CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MADHURJA 389 AA truncatula medicago single  ***

<R2> analysis for 260222215516854067

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1516
MET 10.0077
ASP 20.0087
LEU 30.0078
ARG 40.0086
GLU 50.0081
SER 60.0066
ILE 70.0067
ALA 80.0075
ASN 90.0066
GLN 100.0054
THR 110.0061
ASN 120.0065
VAL 130.0053
SER 140.0048
LEU 150.0058
SER 160.0057
VAL 170.0045
ALA 180.0047
LYS 190.0057
HIS 200.0053
LEU 210.0042
PHE 220.0048
SER 230.0058
LYS 240.0051
GLU 250.0051
SER 260.0038
ASP 270.0034
ASN 280.0025
ASN 290.0027
ILE 300.0027
VAL 310.0027
PHE 320.0025
SER 330.0027
PRO 340.0032
LEU 350.0034
SER 360.0022
LEU 370.0016
GLN 380.0024
VAL 390.0019
VAL 400.0004
LEU 410.0015
SER 420.0014
ILE 430.0004
ILE 440.0014
ALA 450.0017
SER 460.0004
GLY 470.0017
SER 480.0025
GLU 490.0033
GLY 500.0047
PRO 510.0058
THR 520.0047
GLN 530.0036
GLN 540.0050
GLN 550.0053
LEU 560.0039
PHE 570.0044
ASN 580.0059
PHE 590.0052
LEU 600.0044
GLN 610.0056
PRO 620.0049
LYS 630.0055
SER 640.0040
THR 650.0025
ASP 660.0033
HIS 670.0044
LEU 680.0034
ASN 690.0030
TYR 700.0046
PHE 710.0048
ALA 720.0037
SER 730.0046
GLN 740.0058
LEU 750.0050
VAL 760.0046
SER 770.0060
VAL 780.0067
ILE 790.0059
LEU 800.0050
SER 810.0060
ASP 820.0064
ALA 830.0074
SER 840.0075
PRO 850.0086
ALA 860.0091
GLY 870.0087
GLY 880.0079
PRO 890.0067
LEU 900.0060
LEU 910.0053
SER 920.0046
PHE 930.0039
VAL 940.0035
ASP 950.0027
GLY 960.0033
VAL 970.0036
TRP 980.0051
VAL 990.0059
ASP 1000.0075
GLN 1010.0086
THR 1020.0092
LEU 1030.0076
SER 1040.0072
LEU 1050.0057
GLN 1060.0047
PRO 1070.0051
SER 1080.0035
PHE 1090.0030
GLN 1100.0044
GLN 1110.0045
ILE 1120.0031
VAL 1130.0032
SER 1140.0047
THR 1150.0050
HIS 1160.0040
PHE 1170.0033
LYS 1180.0045
ALA 1190.0038
ALA 1200.0048
LEU 1210.0051
SER 1220.0063
SER 1230.0073
VAL 1240.0081
ASP 1250.0094
PHE 1260.0086
GLN 1270.0102
ASN 1280.0112
LYS 1290.0102
ALA 1300.0087
VAL 1310.0087
GLU 1320.0090
VAL 1330.0077
THR 1340.0066
ASN 1350.0072
GLU 1360.0073
VAL 1370.0055
ASN 1380.0053
SER 1390.0066
TRP 1400.0061
ALA 1410.0046
GLU 1420.0054
LYS 1430.0066
GLU 1440.0059
THR 1450.0051
ASN 1460.0064
GLY 1470.0057
LEU 1480.0044
ILE 1490.0035
LYS 1500.0043
GLU 1510.0038
LEU 1520.0030
LEU 1530.0040
PRO 1540.0046
LEU 1550.0063
GLY 1560.0073
SER 1570.0060
VAL 1580.0068
ASN 1590.0086
ASN 1600.0097
ALA 1610.0091
THR 1620.0074
ARG 1630.0069
LEU 1640.0052
ILE 1650.0041
PHE 1660.0026
ALA 1670.0024
ASN 1680.0015
ALA 1690.0019
LEU 1700.0028
TYR 1710.0035
PHE 1720.0045
LYS 1730.0052
GLY 1740.0062
ALA 1750.0067
TRP 1760.0070
ASN 1770.0074
ASP 1780.0070
LYS 1790.0067
PHE 1800.0069
ASP 1810.0073
ALA 1820.0068
SER 1830.0072
LYS 1840.0072
THR 1850.0066
GLU 1860.0065
ASP 1870.0057
TYR 1880.0059
GLU 1890.0055
PHE 1900.0051
HIS 1910.0052
LEU 1920.0045
LEU 1930.0050
ASN 1940.0049
GLY 1950.0054
SER 1960.0046
PRO 1970.0047
VAL 1980.0041
LYS 1990.0045
VAL 2000.0047
PRO 2010.0054
PHE 2020.0061
MET 2030.0066
THR 2040.0072
SER 2050.0076
LYS 2060.0074
LYS 2070.0075
LYS 2080.0073
GLN 2090.0080
PHE 2100.0083
ILE 2110.0084
ARG 2120.0087
ALA 2130.0090
PHE 2140.0091
ASP 2150.0095
GLY 2160.0086
PHE 2170.0077
LYS 2180.0078
VAL 2190.0077
LEU 2200.0075
GLY 2210.0075
LEU 2220.0072
PRO 2230.0075
TYR 2240.0071
LYS 2250.0080
GLN 2260.0086
GLY 2270.0095
GLU 2280.0100
ASP 2290.0088
LYS 2300.0091
ARG 2310.0081
GLN 2320.0082
PHE 2330.0070
THR 2340.0071
MET 2350.0063
TYR 2360.0066
PHE 2370.0064
PHE 2380.0067
LEU 2390.0067
PRO 2400.0071
ASN 2410.0078
ALA 2420.0074
LYS 2430.0066
ASP 2440.0064
GLY 2450.0069
LEU 2460.0061
ALA 2470.0064
ALA 2480.0075
LEU 2490.0071
VAL 2500.0063
GLU 2510.0072
LYS 2520.0079
VAL 2530.0072
ALA 2540.0070
SER 2550.0080
GLU 2560.0084
SER 2570.0075
GLU 2580.0083
LEU 2590.0089
LEU 2600.0080
GLN 2610.0084
HIS 2620.0093
LYS 2630.0088
LEU 2640.0085
PRO 2650.0088
PHE 2660.0095
GLY 2670.0090
LYS 2680.0086
VAL 2690.0072
GLU 2700.0061
VAL 2710.0077
GLY 2720.0078
ASP 2730.0080
PHE 2740.0077
ARG 2750.0070
ILE 2760.0064
PRO 2770.0055
LYS 2780.0051
PHE 2790.0040
ASN 2800.0033
ILE 2810.0023
SER 2820.0014
PHE 2830.0007
GLY 2840.0007
LEU 2850.0020
GLU 2860.0030
THR 2870.0030
SER 2880.0041
ASP 2890.0050
MET 2900.0045
LEU 2910.0045
LYS 2920.0058
GLU 2930.0064
LEU 2940.0059
GLY 2950.0066
VAL 2960.0053
VAL 2970.0061
LEU 2980.0058
PRO 2990.0045
PHE 3000.0055
SER 3010.0070
GLY 3020.0069
GLY 3030.0062
GLY 3040.0048
LEU 3050.0039
THR 3060.0042
LYS 3070.0029
MET 3080.0035
VAL 3090.0051
ASN 3100.0060
SER 3110.0072
SER 3120.0080
VAL 3130.0080
SER 3140.0063
GLN 3150.0070
ASN 3160.0075
LEU 3170.0062
CYS 3180.0056
VAL 3190.0045
SER 3200.0055
ASN 3210.0042
ILE 3220.0026
PHE 3230.0021
HIS 3240.0006
LYS 3250.0006
SER 3260.0016
PHE 3270.0025
ILE 3280.0035
GLU 3290.0043
VAL 3300.0050
ASN 3310.0055
GLU 3320.0063
GLU 3330.0064
GLY 3340.0070
THR 3350.0075
GLU 3360.0058
ALA 3370.0084
ALA 3380.0103
ALA 3390.0239
ALA 3400.0570
THR 3410.0878
ALA 3420.1128
ALA 3430.1516
THR 3440.1315
ILE 3450.1156
LEU 3460.0886
LEU 3470.0713
ARG 3480.0820
SER 3490.0922
ALA 3500.0814
MET 3510.0719
SER 3520.0518
ILE 3530.0124
PRO 3540.0062
PRO 3550.0065
ARG 3560.0062
LEU 3570.0081
ASP 3580.0078
PHE 3590.0078
VAL 3600.0072
ALA 3610.0063
ASP 3620.0060
HIS 3630.0055
PRO 3640.0051
PHE 3650.0055
LEU 3660.0054
PHE 3670.0054
MET 3680.0054
ILE 3690.0055
ARG 3700.0063
GLU 3710.0069
ASP 3720.0080
LEU 3730.0086
THR 3740.0077
GLY 3750.0075
THR 3760.0062
ILE 3770.0055
ILE 3780.0046
PHE 3790.0041
VAL 3800.0043
GLY 3810.0040
LEU 3820.0042
VAL 3830.0041
LEU 3840.0040
ASN 3850.0035
PRO 3860.0037
LEU 3870.0029
ALA 3880.0020
GLY 3890.0017

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.