880.0157
PHE 4890.0169
PHE 4900.0122
ARG 4910.0128
GLY 4920.0150
ILE 4930.0103
GLN 4940.0121
TYR 4950.0134
PHE 4960.0106
LEU 4970.0156
GLN 4980.0197
ARG 4990.0162
ARG 5000.0147
PRO 5010.0091
SER 5020.0164
LEU 5030.0050
LYS 5040.0154
SER 5050.0079
LEU 5060.0086
PHE 5070.0108
VAL 5080.0076
ASP 5090.0058
SER 5100.0107
TYR 5110.0165
SER 5120.0161
GLU 5130.0166
ILE 5140.0164
LEU 5150.0157
PHE 5160.0153
PHE 5170.0157
VAL 5180.0152
GLN 5190.0116
SER 5200.0097
LEU 5210.0120
PHE 5220.0067
MET 5230.0061
LEU 5240.0067
VAL 5250.0089
SER 5260.0144
VAL 5270.0153
VAL 5280.0157
LEU 5290.0185
TYR 5300.0150
PHE 5310.0202
SER 5320.0273
GLN 5330.0195
ARG 5340.0166
LYS 5350.0053
GLU 5360.0121
TYR 5370.0163
VAL 5380.0141
ALA 5390.0161
SER 5400.0134
MET 5410.0086
VAL 5420.0099
PHE 5430.0065
SER 5440.0062
LEU 5450.0072
ALA 5460.0080
MET 5470.0108
GLY 5480.0109
TRP 5490.0119
THR 5500.0158
ASN 5510.0157
MET 5520.0155
LEU 5530.0180
TYR 5540.0168
TYR 5550.0160
THR 5560.0121
ARG 5570.0118
GLY 5580.0124
PHE 5590.0126
GLN 5600.0176
GLN 5610.0221
MET 5620.0180
GLY 5630.0125
ILE 5640.0160
TYR 5650.0189
ALA 5660.0076
VAL 5670.0057
MET 5680.0032
ILE 5690.0092
GLU 5700.0112
LYS 5710.0103
MET 5720.0104
ILE 5730.0146
LEU 5740.0150
ARG 5750.0146
ASP 5760.0145
LEU 5770.0151
CYS 5780.0205
ARG 5790.0199
PHE 5800.0133
MET 5810.0169
PHE 5820.0237
VAL 5830.0170
TYR 5840.0130
LEU 5850.0109
VAL 5860.0130
PHE 5870.0116
LEU 5880.0092
PHE 5890.0094
GLY 5900.0069
PHE 5910.0059
SER 5920.0047
THR 5930.0045
ALA 5940.0031
VAL 5950.0014
VAL 5960.0014
THR 5970.0030
LEU 5980.0052
ILE 5990.0063
GLU 6000.0082
ASP 6010.0179
SER 6260.0205
TYR 6270.0137
ASN 6280.0143
SER 6290.0196
LEU 6300.0105
TYR 6310.0232
SER 6320.0142
THR 6330.0083
CYS 6340.0064
LEU 6350.0060
GLU 6360.0059
LEU 6370.0061
PHE 6380.0149
LYS 6390.0162
PHE 6400.0126
THR 6410.0174
ILE 6420.0275
GLY 6430.0250
MET 6440.0243
GLY 6450.0152
ASP 6460.0166
LEU 6470.0046
GLU 6480.0044
PHE 6490.0026
THR 6500.0107
GLU 6510.0111
ASN 6520.0094
TYR 6530.0132
ASP 6540.0164
PHE 6550.0167
LYS 6560.0255
ALA 6570.0248
VAL 6580.0138
PHE 6590.0107
ILE 6600.0149
ILE 6610.0168
LEU 6620.0080
LEU 6630.0046
LEU 6640.0079
ALA 6650.0087
TYR 6660.0078
VAL 6670.0070
ILE 6680.0075
LEU 6690.0118
THR 6700.0132
TYR 6710.0083
ILE 6720.0084
LEU 6730.0136
LEU 6740.0153
LEU 6750.0082
ASN 6760.0121
MET 6770.0236
LEU 6780.0103
ILE 6790.0181
ALA 6800.0165
LEU 6810.0083
MET 6820.0122
GLY 6830.0127
GLU 6840.0079
THR 6850.0146
VAL 6860.0116
ASN 6870.0128
LYS 6880.0188
ILE 6890.0123
ALA 6900.0134
GLN 6910.0121
GLU 6920.0109
SER 6930.0106
LYS 6940.0153
ASN 6950.0094
ILE 6960.0083
TRP 6970.0104
LYS 6980.0076
LEU 6990.0083
GLN 7000.0072
ARG 7010.0048
ALA 7020.0051
ILE 7030.0027
THR 7040.0018
ILE 7050.0028
LEU 7060.0036
ASP 7070.0061
THR 7080.0035
GLU 7090.0058
LYS 7100.0126
SER 7110.0120
PHE 7120.0137
LEU 7130.0177
LYS 7140.0225
CYS 7150.0204
MET 7160.0203
ARG 7170.0183
LYS 7180.0271
ALA 7190.0151
PHE 7200.0143
ARG 7210.0102
SER 7220.0191
GLY 7230.0163
LYS 7240.0179
LEU 7250.0401
LEU 7260.0439
TYR 7380.0293
ARG 7390.0257
TRP 7400.0212
CYS 7410.0197
PHE 7420.0086
ARG 7430.0045
VAL 7440.0187
ASP 7450.0249
GLU 7460.0348

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.