CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MADHURJA 389 AA truncatula medicago single  ***

<R2> analysis for 260222215516854067

---  normal mode 63  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0641
MET 10.0508
ASP 20.0375
LEU 30.0166
ARG 40.0115
GLU 50.0257
SER 60.0139
ILE 70.0088
ALA 80.0157
ASN 90.0149
GLN 100.0083
THR 110.0075
ASN 120.0064
VAL 130.0047
SER 140.0045
LEU 150.0037
SER 160.0085
VAL 170.0105
ALA 180.0088
LYS 190.0119
HIS 200.0179
LEU 210.0130
PHE 220.0095
SER 230.0101
LYS 240.0152
GLU 250.0122
SER 260.0179
ASP 270.0203
ASN 280.0191
ASN 290.0144
ILE 300.0121
VAL 310.0121
PHE 320.0121
SER 330.0080
PRO 340.0078
LEU 350.0072
SER 360.0071
LEU 370.0095
GLN 380.0055
VAL 390.0083
VAL 400.0077
LEU 410.0085
SER 420.0107
ILE 430.0094
ILE 440.0050
ALA 450.0089
SER 460.0105
GLY 470.0050
SER 480.0086
GLU 490.0158
GLY 500.0268
PRO 510.0245
THR 520.0129
GLN 530.0132
GLN 540.0196
GLN 550.0091
LEU 560.0108
PHE 570.0200
ASN 580.0172
PHE 590.0125
LEU 600.0163
GLN 610.0251
PRO 620.0292
LYS 630.0353
SER 640.0267
THR 650.0205
ASP 660.0189
HIS 670.0183
LEU 680.0181
ASN 690.0158
TYR 700.0148
PHE 710.0135
ALA 720.0136
SER 730.0181
GLN 740.0197
LEU 750.0151
VAL 760.0144
SER 770.0192
VAL 780.0216
ILE 790.0145
LEU 800.0108
SER 810.0131
ASP 820.0079
ALA 830.0081
SER 840.0113
PRO 850.0272
ALA 860.0086
GLY 870.0115
GLY 880.0152
PRO 890.0160
LEU 900.0155
LEU 910.0146
SER 920.0144
PHE 930.0097
VAL 940.0081
ASP 950.0119
GLY 960.0128
VAL 970.0132
TRP 980.0136
VAL 990.0123
ASP 1000.0101
GLN 1010.0122
THR 1020.0100
LEU 1030.0138
SER 1040.0164
LEU 1050.0131
GLN 1060.0133
PRO 1070.0159
SER 1080.0143
PHE 1090.0059
GLN 1100.0061
GLN 1110.0130
ILE 1120.0163
VAL 1130.0173
SER 1140.0219
THR 1150.0212
HIS 1160.0213
PHE 1170.0199
LYS 1180.0220
ALA 1190.0199
ALA 1200.0200
LEU 1210.0178
SER 1220.0174
SER 1230.0157
VAL 1240.0149
ASP 1250.0117
PHE 1260.0047
GLN 1270.0050
ASN 1280.0174
LYS 1290.0129
ALA 1300.0052
VAL 1310.0103
GLU 1320.0097
VAL 1330.0122
THR 1340.0115
ASN 1350.0124
GLU 1360.0133
VAL 1370.0111
ASN 1380.0079
SER 1390.0157
TRP 1400.0118
ALA 1410.0048
GLU 1420.0130
LYS 1430.0150
GLU 1440.0055
THR 1450.0123
ASN 1460.0195
GLY 1470.0178
LEU 1480.0206
ILE 1490.0180
LYS 1500.0185
GLU 1510.0124
LEU 1520.0076
LEU 1530.0084
PRO 1540.0098
LEU 1550.0179
GLY 1560.0186
SER 1570.0100
VAL 1580.0094
ASN 1590.0080
ASN 1600.0081
ALA 1610.0097
THR 1620.0098
ARG 1630.0082
LEU 1640.0082
ILE 1650.0071
PHE 1660.0058
ALA 1670.0072
ASN 1680.0077
ALA 1690.0103
LEU 1700.0125
TYR 1710.0172
PHE 1720.0170
LYS 1730.0144
GLY 1740.0119
ALA 1750.0156
TRP 1760.0144
ASN 1770.0196
ASP 1780.0238
LYS 1790.0214
PHE 1800.0173
ASP 1810.0193
ALA 1820.0278
SER 1830.0278
LYS 1840.0222
THR 1850.0310
GLU 1860.0380
ASP 1870.0405
TYR 1880.0262
GLU 1890.0130
PHE 1900.0108
HIS 1910.0095
LEU 1920.0146
LEU 1930.0288
ASN 1940.0355
GLY 1950.0248
SER 1960.0186
PRO 1970.0057
VAL 1980.0067
LYS 1990.0224
VAL 2000.0289
PRO 2010.0340
PHE 2020.0273
MET 2030.0216
THR 2040.0146
SER 2050.0073
LYS 2060.0078
LYS 2070.0172
LYS 2080.0166
GLN 2090.0158
PHE 2100.0157
ILE 2110.0130
ARG 2120.0154
ALA 2130.0169
PHE 2140.0191
ASP 2150.0436
GLY 2160.0308
PHE 2170.0081
LYS 2180.0041
VAL 2190.0063
LEU 2200.0064
GLY 2210.0081
LEU 2220.0087
PRO 2230.0104
TYR 2240.0099
LYS 2250.0118
GLN 2260.0077
GLY 2270.0157
GLU 2280.0191
ASP 2290.0157
LYS 2300.0193
ARG 2310.0129
GLN 2320.0113
PHE 2330.0115
THR 2340.0108
MET 2350.0081
TYR 2360.0068
PHE 2370.0049
PHE 2380.0048
LEU 2390.0132
PRO 2400.0143
ASN 2410.0186
ALA 2420.0300
LYS 2430.0254
ASP 2440.0256
GLY 2450.0202
LEU 2460.0166
ALA 2470.0167
ALA 2480.0186
LEU 2490.0103
VAL 2500.0075
GLU 2510.0052
LYS 2520.0098
VAL 2530.0082
ALA 2540.0067
SER 2550.0095
GLU 2560.0146
SER 2570.0112
GLU 2580.0160
LEU 2590.0163
LEU 2600.0094
GLN 2610.0059
HIS 2620.0083
LYS 2630.0087
LEU 2640.0076
PRO 2650.0149
PHE 2660.0206
GLY 2670.0184
LYS 2680.0176
VAL 2690.0137
GLU 2700.0090
VAL 2710.0062
GLY 2720.0043
ASP 2730.0070
PHE 2740.0080
ARG 2750.0136
ILE 2760.0177
PRO 2770.0209
LYS 2780.0240
PHE 2790.0111
ASN 2800.0085
ILE 2810.0111
SER 2820.0142
PHE 2830.0145
GLY 2840.0154
LEU 2850.0186
GLU 2860.0180
THR 2870.0203
SER 2880.0203
ASP 2890.0291
MET 2900.0261
LEU 2910.0238
LYS 2920.0258
GLU 2930.0318
LEU 2940.0275
GLY 2950.0258
VAL 2960.0199
VAL 2970.0207
LEU 2980.0140
PRO 2990.0092
PHE 3000.0104
SER 3010.0080
GLY 3020.0077
GLY 3030.0038
GLY 3040.0071
LEU 3050.0091
THR 3060.0110
LYS 3070.0122
MET 3080.0078
VAL 3090.0136
ASN 3100.0227
SER 3110.0301
SER 3120.0155
VAL 3130.0178
SER 3140.0086
GLN 3150.0364
ASN 3160.0522
LEU 3170.0170
CYS 3180.0152
VAL 3190.0051
SER 3200.0046
ASN 3210.0066
ILE 3220.0087
PHE 3230.0092
HIS 3240.0109
LYS 3250.0132
SER 3260.0148
PHE 3270.0149
ILE 3280.0117
GLU 3290.0056
VAL 3300.0074
ASN 3310.0206
GLU 3320.0187
GLU 3330.0173
GLY 3340.0190
THR 3350.0151
GLU 3360.0258
ALA 3370.0345
ALA 3380.0641
ALA 3390.0151
ALA 3400.0134
THR 3410.0275
ALA 3420.0323
ALA 3430.0362
THR 3440.0338
ILE 3450.0137
LEU 3460.0119
LEU 3470.0105
ARG 3480.0175
SER 3490.0181
ALA 3500.0210
MET 3510.0128
SER 3520.0073
ILE 3530.0157
PRO 3540.0143
PRO 3550.0126
ARG 3560.0024
LEU 3570.0086
ASP 3580.0073
PHE 3590.0071
VAL 3600.0108
ALA 3610.0166
ASP 3620.0157
HIS 3630.0193
PRO 3640.0201
PHE 3650.0129
LEU 3660.0096
PHE 3670.0082
MET 3680.0077
ILE 3690.0116
ARG 3700.0113
GLU 3710.0128
ASP 3720.0124
LEU 3730.0124
THR 3740.0135
GLY 3750.0129
THR 3760.0106
ILE 3770.0079
ILE 3780.0104
PHE 3790.0113
VAL 3800.0090
GLY 3810.0094
LEU 3820.0108
VAL 3830.0182
LEU 3840.0179
ASN 3850.0163
PRO 3860.0183
LEU 3870.0144
ALA 3880.0174
GLY 3890.0126

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.