CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MEMBRANE PROTEIN 08-AUG-00 1FJK  ***

CA strain for 2602202202429630

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 1ASP 2 -0.0029
ASP 2LYS 3 -0.0025
LYS 3VAL 4 0.0069
VAL 4GLN 5 0.0117
GLN 5TYR 6 -0.0017
TYR 6LEU 7 0.0101
LEU 7THR 8 0.0345
THR 8ARG 9 0.0186
ARG 9SER 10 0.0036
SER 10ALA 11 0.0265
ALA 11ILE 12 0.0159
ILE 12ARG 13 -0.0009
ARG 13ARG 14 0.0425
ARG 14ALA 15 0.0770
ALA 15SER 16 0.0818
SER 16THR 17 0.0509
THR 17ILE 18 0.0471
ILE 18GLU 19 0.0419
GLU 19MET 20 0.0571
MET 20PRO 21 0.0387
PRO 21GLN 22 -0.0046
GLN 22GLN 23 -0.0133
GLN 23ALA 24 -0.0596
ALA 24ARG 25 0.1167
ARG 25GLN 26 -0.0154
GLN 26ASN 27 -0.0486
ASN 27LEU 28 0.0312
LEU 28GLN 29 0.0182
GLN 29ASN 30 -0.0288
ASN 30LEU 31 0.0273
LEU 31PHE 32 -0.0457
PHE 32ILE 33 -0.0433
ILE 33ASN 34 0.0310
ASN 34PHE 35 0.0079
PHE 35CYS 36 -0.0288
CYS 36LEU 37 0.0083
LEU 37ILE 38 0.0284
ILE 38LEU 39 -0.0179
LEU 39ILE 40 -0.0252
ILE 40PHE 41 0.0087
PHE 41LEU 42 0.0452
LEU 42LEU 43 -0.0799
LEU 43LEU 44 -0.0248
LEU 44ILE 45 0.0446
ILE 45CYS 46 -0.0500
CYS 46ILE 47 -0.0249
ILE 47ILE 48 0.0310
ILE 48VAL 49 0.0088
VAL 49MET 50 -0.0231
MET 50LEU 51 0.0251
LEU 51LEU 52 0.0100

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.