CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  LYASE (OXO-ACID) 04-MAR-94 1CRM  ***

CA distance fluctuations for 260221185340572269

---  normal mode 8  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
VAL 233 0.87 TRP 5 -0.18 GLU 133
SER 231 0.79 GLY 6 -0.22 TYR 7
SER 231 0.66 TYR 7 -0.22 GLY 6
ASN 232 0.77 ASP 8 -0.19 ALA 132
ASP 236 0.78 ASP 9 -0.31 THR 100
ASP 236 0.98 LYS 10 -0.21 THR 100
VAL 233 0.92 ASN 11 -0.17 THR 100
VAL 233 0.69 GLY 12 -0.24 THR 100
VAL 233 0.56 PRO 13 -0.30 HIS 103
ASP 236 0.59 GLU 14 -0.35 HIS 103
ASP 236 0.69 GLN 15 -0.28 HIS 103
VAL 233 0.65 TRP 16 -0.23 HIS 103
VAL 233 0.59 SER 17 -0.23 HIS 103
VAL 233 0.68 LYS 18 -0.21 HIS 103
VAL 233 0.66 LEU 19 -0.18 HIS 103
VAL 233 0.55 TYR 20 -0.16 HIS 103
VAL 233 0.50 PRO 21 -0.16 HIS 103
VAL 233 0.42 ILE 22 -0.13 HIS 103
VAL 233 0.47 ALA 23 -0.16 HIS 103
ASP 236 0.45 ASN 24 -0.17 LYS 113
ASP 236 0.37 GLY 25 -0.11 LYS 113
ASP 236 0.33 ASN 26 -0.10 GLY 111
ASP 236 0.27 ASN 27 -0.09 SER 85
VAL 233 0.31 GLN 28 -0.10 LYS 113
VAL 233 0.27 SER 29 -0.12 SER 17
ASP 236 0.25 PRO 30 -0.13 SER 17
ASP 236 0.27 VAL 31 -0.15 SER 17
ASP 236 0.26 ASP 32 -0.15 SER 17
ASP 236 0.21 ILE 33 -0.16 SER 215
ASP 236 0.21 LYS 34 -0.17 SER 215
ASN 237 0.16 THR 35 -0.21 GLU 214
ASN 237 0.18 SER 36 -0.18 GLU 214
ASP 236 0.20 GLU 37 -0.13 GLU 214
ASP 236 0.17 THR 38 -0.14 SER 182
ASP 236 0.15 LYS 39 -0.13 SER 182
ASN 237 0.11 HIS 40 -0.16 SER 182
ASP 139 0.11 ASP 41 -0.13 SER 182
GLU 102 0.09 THR 42 -0.15 TYR 51
LYS 127 0.10 SER 43 -0.14 TYR 51
LYS 127 0.09 LEU 44 -0.17 VAL 49
SER 187 0.13 LYS 45 -0.18 TYR 51
SER 187 0.18 PRO 46 -0.21 VAL 49
SER 187 0.22 ILE 47 -0.20 VAL 49
SER 187 0.26 SER 48 -0.23 TYR 51
GLU 152 0.17 VAL 49 -0.21 PRO 46
THR 183 0.17 SER 50 -0.23 TYR 51
PRO 202 0.17 TYR 51 -0.25 LEU 189
PRO 202 0.20 ASN 52 -0.23 LEU 189
PRO 202 0.22 PRO 53 -0.26 LEU 189
PRO 202 0.25 ALA 54 -0.22 GLY 235
PRO 202 0.28 THR 55 -0.20 GLY 235
PRO 202 0.31 ALA 56 -0.21 GLY 235
PRO 202 0.37 LYS 57 -0.22 GLY 235
PRO 202 0.39 GLU 58 -0.26 LYS 172
PRO 202 0.37 ILE 59 -0.21 GLY 235
TRP 5 0.47 ILE 60 -0.20 SER 130
TRP 5 0.52 ASN 61 -0.26 SER 130
TRP 5 0.67 VAL 62 -0.31 ALA 132
GLY 6 0.74 GLY 63 -0.35 ALA 132
GLY 6 0.56 HIS 64 -0.32 ALA 132
GLY 6 0.40 SER 65 -0.29 ALA 132
GLY 6 0.34 PHE 66 -0.23 ALA 132
PRO 201 0.38 HIS 67 -0.19 SER 130
PRO 202 0.34 VAL 68 -0.17 LYS 172
PRO 202 0.41 ASN 69 -0.21 LYS 172
PRO 202 0.36 PHE 70 -0.19 LYS 172
PRO 202 0.32 GLU 71 -0.24 LYS 172
PRO 202 0.25 ASP 72 -0.22 LYS 172
PRO 202 0.22 ASN 73 -0.24 LYS 172
SER 130 0.17 GLN 74 -0.21 LYS 172
PRO 202 0.14 ASP 75 -0.18 LYS 172
PRO 202 0.17 ARG 76 -0.17 LYS 172
PRO 202 0.18 SER 77 -0.17 LYS 172
PRO 202 0.13 VAL 78 -0.17 LEU 79
PRO 186 0.16 LEU 79 -0.17 VAL 78
SER 187 0.19 LYS 80 -0.18 GLY 81
SER 187 0.19 GLY 81 -0.18 LYS 80
SER 187 0.15 GLY 82 -0.16 VAL 49
SER 187 0.11 PRO 83 -0.11 VAL 49
SER 187 0.14 PHE 84 -0.08 PRO 195
SER 187 0.16 SER 85 -0.10 PRO 195
SER 187 0.14 ASP 86 -0.11 LYS 172
SER 187 0.15 SER 87 -0.13 LYS 172
SER 187 0.11 TYR 88 -0.13 LYS 172
PRO 202 0.15 ARG 89 -0.16 LYS 172
PRO 202 0.22 LEU 90 -0.16 LYS 172
PRO 202 0.31 PHE 91 -0.16 LYS 172
PRO 202 0.34 GLN 92 -0.15 LYS 172
PRO 202 0.26 PHE 93 -0.11 SER 130
PRO 202 0.24 HIS 94 -0.16 ALA 132
HIS 64 0.15 PHE 95 -0.18 ALA 132
SER 231 0.20 HIS 96 -0.20 ALA 132
SER 231 0.19 TRP 97 -0.20 ALA 132
SER 231 0.22 GLY 98 -0.22 ASP 9
VAL 239 0.22 SER 99 -0.28 ASP 9
VAL 239 0.17 THR 100 -0.31 ASP 9
GLU 214 0.12 ASN 101 -0.25 GLU 14
GLU 214 0.16 GLU 102 -0.32 GLU 14
VAL 239 0.20 HIS 103 -0.35 GLU 14
SER 231 0.22 GLY 104 -0.26 GLU 14
SER 231 0.22 SER 105 -0.19 GLU 14
SER 231 0.25 GLU 106 -0.17 GLU 14
SER 231 0.23 HIS 107 -0.15 SER 17
SER 231 0.23 THR 108 -0.16 SER 17
SER 231 0.19 VAL 109 -0.22 SER 215
ASN 237 0.21 ASP 110 -0.20 SER 215
ASN 237 0.26 GLY 111 -0.19 SER 17
VAL 239 0.22 VAL 112 -0.21 GLU 14
SER 231 0.21 LYS 113 -0.28 GLU 14
SER 231 0.18 TYR 114 -0.22 GLU 14
SER 231 0.15 SER 115 -0.24 GLU 14
SER 231 0.15 ALA 116 -0.16 GLU 14
HIS 64 0.14 GLU 117 -0.13 ALA 132
HIS 64 0.12 LEU 118 -0.11 ALA 132
PRO 202 0.15 HIS 119 -0.12 ALA 132
PRO 202 0.19 VAL 120 -0.10 LEU 189
PRO 202 0.22 ALA 121 -0.09 ASN 61
PRO 202 0.18 HIS 122 -0.11 LYS 172
TYR 204 0.13 TRP 123 -0.15 GLY 63
SER 187 0.09 ASN 124 -0.14 GLY 63
SER 187 0.08 SER 125 -0.17 LYS 172
SER 187 0.11 ALA 126 -0.15 LYS 172
PHE 84 0.11 LYS 127 -0.16 GLY 63
ASP 41 0.08 TYR 128 -0.21 GLY 63
GLN 74 0.11 SER 129 -0.26 GLY 63
GLN 74 0.17 SER 130 -0.30 GLY 63
ASN 73 0.20 LEU 131 -0.29 GLY 63
ASN 73 0.20 ALA 132 -0.35 GLY 63
ASN 73 0.13 GLU 133 -0.27 GLY 63
PRO 21 0.11 ALA 134 -0.21 GLY 63
GLU 71 0.18 ALA 135 -0.20 ASN 244
ILE 22 0.16 SER 136 -0.16 TRP 5
ARG 254 0.13 LYS 137 -0.14 TRP 5
PRO 195 0.18 ALA 138 -0.11 TYR 204
THR 255 0.12 ASP 139 -0.09 TRP 5
THR 255 0.08 GLY 140 -0.12 GLY 63
TRP 123 0.09 LEU 141 -0.10 ASN 244
SER 187 0.08 ALA 142 -0.06 LYS 172
PRO 202 0.11 VAL 143 -0.07 ALA 132
PRO 202 0.09 ILE 144 -0.07 ILE 210
HIS 64 0.11 GLY 145 -0.07 ALA 132
SER 48 0.12 VAL 146 -0.11 VAL 109
SER 231 0.13 LEU 147 -0.13 PRO 155
SER 48 0.12 MET 148 -0.14 GLU 14
GLU 214 0.16 LYS 149 -0.19 GLU 14
SER 48 0.14 VAL 150 -0.21 GLU 14
SER 48 0.17 GLY 151 -0.20 GLU 14
SER 48 0.19 GLU 152 -0.15 GLU 14
SER 50 0.13 ALA 153 -0.16 GLY 235
SER 50 0.15 ASN 154 -0.16 GLY 235
ASN 52 0.11 PRO 155 -0.20 ILE 216
ASP 180 0.14 LYS 156 -0.24 SER 187
PRO 202 0.14 LEU 157 -0.18 ILE 216
PRO 202 0.16 GLN 158 -0.22 GLY 235
PRO 202 0.19 LYS 159 -0.24 GLY 235
TRP 5 0.21 VAL 160 -0.22 GLY 235
TRP 5 0.20 LEU 161 -0.23 GLY 235
TRP 5 0.23 ASP 162 -0.29 GLY 235
TRP 5 0.29 ALA 163 -0.29 GLY 235
TRP 5 0.31 LEU 164 -0.28 GLY 235
TRP 5 0.33 GLN 165 -0.38 GLY 235
TRP 5 0.39 ALA 166 -0.40 GLY 235
TRP 5 0.45 ILE 167 -0.29 GLY 235
TRP 5 0.44 LYS 168 -0.30 GLY 235
TRP 5 0.59 THR 169 -0.22 SER 130
TRP 5 0.77 LYS 170 -0.25 SER 130
TRP 5 0.75 GLY 171 -0.25 SER 130
TRP 5 0.58 LYS 172 -0.39 ARG 173
TRP 5 0.50 ARG 173 -0.39 LYS 172
TRP 5 0.41 ALA 174 -0.31 GLY 235
LEU 19 0.37 PRO 175 -0.30 GLY 235
PRO 202 0.32 PHE 176 -0.26 GLY 235
PRO 202 0.30 THR 177 -0.25 GLY 235
PRO 202 0.25 ASN 178 -0.25 LEU 189
PRO 202 0.23 PHE 179 -0.24 LEU 189
PRO 202 0.19 ASP 180 -0.30 LEU 189
PRO 202 0.19 PRO 181 -0.25 LEU 189
THR 183 0.19 SER 182 -0.37 LEU 189
SER 182 0.19 THR 183 -0.32 SER 187
GLU 152 0.15 LEU 184 -0.19 SER 187
SER 48 0.18 LEU 185 -0.18 LEU 184
SER 48 0.24 PRO 186 -0.21 LYS 156
SER 48 0.26 SER 187 -0.32 THR 183
LEU 189 0.19 SER 188 -0.25 THR 183
SER 188 0.19 LEU 189 -0.37 SER 182
GLU 102 0.13 ASP 190 -0.27 SER 182
TYR 114 0.12 PHE 191 -0.23 SER 182
SER 231 0.12 TRP 192 -0.16 SER 182
SER 231 0.11 THR 193 -0.13 SER 182
ASP 236 0.15 TYR 194 -0.09 SER 182
ALA 138 0.18 PRO 195 -0.10 SER 85
ASP 236 0.20 GLY 196 -0.08 SER 85
VAL 233 0.22 SER 197 -0.07 HIS 103
ASN 69 0.23 LEU 198 -0.14 ALA 135
VAL 233 0.28 THR 199 -0.17 ALA 135
VAL 62 0.37 HIS 200 -0.19 ALA 132
VAL 62 0.51 PRO 201 -0.17 TRP 5
GLY 171 0.45 PRO 202 -0.15 TRP 5
GLY 171 0.34 LEU 203 -0.12 HIS 103
ASN 69 0.27 TYR 204 -0.11 ALA 138
VAL 233 0.21 GLU 205 -0.09 SER 85
GLU 71 0.13 SER 206 -0.08 TRP 5
ASP 236 0.11 VAL 207 -0.07 SER 85
ASP 236 0.10 THR 208 -0.07 SER 85
ASP 236 0.10 TRP 209 -0.07 SER 182
SER 231 0.08 ILE 210 -0.13 SER 182
SER 231 0.11 ILE 211 -0.15 SER 182
GLU 102 0.11 CYS 212 -0.20 SER 182
GLU 102 0.16 LYS 213 -0.20 THR 35
LYS 149 0.16 GLU 214 -0.21 THR 35
SER 48 0.17 SER 215 -0.22 VAL 109
SER 48 0.18 ILE 216 -0.20 PRO 155
SER 48 0.19 SER 217 -0.17 ASP 110
SER 48 0.13 VAL 218 -0.13 GLU 14
SER 48 0.12 SER 219 -0.15 GLU 14
SER 48 0.10 SER 220 -0.17 GLU 14
SER 48 0.08 GLU 221 -0.17 GLY 235
GLY 6 0.07 GLN 222 -0.17 GLY 235
SER 231 0.07 LEU 223 -0.14 ALA 132
GLY 111 0.05 ALA 224 -0.15 ALA 132
GLY 6 0.13 GLN 225 -0.18 GLY 235
GLY 6 0.17 PHE 226 -0.18 ALA 132
GLY 6 0.11 ARG 227 -0.20 ALA 132
ASN 11 0.18 SER 228 -0.19 ALA 132
GLY 6 0.34 LEU 229 -0.21 ALA 132
ASN 11 0.48 LEU 230 -0.22 ALA 132
GLY 6 0.79 SER 231 -0.25 ALA 132
ASN 11 0.88 ASN 232 -0.22 SER 130
ASN 11 0.92 VAL 233 -0.22 ARG 173
LYS 10 0.75 GLU 234 -0.34 ALA 166
LYS 10 0.81 GLY 235 -0.40 ALA 166
LYS 10 0.98 ASP 236 -0.28 ALA 166
LYS 10 0.86 ASN 237 -0.21 GLN 165
LYS 10 0.63 ALA 238 -0.19 SER 130
ASP 8 0.63 VAL 239 -0.23 ALA 132
ASP 8 0.31 PRO 240 -0.25 ALA 132
ASP 8 0.25 MET 241 -0.26 ALA 132
GLY 111 0.22 GLN 242 -0.24 ALA 132
SER 231 0.29 HIS 243 -0.25 ALA 132
SER 231 0.35 ASN 244 -0.26 ALA 132
SER 231 0.34 ASN 245 -0.20 ALA 132
SER 231 0.38 ARG 246 -0.20 PRO 13
ASP 236 0.39 PRO 247 -0.27 LYS 113
ASP 236 0.33 THR 248 -0.22 SER 17
ASP 236 0.36 GLN 249 -0.19 LYS 113
ASP 236 0.34 PRO 250 -0.18 GLY 111
ASP 236 0.29 LEU 251 -0.12 GLY 111
ASP 236 0.31 LYS 252 -0.11 GLY 111
ASP 236 0.26 GLY 253 -0.09 LYS 18
ASP 236 0.23 ARG 254 -0.08 THR 255
ASP 236 0.19 THR 255 -0.09 SER 182
ASP 236 0.17 VAL 256 -0.12 SER 182
ASP 236 0.13 ARG 257 -0.13 SER 182
LYS 113 0.12 ALA 258 -0.18 SER 182
GLU 102 0.11 SER 259 -0.20 SER 182
GLU 102 0.13 PHE 260 -0.21 SER 182

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.