CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MADHURJA 389 AA truncatula medicago single  ***

<R2> analysis for 260222215516854067

---  normal mode 41  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0804
MET 10.0216
ASP 20.0175
LEU 30.0138
ARG 40.0145
GLU 50.0086
SER 60.0083
ILE 70.0104
ALA 80.0116
ASN 90.0100
GLN 100.0084
THR 110.0117
ASN 120.0132
VAL 130.0124
SER 140.0119
LEU 150.0125
SER 160.0146
VAL 170.0131
ALA 180.0113
LYS 190.0152
HIS 200.0199
LEU 210.0146
PHE 220.0132
SER 230.0246
LYS 240.0322
GLU 250.0671
SER 260.0364
ASP 270.0623
ASN 280.0437
ASN 290.0124
ILE 300.0070
VAL 310.0029
PHE 320.0044
SER 330.0067
PRO 340.0078
LEU 350.0067
SER 360.0054
LEU 370.0047
GLN 380.0050
VAL 390.0023
VAL 400.0022
LEU 410.0030
SER 420.0017
ILE 430.0030
ILE 440.0035
ALA 450.0048
SER 460.0048
GLY 470.0046
SER 480.0042
GLU 490.0063
GLY 500.0054
PRO 510.0038
THR 520.0030
GLN 530.0060
GLN 540.0075
GLN 550.0042
LEU 560.0052
PHE 570.0085
ASN 580.0104
PHE 590.0082
LEU 600.0072
GLN 610.0104
PRO 620.0104
LYS 630.0182
SER 640.0173
THR 650.0135
ASP 660.0169
HIS 670.0148
LEU 680.0098
ASN 690.0111
TYR 700.0128
PHE 710.0088
ALA 720.0081
SER 730.0107
GLN 740.0098
LEU 750.0070
VAL 760.0079
SER 770.0120
VAL 780.0103
ILE 790.0085
LEU 800.0092
SER 810.0107
ASP 820.0136
ALA 830.0175
SER 840.0309
PRO 850.0560
ALA 860.0400
GLY 870.0290
GLY 880.0160
PRO 890.0166
LEU 900.0162
LEU 910.0115
SER 920.0100
PHE 930.0080
VAL 940.0061
ASP 950.0042
GLY 960.0050
VAL 970.0065
TRP 980.0063
VAL 990.0064
ASP 1000.0066
GLN 1010.0050
THR 1020.0054
LEU 1030.0035
SER 1040.0054
LEU 1050.0050
GLN 1060.0062
PRO 1070.0068
SER 1080.0028
PHE 1090.0037
GLN 1100.0044
GLN 1110.0052
ILE 1120.0063
VAL 1130.0041
SER 1140.0055
THR 1150.0107
HIS 1160.0108
PHE 1170.0057
LYS 1180.0066
ALA 1190.0038
ALA 1200.0037
LEU 1210.0048
SER 1220.0043
SER 1230.0050
VAL 1240.0057
ASP 1250.0077
PHE 1260.0095
GLN 1270.0129
ASN 1280.0137
LYS 1290.0106
ALA 1300.0115
VAL 1310.0112
GLU 1320.0110
VAL 1330.0093
THR 1340.0096
ASN 1350.0095
GLU 1360.0095
VAL 1370.0090
ASN 1380.0078
SER 1390.0092
TRP 1400.0102
ALA 1410.0080
GLU 1420.0096
LYS 1430.0147
GLU 1440.0147
THR 1450.0122
ASN 1460.0172
GLY 1470.0127
LEU 1480.0118
ILE 1490.0080
LYS 1500.0070
GLU 1510.0055
LEU 1520.0052
LEU 1530.0065
PRO 1540.0063
LEU 1550.0076
GLY 1560.0079
SER 1570.0070
VAL 1580.0078
ASN 1590.0131
ASN 1600.0140
ALA 1610.0144
THR 1620.0103
ARG 1630.0077
LEU 1640.0074
ILE 1650.0058
PHE 1660.0059
ALA 1670.0048
ASN 1680.0045
ALA 1690.0054
LEU 1700.0075
TYR 1710.0103
PHE 1720.0117
LYS 1730.0143
GLY 1740.0160
ALA 1750.0122
TRP 1760.0071
ASN 1770.0066
ASP 1780.0068
LYS 1790.0098
PHE 1800.0155
ASP 1810.0446
ALA 1820.0448
SER 1830.0626
LYS 1840.0452
THR 1850.0214
GLU 1860.0123
ASP 1870.0052
TYR 1880.0124
GLU 1890.0192
PHE 1900.0127
HIS 1910.0141
LEU 1920.0138
LEU 1930.0297
ASN 1940.0431
GLY 1950.0355
SER 1960.0178
PRO 1970.0183
VAL 1980.0150
LYS 1990.0197
VAL 2000.0102
PRO 2010.0046
PHE 2020.0035
MET 2030.0095
THR 2040.0177
SER 2050.0178
LYS 2060.0191
LYS 2070.0163
LYS 2080.0180
GLN 2090.0110
PHE 2100.0116
ILE 2110.0090
ARG 2120.0079
ALA 2130.0024
PHE 2140.0025
ASP 2150.0137
GLY 2160.0159
PHE 2170.0051
LYS 2180.0036
VAL 2190.0063
LEU 2200.0062
GLY 2210.0079
LEU 2220.0049
PRO 2230.0078
TYR 2240.0089
LYS 2250.0133
GLN 2260.0131
GLY 2270.0326
GLU 2280.0334
ASP 2290.0199
LYS 2300.0223
ARG 2310.0092
GLN 2320.0096
PHE 2330.0091
THR 2340.0095
MET 2350.0070
TYR 2360.0073
PHE 2370.0048
PHE 2380.0047
LEU 2390.0058
PRO 2400.0094
ASN 2410.0158
ALA 2420.0239
LYS 2430.0214
ASP 2440.0277
GLY 2450.0161
LEU 2460.0141
ALA 2470.0122
ALA 2480.0108
LEU 2490.0097
VAL 2500.0086
GLU 2510.0090
LYS 2520.0111
VAL 2530.0096
ALA 2540.0089
SER 2550.0129
GLU 2560.0103
SER 2570.0064
GLU 2580.0048
LEU 2590.0039
LEU 2600.0033
GLN 2610.0047
HIS 2620.0047
LYS 2630.0054
LEU 2640.0077
PRO 2650.0095
PHE 2660.0109
GLY 2670.0151
LYS 2680.0150
VAL 2690.0186
GLU 2700.0160
VAL 2710.0134
GLY 2720.0107
ASP 2730.0122
PHE 2740.0110
ARG 2750.0080
ILE 2760.0057
PRO 2770.0040
LYS 2780.0050
PHE 2790.0030
ASN 2800.0025
ILE 2810.0021
SER 2820.0018
PHE 2830.0033
GLY 2840.0032
LEU 2850.0032
GLU 2860.0033
THR 2870.0032
SER 2880.0036
ASP 2890.0109
MET 2900.0126
LEU 2910.0081
LYS 2920.0097
GLU 2930.0201
LEU 2940.0188
GLY 2950.0112
VAL 2960.0069
VAL 2970.0031
LEU 2980.0022
PRO 2990.0023
PHE 3000.0011
SER 3010.0033
GLY 3020.0036
GLY 3030.0042
GLY 3040.0045
LEU 3050.0040
THR 3060.0070
LYS 3070.0050
MET 3080.0040
VAL 3090.0055
ASN 3100.0078
SER 3110.0118
SER 3120.0207
VAL 3130.0120
SER 3140.0084
GLN 3150.0158
ASN 3160.0130
LEU 3170.0030
CYS 3180.0039
VAL 3190.0060
SER 3200.0060
ASN 3210.0046
ILE 3220.0042
PHE 3230.0042
HIS 3240.0039
LYS 3250.0042
SER 3260.0053
PHE 3270.0069
ILE 3280.0071
GLU 3290.0079
VAL 3300.0059
ASN 3310.0134
GLU 3320.0138
GLU 3330.0132
GLY 3340.0110
THR 3350.0236
GLU 3360.0282
ALA 3370.0693
ALA 3380.0804
ALA 3390.0691
ALA 3400.0640
THR 3410.0413
ALA 3420.0393
ALA 3430.0397
THR 3440.0344
ILE 3450.0156
LEU 3460.0218
LEU 3470.0262
ARG 3480.0323
SER 3490.0395
ALA 3500.0592
MET 3510.0305
SER 3520.0520
ILE 3530.0551
PRO 3540.0272
PRO 3550.0345
ARG 3560.0169
LEU 3570.0094
ASP 3580.0101
PHE 3590.0080
VAL 3600.0064
ALA 3610.0083
ASP 3620.0098
HIS 3630.0094
PRO 3640.0104
PHE 3650.0045
LEU 3660.0046
PHE 3670.0044
MET 3680.0062
ILE 3690.0092
ARG 3700.0089
GLU 3710.0083
ASP 3720.0079
LEU 3730.0067
THR 3740.0077
GLY 3750.0095
THR 3760.0091
ILE 3770.0102
ILE 3780.0093
PHE 3790.0081
VAL 3800.0077
GLY 3810.0029
LEU 3820.0048
VAL 3830.0081
LEU 3840.0122
ASN 3850.0073
PRO 3860.0069
LEU 3870.0109
ALA 3880.0162
GLY 3890.0094

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.