CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MADHURJA truncatula medicago single  ***

CA strain for 260222211152815844

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 1ASP 2 0.0055
ASP 2LEU 3 -0.0093
LEU 3ARG 4 -0.0016
ARG 4GLU 5 0.0013
GLU 5SER 6 -0.0010
SER 6ILE 7 0.0016
ILE 7ALA 8 -0.0062
ALA 8ASN 9 0.0009
ASN 9GLN 10 -0.0024
GLN 10THR 11 0.0036
THR 11ASN 12 -0.0172
ASN 12VAL 13 0.0023
VAL 13SER 14 0.0096
SER 14LEU 15 -0.0265
LEU 15SER 16 -0.0182
SER 16VAL 17 0.0343
VAL 17ALA 18 -0.0365
ALA 18LYS 19 -0.0208
LYS 19HIS 20 0.0363
HIS 20LEU 21 0.0073
LEU 21PHE 22 -0.0245
PHE 22SER 23 0.0240
SER 23LYS 24 0.0118
LYS 24GLU 25 -0.0095
GLU 25SER 26 -0.1016
SER 26ASP 27 0.0068
ASP 27ASN 28 0.0090
ASN 28ASN 29 0.0487
ASN 29ILE 30 -0.1048
ILE 30VAL 31 0.0315
VAL 31PHE 32 -0.0657
PHE 32SER 33 0.0651
SER 33PRO 34 -0.0267
PRO 34LEU 35 0.0290
LEU 35SER 36 -0.0177
SER 36LEU 37 0.0082
LEU 37GLN 38 -0.0195
GLN 38VAL 39 -0.0012
VAL 39VAL 40 -0.0022
VAL 40LEU 41 0.0216
LEU 41SER 42 -0.0135
SER 42ILE 43 0.0056
ILE 43ILE 44 0.0052
ILE 44ALA 45 0.0182
ALA 45SER 46 -0.0064
SER 46GLY 47 0.0116
GLY 47SER 48 -0.0014
SER 48GLU 49 -0.0009
GLU 49GLY 50 0.0007
GLY 50PRO 51 0.0002
PRO 51THR 52 0.0019
THR 52GLN 53 0.0009
GLN 53GLN 54 0.0029
GLN 54GLN 55 -0.0053
GLN 55LEU 56 0.0092
LEU 56PHE 57 0.0014
PHE 57ASN 58 -0.0014
ASN 58PHE 59 -0.0201
PHE 59LEU 60 0.0035
LEU 60GLN 61 0.0029
GLN 61SER 62 0.0057
SER 62LYS 63 -0.0077
LYS 63SER 64 0.0059
SER 64THR 65 0.0133
THR 65ASP 66 -0.0025
ASP 66HIS 67 0.0092
HIS 67LEU 68 -0.0007
LEU 68ASN 69 0.0018
ASN 69TYR 70 0.0072
TYR 70PHE 71 0.0149
PHE 71ALA 72 0.0006
ALA 72SER 73 0.0007
SER 73GLN 74 0.0003
GLN 74LEU 75 0.0101
LEU 75VAL 76 0.0030
VAL 76SER 77 -0.0047
SER 77VAL 78 0.0098
VAL 78ILE 79 0.0056
ILE 79LEU 80 -0.0026
LEU 80SER 81 0.0196
SER 81ASP 82 0.0277
ASP 82ALA 83 0.0059
ALA 83SER 84 -0.0164
SER 84PRO 85 -0.0082
PRO 85ALA 86 -0.0007
ALA 86GLY 87 0.0161
GLY 87GLY 88 -0.0085
GLY 88PRO 89 -0.0154
PRO 89LEU 90 0.0439
LEU 90LEU 91 -0.0007
LEU 91SER 92 -0.0122
SER 92PHE 93 0.0105
PHE 93VAL 94 -0.0062
VAL 94ASP 95 0.0090
ASP 95GLY 96 -0.0055
GLY 96VAL 97 -0.0052
VAL 97TRP 98 0.0023
TRP 98VAL 99 -0.0001
VAL 99ASP 100 0.0011
ASP 100GLN 101 -0.0028
GLN 101THR 102 0.0000
THR 102LEU 103 0.0031
LEU 103SER 104 0.0058
SER 104LEU 105 -0.0006
LEU 105GLN 106 0.0046
GLN 106PRO 107 0.0016
PRO 107SER 108 0.0003
SER 108PHE 109 -0.0088
PHE 109GLN 110 -0.0050
GLN 110GLN 111 0.0054
GLN 111ILE 112 -0.0035
ILE 112VAL 113 0.0043
VAL 113SER 114 -0.0021
SER 114THR 115 0.0010
THR 115HIS 116 0.0031
HIS 116PHE 117 -0.0053
PHE 117LYS 118 0.0010
LYS 118ALA 119 0.0020
ALA 119ALA 120 0.0030
ALA 120LEU 121 0.0042
LEU 121SER 122 0.0036
SER 122SER 123 0.0015
SER 123VAL 124 0.0003
VAL 124ASP 125 -0.0005
ASP 125PHE 126 -0.0009
PHE 126GLN 127 -0.0004
GLN 127ASN 128 0.0008
ASN 128LYS 129 0.0001
LYS 129ALA 130 -0.0023
ALA 130VAL 131 0.0015
VAL 131GLU 132 0.0003
GLU 132VAL 133 -0.0014
VAL 133THR 134 -0.0003
THR 134ASN 135 0.0038
ASN 135GLU 136 -0.0028
GLU 136VAL 137 -0.0027
VAL 137ASN 138 0.0069
ASN 138SER 139 -0.0038
SER 139TRP 140 -0.0075
TRP 140ALA 141 -0.0004
ALA 141GLU 142 0.0021
GLU 142LYS 143 -0.0107
LYS 143GLU 144 -0.0106
GLU 144THR 145 0.0130
THR 145ASN 146 -0.0129
ASN 146GLY 147 -0.0002
GLY 147LEU 148 0.0132
LEU 148ILE 149 0.0135
ILE 149LYS 150 -0.0061
LYS 150GLU 151 -0.0034
GLU 151LEU 152 0.0114
LEU 152LEU 153 -0.0158
LEU 153PRO 154 0.0085
PRO 154LEU 155 -0.0017
LEU 155GLY 156 -0.0009
GLY 156SER 157 0.0032
SER 157VAL 158 -0.0013
VAL 158ASN 159 -0.0038
ASN 159ASN 160 -0.0039
ASN 160ALA 161 0.0015
ALA 161THR 162 -0.0011
THR 162ARG 163 0.0030
ARG 163LEU 164 -0.0069
LEU 164ILE 165 -0.0025
ILE 165PHE 166 -0.0179
PHE 166ALA 167 0.0237
ALA 167ASN 168 -0.0407
ASN 168ALA 169 -0.0044
ALA 169LEU 170 -0.0617
LEU 170TYR 171 -0.0052
TYR 171PHE 172 -0.0571
PHE 172LYS 173 -0.0324
LYS 173GLY 174 -0.0660
GLY 174ALA 175 -0.1044
ALA 175TRP 176 0.0717
TRP 176ASN 177 -0.0271
ASN 177ASP 178 0.0514
ASP 178LYS 179 0.0167
LYS 179PHE 180 -0.0355
PHE 180ASP 181 0.0472
ASP 181ALA 182 0.0397
ALA 182SER 183 -0.0420
SER 183LYS 184 -0.0125
LYS 184ARG 185 0.0416
ARG 185LYS 186 -0.0556
LYS 186THR 187 -0.0015
THR 187THR 188 0.0503
THR 188SER 189 -0.0216
SER 189PHE 190 -0.0344
PHE 190THR 191 -0.0703
THR 191PHE 192 0.0150

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.