CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MADHURJA 389 AA truncatula medicago single  ***

<R2> analysis for 260222215518854084

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1641
MET 10.0082
ASP 20.0082
LEU 30.0054
ARG 40.0051
GLU 50.0054
SER 60.0037
ILE 70.0020
ALA 80.0030
ASN 90.0023
GLN 100.0011
THR 110.0012
ASN 120.0014
VAL 130.0003
SER 140.0006
LEU 150.0016
SER 160.0016
VAL 170.0015
ALA 180.0019
LYS 190.0031
HIS 200.0034
LEU 210.0034
PHE 220.0042
SER 230.0070
LYS 240.0082
GLU 250.0163
SER 260.0109
ASP 270.0084
ASN 280.0062
ASN 290.0023
ILE 300.0022
VAL 310.0011
PHE 320.0012
SER 330.0012
PRO 340.0011
LEU 350.0012
SER 360.0014
LEU 370.0018
GLN 380.0017
VAL 390.0022
VAL 400.0023
LEU 410.0025
SER 420.0029
ILE 430.0028
ILE 440.0025
ALA 450.0029
SER 460.0034
GLY 470.0021
SER 480.0020
GLU 490.0015
GLY 500.0017
PRO 510.0022
THR 520.0021
GLN 530.0025
GLN 540.0022
GLN 550.0022
LEU 560.0024
PHE 570.0027
ASN 580.0021
PHE 590.0016
LEU 600.0021
GLN 610.0032
PRO 620.0042
LYS 630.0062
SER 640.0066
THR 650.0052
ASP 660.0067
HIS 670.0059
LEU 680.0045
ASN 690.0047
TYR 700.0047
PHE 710.0034
ALA 720.0032
SER 730.0036
GLN 740.0018
LEU 750.0011
VAL 760.0021
SER 770.0031
VAL 780.0033
ILE 790.0031
LEU 800.0031
SER 810.0060
ASP 820.0093
ALA 830.0142
SER 840.0162
PRO 850.0255
ALA 860.0243
GLY 870.0183
GLY 880.0126
PRO 890.0068
LEU 900.0075
LEU 910.0041
SER 920.0043
PHE 930.0011
VAL 940.0014
ASP 950.0026
GLY 960.0023
VAL 970.0017
TRP 980.0017
VAL 990.0022
ASP 1000.0038
GLN 1010.0050
THR 1020.0053
LEU 1030.0038
SER 1040.0036
LEU 1050.0012
GLN 1060.0007
PRO 1070.0015
SER 1080.0029
PHE 1090.0023
GLN 1100.0029
GLN 1110.0051
ILE 1120.0048
VAL 1130.0037
SER 1140.0051
THR 1150.0061
HIS 1160.0050
PHE 1170.0040
LYS 1180.0044
ALA 1190.0036
ALA 1200.0033
LEU 1210.0021
SER 1220.0020
SER 1230.0028
VAL 1240.0040
ASP 1250.0057
PHE 1260.0056
GLN 1270.0070
ASN 1280.0083
LYS 1290.0072
ALA 1300.0065
VAL 1310.0071
GLU 1320.0062
VAL 1330.0043
THR 1340.0047
ASN 1350.0045
GLU 1360.0029
VAL 1370.0023
ASN 1380.0029
SER 1390.0028
TRP 1400.0025
ALA 1410.0021
GLU 1420.0022
LYS 1430.0026
GLU 1440.0019
THR 1450.0014
ASN 1460.0015
GLY 1470.0018
LEU 1480.0018
ILE 1490.0015
LYS 1500.0020
GLU 1510.0030
LEU 1520.0025
LEU 1530.0037
PRO 1540.0049
LEU 1550.0064
GLY 1560.0066
SER 1570.0053
VAL 1580.0048
ASN 1590.0065
ASN 1600.0066
ALA 1610.0054
THR 1620.0042
ARG 1630.0030
LEU 1640.0018
ILE 1650.0020
PHE 1660.0023
ALA 1670.0016
ASN 1680.0017
ALA 1690.0011
LEU 1700.0008
TYR 1710.0026
PHE 1720.0025
LYS 1730.0037
GLY 1740.0034
ALA 1750.0036
TRP 1760.0027
ASN 1770.0050
ASP 1780.0058
LYS 1790.0041
PHE 1800.0041
ASP 1810.0044
ALA 1820.0044
SER 1830.0043
LYS 1840.0049
THR 1850.0055
GLU 1860.0066
ASP 1870.0055
TYR 1880.0050
GLU 1890.0041
PHE 1900.0025
HIS 1910.0032
LEU 1920.0033
LEU 1930.0066
ASN 1940.0089
GLY 1950.0073
SER 1960.0043
PRO 1970.0024
VAL 1980.0018
LYS 1990.0041
VAL 2000.0038
PRO 2010.0044
PHE 2020.0043
MET 2030.0036
THR 2040.0040
SER 2050.0046
LYS 2060.0073
LYS 2070.0049
LYS 2080.0036
GLN 2090.0036
PHE 2100.0043
ILE 2110.0043
ARG 2120.0038
ALA 2130.0039
PHE 2140.0041
ASP 2150.0060
GLY 2160.0052
PHE 2170.0022
LYS 2180.0022
VAL 2190.0020
LEU 2200.0024
GLY 2210.0026
LEU 2220.0024
PRO 2230.0034
TYR 2240.0027
LYS 2250.0076
GLN 2260.0123
GLY 2270.0194
GLU 2280.0260
ASP 2290.0177
LYS 2300.0191
ARG 2310.0098
GLN 2320.0086
PHE 2330.0035
THR 2340.0027
MET 2350.0013
TYR 2360.0018
PHE 2370.0014
PHE 2380.0014
LEU 2390.0020
PRO 2400.0035
ASN 2410.0051
ALA 2420.0064
LYS 2430.0058
ASP 2440.0070
GLY 2450.0055
LEU 2460.0043
ALA 2470.0066
ALA 2480.0070
LEU 2490.0041
VAL 2500.0038
GLU 2510.0051
LYS 2520.0050
VAL 2530.0034
ALA 2540.0035
SER 2550.0044
GLU 2560.0040
SER 2570.0026
GLU 2580.0028
LEU 2590.0034
LEU 2600.0026
GLN 2610.0019
HIS 2620.0036
LYS 2630.0028
LEU 2640.0021
PRO 2650.0039
PHE 2660.0058
GLY 2670.0072
LYS 2680.0044
VAL 2690.0063
GLU 2700.0049
VAL 2710.0037
GLY 2720.0075
ASP 2730.0015
PHE 2740.0025
ARG 2750.0039
ILE 2760.0034
PRO 2770.0029
LYS 2780.0026
PHE 2790.0013
ASN 2800.0011
ILE 2810.0006
SER 2820.0008
PHE 2830.0014
GLY 2840.0017
LEU 2850.0016
GLU 2860.0018
THR 2870.0018
SER 2880.0021
ASP 2890.0027
MET 2900.0025
LEU 2910.0020
LYS 2920.0021
GLU 2930.0022
LEU 2940.0012
GLY 2950.0016
VAL 2960.0020
VAL 2970.0022
LEU 2980.0022
PRO 2990.0021
PHE 3000.0021
SER 3010.0017
GLY 3020.0012
GLY 3030.0010
GLY 3040.0012
LEU 3050.0008
THR 3060.0007
LYS 3070.0007
MET 3080.0007
VAL 3090.0016
ASN 3100.0031
SER 3110.0051
SER 3120.0065
VAL 3130.0044
SER 3140.0025
GLN 3150.0027
ASN 3160.0021
LEU 3170.0014
CYS 3180.0013
VAL 3190.0015
SER 3200.0019
ASN 3210.0019
ILE 3220.0021
PHE 3230.0016
HIS 3240.0018
LYS 3250.0011
SER 3260.0009
PHE 3270.0008
ILE 3280.0006
GLU 3290.0012
VAL 3300.0011
ASN 3310.0021
GLU 3320.0026
GLU 3330.0019
GLY 3340.0014
THR 3350.0036
GLU 3360.0080
ALA 3370.0182
ALA 3380.0346
ALA 3390.0246
ALA 3400.1527
THR 3410.0741
ALA 3420.0575
ALA 3430.0962
THR 3440.0403
ILE 3450.0486
LEU 3460.0770
LEU 3470.0492
ARG 3480.0504
SER 3490.0979
ALA 3500.1641
MET 3510.0355
SER 3520.0330
ILE 3530.0468
PRO 3540.0537
PRO 3550.0431
ARG 3560.0260
LEU 3570.0086
ASP 3580.0049
PHE 3590.0037
VAL 3600.0039
ALA 3610.0032
ASP 3620.0032
HIS 3630.0025
PRO 3640.0024
PHE 3650.0017
LEU 3660.0015
PHE 3670.0011
MET 3680.0010
ILE 3690.0010
ARG 3700.0019
GLU 3710.0039
ASP 3720.0060
LEU 3730.0100
THR 3740.0054
GLY 3750.0036
THR 3760.0020
ILE 3770.0013
ILE 3780.0010
PHE 3790.0008
VAL 3800.0008
GLY 3810.0013
LEU 3820.0016
VAL 3830.0014
LEU 3840.0025
ASN 3850.0013
PRO 3860.0013
LEU 3870.0025
ALA 3880.0030
GLY 3890.0017

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.