CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MADHURJA 389 AA truncatula medicago single  ***

<R2> analysis for 260222215516854067

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0569
MET 10.0221
ASP 20.0122
LEU 30.0104
ARG 40.0140
GLU 50.0137
SER 60.0105
ILE 70.0157
ALA 80.0171
ASN 90.0143
GLN 100.0151
THR 110.0139
ASN 120.0139
VAL 130.0134
SER 140.0118
LEU 150.0069
SER 160.0066
VAL 170.0079
ALA 180.0082
LYS 190.0124
HIS 200.0131
LEU 210.0104
PHE 220.0102
SER 230.0197
LYS 240.0167
GLU 250.0081
SER 260.0119
ASP 270.0169
ASN 280.0140
ASN 290.0049
ILE 300.0048
VAL 310.0027
PHE 320.0034
SER 330.0077
PRO 340.0082
LEU 350.0129
SER 360.0101
LEU 370.0077
GLN 380.0110
VAL 390.0150
VAL 400.0113
LEU 410.0119
SER 420.0095
ILE 430.0105
ILE 440.0092
ALA 450.0123
SER 460.0096
GLY 470.0139
SER 480.0153
GLU 490.0175
GLY 500.0234
PRO 510.0251
THR 520.0222
GLN 530.0192
GLN 540.0232
GLN 550.0186
LEU 560.0182
PHE 570.0179
ASN 580.0234
PHE 590.0167
LEU 600.0136
GLN 610.0178
PRO 620.0129
LYS 630.0232
SER 640.0166
THR 650.0062
ASP 660.0178
HIS 670.0103
LEU 680.0063
ASN 690.0154
TYR 700.0179
PHE 710.0134
ALA 720.0207
SER 730.0231
GLN 740.0203
LEU 750.0185
VAL 760.0223
SER 770.0195
VAL 780.0118
ILE 790.0109
LEU 800.0132
SER 810.0145
ASP 820.0109
ALA 830.0144
SER 840.0215
PRO 850.0475
ALA 860.0122
GLY 870.0139
GLY 880.0078
PRO 890.0113
LEU 900.0093
LEU 910.0087
SER 920.0085
PHE 930.0091
VAL 940.0068
ASP 950.0141
GLY 960.0145
VAL 970.0205
TRP 980.0229
VAL 990.0223
ASP 1000.0249
GLN 1010.0276
THR 1020.0307
LEU 1030.0148
SER 1040.0173
LEU 1050.0139
GLN 1060.0180
PRO 1070.0249
SER 1080.0275
PHE 1090.0175
GLN 1100.0164
GLN 1110.0243
ILE 1120.0249
VAL 1130.0238
SER 1140.0269
THR 1150.0342
HIS 1160.0290
PHE 1170.0242
LYS 1180.0273
ALA 1190.0206
ALA 1200.0162
LEU 1210.0151
SER 1220.0194
SER 1230.0236
VAL 1240.0260
ASP 1250.0255
PHE 1260.0128
GLN 1270.0092
ASN 1280.0284
LYS 1290.0355
ALA 1300.0094
VAL 1310.0235
GLU 1320.0353
VAL 1330.0232
THR 1340.0138
ASN 1350.0199
GLU 1360.0268
VAL 1370.0260
ASN 1380.0229
SER 1390.0240
TRP 1400.0204
ALA 1410.0175
GLU 1420.0230
LYS 1430.0235
GLU 1440.0112
THR 1450.0141
ASN 1460.0293
GLY 1470.0313
LEU 1480.0217
ILE 1490.0173
LYS 1500.0271
GLU 1510.0207
LEU 1520.0185
LEU 1530.0186
PRO 1540.0135
LEU 1550.0121
GLY 1560.0192
SER 1570.0156
VAL 1580.0129
ASN 1590.0215
ASN 1600.0207
ALA 1610.0320
THR 1620.0264
ARG 1630.0244
LEU 1640.0198
ILE 1650.0177
PHE 1660.0144
ALA 1670.0152
ASN 1680.0080
ALA 1690.0066
LEU 1700.0057
TYR 1710.0095
PHE 1720.0114
LYS 1730.0140
GLY 1740.0150
ALA 1750.0109
TRP 1760.0113
ASN 1770.0086
ASP 1780.0080
LYS 1790.0104
PHE 1800.0090
ASP 1810.0119
ALA 1820.0165
SER 1830.0269
LYS 1840.0179
THR 1850.0127
GLU 1860.0128
ASP 1870.0106
TYR 1880.0114
GLU 1890.0125
PHE 1900.0125
HIS 1910.0145
LEU 1920.0156
LEU 1930.0224
ASN 1940.0251
GLY 1950.0248
SER 1960.0224
PRO 1970.0172
VAL 1980.0119
LYS 1990.0097
VAL 2000.0095
PRO 2010.0092
PHE 2020.0099
MET 2030.0083
THR 2040.0081
SER 2050.0026
LYS 2060.0035
LYS 2070.0049
LYS 2080.0036
GLN 2090.0061
PHE 2100.0098
ILE 2110.0086
ARG 2120.0094
ALA 2130.0107
PHE 2140.0111
ASP 2150.0144
GLY 2160.0104
PHE 2170.0089
LYS 2180.0084
VAL 2190.0080
LEU 2200.0078
GLY 2210.0098
LEU 2220.0099
PRO 2230.0162
TYR 2240.0140
LYS 2250.0094
GLN 2260.0097
GLY 2270.0184
GLU 2280.0356
ASP 2290.0162
LYS 2300.0408
ARG 2310.0190
GLN 2320.0219
PHE 2330.0152
THR 2340.0165
MET 2350.0096
TYR 2360.0111
PHE 2370.0056
PHE 2380.0051
LEU 2390.0061
PRO 2400.0060
ASN 2410.0072
ALA 2420.0039
LYS 2430.0098
ASP 2440.0084
GLY 2450.0064
LEU 2460.0081
ALA 2470.0146
ALA 2480.0142
LEU 2490.0112
VAL 2500.0126
GLU 2510.0166
LYS 2520.0167
VAL 2530.0139
ALA 2540.0118
SER 2550.0167
GLU 2560.0162
SER 2570.0133
GLU 2580.0178
LEU 2590.0170
LEU 2600.0144
GLN 2610.0150
HIS 2620.0173
LYS 2630.0140
LEU 2640.0162
PRO 2650.0150
PHE 2660.0164
GLY 2670.0134
LYS 2680.0095
VAL 2690.0111
GLU 2700.0129
VAL 2710.0048
GLY 2720.0061
ASP 2730.0036
PHE 2740.0034
ARG 2750.0071
ILE 2760.0074
PRO 2770.0093
LYS 2780.0090
PHE 2790.0082
ASN 2800.0080
ILE 2810.0057
SER 2820.0059
PHE 2830.0035
GLY 2840.0066
LEU 2850.0134
GLU 2860.0167
THR 2870.0151
SER 2880.0202
ASP 2890.0257
MET 2900.0192
LEU 2910.0116
LYS 2920.0153
GLU 2930.0202
LEU 2940.0129
GLY 2950.0082
VAL 2960.0097
VAL 2970.0114
LEU 2980.0147
PRO 2990.0141
PHE 3000.0143
SER 3010.0089
GLY 3020.0080
GLY 3030.0116
GLY 3040.0182
LEU 3050.0155
THR 3060.0202
LYS 3070.0156
MET 3080.0151
VAL 3090.0148
ASN 3100.0230
SER 3110.0249
SER 3120.0250
VAL 3130.0089
SER 3140.0164
GLN 3150.0257
ASN 3160.0155
LEU 3170.0064
CYS 3180.0095
VAL 3190.0151
SER 3200.0204
ASN 3210.0180
ILE 3220.0141
PHE 3230.0127
HIS 3240.0069
LYS 3250.0063
SER 3260.0020
PHE 3270.0074
ILE 3280.0097
GLU 3290.0144
VAL 3300.0143
ASN 3310.0165
GLU 3320.0140
GLU 3330.0147
GLY 3340.0127
THR 3350.0081
GLU 3360.0068
ALA 3370.0127
ALA 3380.0159
ALA 3390.0118
ALA 3400.0111
THR 3410.0165
ALA 3420.0101
ALA 3430.0257
THR 3440.0162
ILE 3450.0098
LEU 3460.0156
LEU 3470.0153
ARG 3480.0263
SER 3490.0546
ALA 3500.0262
MET 3510.0428
SER 3520.0406
ILE 3530.0569
PRO 3540.0529
PRO 3550.0273
ARG 3560.0135
LEU 3570.0050
ASP 3580.0018
PHE 3590.0021
VAL 3600.0032
ALA 3610.0102
ASP 3620.0101
HIS 3630.0100
PRO 3640.0098
PHE 3650.0024
LEU 3660.0042
PHE 3670.0053
MET 3680.0048
ILE 3690.0121
ARG 3700.0117
GLU 3710.0126
ASP 3720.0188
LEU 3730.0271
THR 3740.0118
GLY 3750.0109
THR 3760.0113
ILE 3770.0104
ILE 3780.0104
PHE 3790.0068
VAL 3800.0057
GLY 3810.0021
LEU 3820.0019
VAL 3830.0059
LEU 3840.0067
ASN 3850.0078
PRO 3860.0070
LEU 3870.0047
ALA 3880.0029
GLY 3890.0058

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.