Should you encounter any unexpected behaviour,
please let us know. elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.
***  MADHURJA 389 AA truncatula medicago single  ***
This page gives a visualization of the normalized mean square displacement <R2>
of all C-alpha atoms in the protein that are associated to this mode (black bars).
The three components of the corresponding eigenvector are shown on the left (colored bars).
Here is the raw data for <R2> and
for the eigenvector (shift-click on the links for download).
X
Y
Z
residue
<R2>
<R2>max = 0.1334
MET 1
0.0092
ASP 2
0.0094
LEU 3
0.0083
ARG 4
0.0083
GLU 5
0.0079
SER 6
0.0069
ILE 7
0.0064
ALA 8
0.0064
ASN 9
0.0057
GLN 10
0.0048
THR 11
0.0048
ASN 12
0.0044
VAL 13
0.0035
SER 14
0.0031
LEU 15
0.0031
SER 16
0.0023
VAL 17
0.0014
ALA 18
0.0018
LYS 19
0.0015
HIS 20
0.0003
LEU 21
0.0010
PHE 22
0.0020
SER 23
0.0014
LYS 24
0.0021
GLU 25
0.0032
SER 26
0.0038
ASP 27
0.0049
ASN 28
0.0048
ASN 29
0.0046
ILE 30
0.0036
VAL 31
0.0034
PHE 32
0.0023
SER 33
0.0024
PRO 34
0.0022
LEU 35
0.0031
SER 36
0.0022
LEU 37
0.0016
GLN 38
0.0029
VAL 39
0.0031
VAL 40
0.0024
LEU 41
0.0033
SER 42
0.0043
ILE 43
0.0041
ILE 44
0.0044
ALA 45
0.0054
SER 46
0.0059
GLY 47
0.0059
SER 48
0.0066
GLU 49
0.0079
GLY 50
0.0086
PRO 51
0.0080
THR 52
0.0068
GLN 53
0.0068
GLN 54
0.0072
GLN 55
0.0061
LEU 56
0.0053
PHE 57
0.0062
ASN 58
0.0061
PHE 59
0.0047
LEU 60
0.0049
GLN 61
0.0062
PRO 62
0.0069
LYS 63
0.0082
SER 64
0.0082
THR 65
0.0074
ASP 66
0.0079
HIS 67
0.0077
LEU 68
0.0064
ASN 69
0.0061
TYR 70
0.0069
PHE 71
0.0064
ALA 72
0.0051
SER 73
0.0055
GLN 74
0.0063
LEU 75
0.0052
VAL 76
0.0045
SER 77
0.0055
VAL 78
0.0064
ILE 79
0.0057
LEU 80
0.0046
SER 81
0.0052
ASP 82
0.0057
ALA 83
0.0070
SER 84
0.0073
PRO 85
0.0078
ALA 86
0.0085
GLY 87
0.0088
GLY 88
0.0080
PRO 89
0.0070
LEU 90
0.0062
LEU 91
0.0050
SER 92
0.0039
PHE 93
0.0029
VAL 94
0.0017
ASP 95
0.0011
GLY 96
0.0012
VAL 97
0.0025
TRP 98
0.0032
VAL 99
0.0046
ASP 100
0.0057
GLN 101
0.0060
THR 102
0.0073
LEU 103
0.0069
SER 104
0.0069
LEU 105
0.0060
GLN 106
0.0068
PRO 107
0.0065
SER 108
0.0069
PHE 109
0.0059
GLN 110
0.0049
GLN 111
0.0055
ILE 112
0.0055
VAL 113
0.0041
SER 114
0.0039
THR 115
0.0051
HIS 116
0.0052
PHE 117
0.0039
LYS 118
0.0033
ALA 119
0.0023
ALA 120
0.0016
LEU 121
0.0026
SER 122
0.0029
SER 123
0.0043
VAL 124
0.0046
ASP 125
0.0059
PHE 126
0.0060
GLN 127
0.0074
ASN 128
0.0077
LYS 129
0.0066
ALA 130
0.0061
VAL 131
0.0062
GLU 132
0.0055
VAL 133
0.0045
THR 134
0.0044
ASN 135
0.0045
GLU 136
0.0034
VAL 137
0.0025
ASN 138
0.0032
SER 139
0.0032
TRP 140
0.0019
ALA 141
0.0021
GLU 142
0.0034
LYS 143
0.0030
GLU 144
0.0024
THR 145
0.0034
ASN 146
0.0044
GLY 147
0.0048
LEU 148
0.0047
ILE 149
0.0038
LYS 150
0.0043
GLU 151
0.0041
LEU 152
0.0028
LEU 153
0.0035
PRO 154
0.0047
LEU 155
0.0059
GLY 156
0.0063
SER 157
0.0051
VAL 158
0.0053
ASN 159
0.0066
ASN 160
0.0074
ALA 161
0.0074
THR 162
0.0060
ARG 163
0.0058
LEU 164
0.0046
ILE 165
0.0034
PHE 166
0.0021
ALA 167
0.0011
ASN 168
0.0004
ALA 169
0.0016
LEU 170
0.0028
TYR 171
0.0040
PHE 172
0.0051
LYS 173
0.0063
GLY 174
0.0072
ALA 175
0.0085
TRP 176
0.0089
ASN 177
0.0096
ASP 178
0.0101
LYS 179
0.0099
PHE 180
0.0101
ASP 181
0.0111
ALA 182
0.0108
SER 183
0.0119
LYS 184
0.0116
THR 185
0.0107
GLU 186
0.0110
ASP 187
0.0106
TYR 188
0.0102
GLU 189
0.0096
PHE 190
0.0084
HIS 191
0.0079
LEU 192
0.0071
LEU 193
0.0061
ASN 194
0.0069
GLY 195
0.0076
SER 196
0.0084
PRO 197
0.0090
VAL 198
0.0090
LYS 199
0.0097
VAL 200
0.0091
PRO 201
0.0095
PHE 202
0.0095
MET 203
0.0097
THR 204
0.0103
SER 205
0.0107
LYS 206
0.0114
LYS 207
0.0111
LYS 208
0.0109
GLN 209
0.0099
PHE 210
0.0092
ILE 211
0.0089
ARG 212
0.0085
ALA 213
0.0082
PHE 214
0.0073
ASP 215
0.0068
GLY 216
0.0062
PHE 217
0.0066
LYS 218
0.0074
VAL 219
0.0072
LEU 220
0.0079
GLY 221
0.0080
LEU 222
0.0083
PRO 223
0.0085
TYR 224
0.0082
LYS 225
0.0091
GLN 226
0.0090
GLY 227
0.0097
GLU 228
0.0096
ASP 229
0.0085
LYS 230
0.0088
ARG 231
0.0079
GLN 232
0.0081
PHE 233
0.0072
THR 234
0.0073
MET 235
0.0067
TYR 236
0.0066
PHE 237
0.0065
PHE 238
0.0060
LEU 239
0.0065
PRO 240
0.0061
ASN 241
0.0070
ALA 242
0.0066
LYS 243
0.0067
ASP 244
0.0057
GLY 245
0.0052
LEU 246
0.0046
ALA 247
0.0035
ALA 248
0.0036
LEU 249
0.0042
VAL 250
0.0032
GLU 251
0.0026
LYS 252
0.0037
VAL 253
0.0039
ALA 254
0.0029
SER 255
0.0033
GLU 256
0.0045
SER 257
0.0044
GLU 258
0.0055
LEU 259
0.0060
LEU 260
0.0057
GLN 261
0.0067
HIS 262
0.0074
LYS 263
0.0070
LEU 264
0.0074
PRO 265
0.0084
PHE 266
0.0093
GLY 267
0.0099
LYS 268
0.0103
VAL 269
0.0104
GLU 270
0.0106
VAL 271
0.0105
GLY 272
0.0107
ASP 273
0.0105
PHE 274
0.0099
ARG 275
0.0094
ILE 276
0.0085
PRO 277
0.0082
LYS 278
0.0080
PHE 279
0.0070
ASN 280
0.0063
ILE 281
0.0052
SER 282
0.0044
PHE 283
0.0035
GLY 284
0.0027
LEU 285
0.0022
GLU 286
0.0024
THR 287
0.0017
SER 288
0.0030
ASP 289
0.0032
MET 290
0.0019
LEU 291
0.0025
LYS 292
0.0036
GLU 293
0.0029
LEU 294
0.0026
GLY 295
0.0040
VAL 296
0.0042
VAL 297
0.0050
LEU 298
0.0060
PRO 299
0.0053
PHE 300
0.0053
SER 301
0.0066
GLY 302
0.0074
GLY 303
0.0078
GLY 304
0.0076
LEU 305
0.0067
THR 306
0.0078
LYS 307
0.0073
MET 308
0.0062
VAL 309
0.0069
ASN 310
0.0081
SER 311
0.0091
SER 312
0.0100
VAL 313
0.0090
SER 314
0.0083
GLN 315
0.0090
ASN 316
0.0084
LEU 317
0.0071
CYS 318
0.0061
VAL 319
0.0047
SER 320
0.0048
ASN 321
0.0035
ILE 322
0.0022
PHE 323
0.0017
HIS 324
0.0009
LYS 325
0.0021
SER 326
0.0029
PHE 327
0.0042
ILE 328
0.0052
GLU 329
0.0064
VAL 330
0.0072
ASN 331
0.0083
GLU 332
0.0093
GLU 333
0.0092
GLY 334
0.0096
THR 335
0.0109
GLU 336
0.0106
ALA 337
0.0106
ALA 338
0.0056
ALA 339
0.0128
ALA 340
0.0207
THR 341
0.0403
ALA 342
0.0748
ALA 343
0.0770
THR 344
0.1216
ILE 345
0.1252
LEU 346
0.1263
LEU 347
0.1334
ARG 348
0.1065
SER 349
0.0887
ALA 350
0.0515
MET 351
0.0324
SER 352
0.0046
ILE 353
0.0039
PRO 354
0.0112
PRO 355
0.0117
ARG 356
0.0107
LEU 357
0.0101
ASP 358
0.0098
PHE 359
0.0089
VAL 360
0.0088
ALA 361
0.0078
ASP 362
0.0082
HIS 363
0.0071
PRO 364
0.0060
PHE 365
0.0057
LEU 366
0.0049
PHE 367
0.0052
MET 368
0.0050
ILE 369
0.0054
ARG 370
0.0059
GLU 371
0.0066
ASP 372
0.0076
LEU 373
0.0083
THR 374
0.0074
GLY 375
0.0067
THR 376
0.0056
ILE 377
0.0047
ILE 378
0.0042
PHE 379
0.0038
VAL 380
0.0036
GLY 381
0.0038
LEU 382
0.0043
VAL 383
0.0054
LEU 384
0.0057
ASN 385
0.0066
PRO 386
0.0070
LEU 387
0.0075
ALA 388
0.0066
GLY 389
0.0061
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.