CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MADHURJA 389 AA truncatula medicago single  ***

<R2> analysis for 260222215516854067

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1014
MET 10.0176
ASP 20.0118
LEU 30.0139
ARG 40.0125
GLU 50.0082
SER 60.0062
ILE 70.0035
ALA 80.0057
ASN 90.0044
GLN 100.0020
THR 110.0045
ASN 120.0024
VAL 130.0062
SER 140.0075
LEU 150.0089
SER 160.0084
VAL 170.0116
ALA 180.0119
LYS 190.0130
HIS 200.0136
LEU 210.0102
PHE 220.0093
SER 230.0157
LYS 240.0139
GLU 250.0212
SER 260.0168
ASP 270.0372
ASN 280.0323
ASN 290.0171
ILE 300.0170
VAL 310.0153
PHE 320.0153
SER 330.0120
PRO 340.0103
LEU 350.0097
SER 360.0118
LEU 370.0079
GLN 380.0077
VAL 390.0046
VAL 400.0042
LEU 410.0062
SER 420.0034
ILE 430.0024
ILE 440.0037
ALA 450.0036
SER 460.0029
GLY 470.0052
SER 480.0022
GLU 490.0056
GLY 500.0135
PRO 510.0185
THR 520.0112
GLN 530.0090
GLN 540.0158
GLN 550.0166
LEU 560.0144
PHE 570.0143
ASN 580.0191
PHE 590.0148
LEU 600.0136
GLN 610.0123
PRO 620.0121
LYS 630.0164
SER 640.0112
THR 650.0081
ASP 660.0097
HIS 670.0102
LEU 680.0088
ASN 690.0042
TYR 700.0045
PHE 710.0033
ALA 720.0044
SER 730.0033
GLN 740.0042
LEU 750.0087
VAL 760.0101
SER 770.0103
VAL 780.0092
ILE 790.0113
LEU 800.0140
SER 810.0225
ASP 820.0220
ALA 830.0195
SER 840.0207
PRO 850.0488
ALA 860.0170
GLY 870.0165
GLY 880.0044
PRO 890.0109
LEU 900.0141
LEU 910.0193
SER 920.0231
PHE 930.0207
VAL 940.0176
ASP 950.0092
GLY 960.0063
VAL 970.0053
TRP 980.0029
VAL 990.0065
ASP 1000.0063
GLN 1010.0119
THR 1020.0153
LEU 1030.0122
SER 1040.0106
LEU 1050.0123
GLN 1060.0136
PRO 1070.0270
SER 1080.0234
PHE 1090.0143
GLN 1100.0179
GLN 1110.0199
ILE 1120.0117
VAL 1130.0112
SER 1140.0122
THR 1150.0092
HIS 1160.0054
PHE 1170.0063
LYS 1180.0074
ALA 1190.0101
ALA 1200.0095
LEU 1210.0109
SER 1220.0064
SER 1230.0038
VAL 1240.0039
ASP 1250.0098
PHE 1260.0046
GLN 1270.0057
ASN 1280.0185
LYS 1290.0155
ALA 1300.0080
VAL 1310.0071
GLU 1320.0051
VAL 1330.0015
THR 1340.0020
ASN 1350.0062
GLU 1360.0067
VAL 1370.0051
ASN 1380.0046
SER 1390.0127
TRP 1400.0139
ALA 1410.0124
GLU 1420.0125
LYS 1430.0263
GLU 1440.0325
THR 1450.0237
ASN 1460.0260
GLY 1470.0114
LEU 1480.0127
ILE 1490.0103
LYS 1500.0041
GLU 1510.0076
LEU 1520.0091
LEU 1530.0074
PRO 1540.0098
LEU 1550.0074
GLY 1560.0057
SER 1570.0060
VAL 1580.0045
ASN 1590.0114
ASN 1600.0106
ALA 1610.0117
THR 1620.0075
ARG 1630.0083
LEU 1640.0067
ILE 1650.0039
PHE 1660.0042
ALA 1670.0070
ASN 1680.0109
ALA 1690.0151
LEU 1700.0147
TYR 1710.0163
PHE 1720.0114
LYS 1730.0094
GLY 1740.0085
ALA 1750.0118
TRP 1760.0087
ASN 1770.0112
ASP 1780.0100
LYS 1790.0042
PHE 1800.0025
ASP 1810.0045
ALA 1820.0094
SER 1830.0110
LYS 1840.0084
THR 1850.0119
GLU 1860.0128
ASP 1870.0175
TYR 1880.0099
GLU 1890.0140
PHE 1900.0050
HIS 1910.0099
LEU 1920.0103
LEU 1930.0196
ASN 1940.0371
GLY 1950.0382
SER 1960.0281
PRO 1970.0210
VAL 1980.0205
LYS 1990.0257
VAL 2000.0235
PRO 2010.0195
PHE 2020.0160
MET 2030.0121
THR 2040.0091
SER 2050.0113
LYS 2060.0133
LYS 2070.0162
LYS 2080.0172
GLN 2090.0140
PHE 2100.0143
ILE 2110.0118
ARG 2120.0115
ALA 2130.0088
PHE 2140.0069
ASP 2150.0344
GLY 2160.0306
PHE 2170.0097
LYS 2180.0106
VAL 2190.0103
LEU 2200.0099
GLY 2210.0099
LEU 2220.0105
PRO 2230.0111
TYR 2240.0102
LYS 2250.0075
GLN 2260.0036
GLY 2270.0213
GLU 2280.0265
ASP 2290.0088
LYS 2300.0173
ARG 2310.0100
GLN 2320.0119
PHE 2330.0104
THR 2340.0106
MET 2350.0078
TYR 2360.0065
PHE 2370.0089
PHE 2380.0089
LEU 2390.0150
PRO 2400.0144
ASN 2410.0236
ALA 2420.0172
LYS 2430.0128
ASP 2440.0169
GLY 2450.0160
LEU 2460.0160
ALA 2470.0186
ALA 2480.0162
LEU 2490.0144
VAL 2500.0156
GLU 2510.0148
LYS 2520.0137
VAL 2530.0128
ALA 2540.0117
SER 2550.0110
GLU 2560.0143
SER 2570.0135
GLU 2580.0208
LEU 2590.0173
LEU 2600.0170
GLN 2610.0185
HIS 2620.0194
LYS 2630.0125
LEU 2640.0138
PRO 2650.0161
PHE 2660.0214
GLY 2670.0230
LYS 2680.0205
VAL 2690.0133
GLU 2700.0192
VAL 2710.0166
GLY 2720.0208
ASP 2730.0163
PHE 2740.0150
ARG 2750.0142
ILE 2760.0164
PRO 2770.0190
LYS 2780.0211
PHE 2790.0175
ASN 2800.0189
ILE 2810.0191
SER 2820.0204
PHE 2830.0204
GLY 2840.0191
LEU 2850.0187
GLU 2860.0140
THR 2870.0141
SER 2880.0109
ASP 2890.0125
MET 2900.0143
LEU 2910.0176
LYS 2920.0155
GLU 2930.0177
LEU 2940.0215
GLY 2950.0234
VAL 2960.0203
VAL 2970.0171
LEU 2980.0126
PRO 2990.0091
PHE 3000.0065
SER 3010.0091
GLY 3020.0091
GLY 3030.0070
GLY 3040.0046
LEU 3050.0073
THR 3060.0083
LYS 3070.0096
MET 3080.0111
VAL 3090.0119
ASN 3100.0124
SER 3110.0207
SER 3120.0253
VAL 3130.0097
SER 3140.0130
GLN 3150.0252
ASN 3160.0235
LEU 3170.0099
CYS 3180.0096
VAL 3190.0057
SER 3200.0059
ASN 3210.0052
ILE 3220.0078
PHE 3230.0095
HIS 3240.0132
LYS 3250.0169
SER 3260.0175
PHE 3270.0155
ILE 3280.0127
GLU 3290.0103
VAL 3300.0094
ASN 3310.0099
GLU 3320.0076
GLU 3330.0119
GLY 3340.0121
THR 3350.0224
GLU 3360.0150
ALA 3370.0501
ALA 3380.0584
ALA 3390.0295
ALA 3400.0351
THR 3410.0337
ALA 3420.0336
ALA 3430.0834
THR 3440.0296
ILE 3450.0266
LEU 3460.0400
LEU 3470.0286
ARG 3480.0296
SER 3490.0817
ALA 3500.1014
MET 3510.0154
SER 3520.0128
ILE 3530.0217
PRO 3540.0229
PRO 3550.0160
ARG 3560.0186
LEU 3570.0177
ASP 3580.0189
PHE 3590.0169
VAL 3600.0198
ALA 3610.0179
ASP 3620.0111
HIS 3630.0109
PRO 3640.0127
PHE 3650.0132
LEU 3660.0110
PHE 3670.0088
MET 3680.0057
ILE 3690.0050
ARG 3700.0051
GLU 3710.0080
ASP 3720.0100
LEU 3730.0106
THR 3740.0068
GLY 3750.0061
THR 3760.0048
ILE 3770.0042
ILE 3780.0056
PHE 3790.0075
VAL 3800.0075
GLY 3810.0141
LEU 3820.0122
VAL 3830.0149
LEU 3840.0106
ASN 3850.0150
PRO 3860.0206
LEU 3870.0249
ALA 3880.0238
GLY 3890.0251

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.