CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  MADHURJA 389 AA truncatula medicago single  ***

<R2> analysis for 260222215518854084

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1412
MET 10.0096
ASP 20.0101
LEU 30.0051
ARG 40.0060
GLU 50.0069
SER 60.0037
ILE 70.0013
ALA 80.0034
ASN 90.0044
GLN 100.0027
THR 110.0021
ASN 120.0034
VAL 130.0033
SER 140.0017
LEU 150.0036
SER 160.0035
VAL 170.0013
ALA 180.0033
LYS 190.0062
HIS 200.0036
LEU 210.0064
PHE 220.0087
SER 230.0169
LYS 240.0177
GLU 250.0493
SER 260.0335
ASP 270.0255
ASN 280.0222
ASN 290.0117
ILE 300.0106
VAL 310.0052
PHE 320.0042
SER 330.0038
PRO 340.0039
LEU 350.0065
SER 360.0067
LEU 370.0048
GLN 380.0045
VAL 390.0061
VAL 400.0063
LEU 410.0041
SER 420.0030
ILE 430.0033
ILE 440.0032
ALA 450.0034
SER 460.0021
GLY 470.0026
SER 480.0048
GLU 490.0084
GLY 500.0117
PRO 510.0118
THR 520.0089
GLN 530.0077
GLN 540.0099
GLN 550.0091
LEU 560.0072
PHE 570.0076
ASN 580.0092
PHE 590.0070
LEU 600.0055
GLN 610.0071
PRO 620.0066
LYS 630.0085
SER 640.0071
THR 650.0044
ASP 660.0036
HIS 670.0031
LEU 680.0030
ASN 690.0022
TYR 700.0016
PHE 710.0032
ALA 720.0058
SER 730.0057
GLN 740.0063
LEU 750.0097
VAL 760.0101
SER 770.0093
VAL 780.0134
ILE 790.0126
LEU 800.0122
SER 810.0198
ASP 820.0193
ALA 830.0270
SER 840.0277
PRO 850.0520
ALA 860.0511
GLY 870.0385
GLY 880.0223
PRO 890.0112
LEU 900.0100
LEU 910.0083
SER 920.0083
PHE 930.0077
VAL 940.0077
ASP 950.0078
GLY 960.0075
VAL 970.0064
TRP 980.0053
VAL 990.0043
ASP 1000.0034
GLN 1010.0033
THR 1020.0034
LEU 1030.0035
SER 1040.0045
LEU 1050.0050
GLN 1060.0055
PRO 1070.0096
SER 1080.0080
PHE 1090.0045
GLN 1100.0069
GLN 1110.0077
ILE 1120.0038
VAL 1130.0046
SER 1140.0071
THR 1150.0058
HIS 1160.0040
PHE 1170.0053
LYS 1180.0071
ALA 1190.0073
ALA 1200.0072
LEU 1210.0066
SER 1220.0056
SER 1230.0039
VAL 1240.0036
ASP 1250.0077
PHE 1260.0071
GLN 1270.0119
ASN 1280.0157
LYS 1290.0136
ALA 1300.0102
VAL 1310.0112
GLU 1320.0106
VAL 1330.0054
THR 1340.0051
ASN 1350.0061
GLU 1360.0045
VAL 1370.0025
ASN 1380.0022
SER 1390.0026
TRP 1400.0023
ALA 1410.0023
GLU 1420.0011
LYS 1430.0040
GLU 1440.0045
THR 1450.0024
ASN 1460.0042
GLY 1470.0034
LEU 1480.0022
ILE 1490.0021
LYS 1500.0030
GLU 1510.0030
LEU 1520.0040
LEU 1530.0041
PRO 1540.0059
LEU 1550.0092
GLY 1560.0114
SER 1570.0070
VAL 1580.0072
ASN 1590.0121
ASN 1600.0137
ALA 1610.0131
THR 1620.0075
ARG 1630.0048
LEU 1640.0052
ILE 1650.0057
PHE 1660.0065
ALA 1670.0070
ASN 1680.0071
ALA 1690.0063
LEU 1700.0053
TYR 1710.0037
PHE 1720.0024
LYS 1730.0052
GLY 1740.0065
ALA 1750.0098
TRP 1760.0078
ASN 1770.0079
ASP 1780.0078
LYS 1790.0064
PHE 1800.0041
ASP 1810.0066
ALA 1820.0113
SER 1830.0149
LYS 1840.0140
THR 1850.0151
GLU 1860.0196
ASP 1870.0208
TYR 1880.0177
GLU 1890.0165
PHE 1900.0091
HIS 1910.0066
LEU 1920.0024
LEU 1930.0126
ASN 1940.0156
GLY 1950.0141
SER 1960.0064
PRO 1970.0112
VAL 1980.0142
LYS 1990.0208
VAL 2000.0172
PRO 2010.0161
PHE 2020.0118
MET 2030.0069
THR 2040.0068
SER 2050.0122
LYS 2060.0165
LYS 2070.0144
LYS 2080.0179
GLN 2090.0123
PHE 2100.0118
ILE 2110.0101
ARG 2120.0090
ALA 2130.0050
PHE 2140.0058
ASP 2150.0080
GLY 2160.0091
PHE 2170.0043
LYS 2180.0027
VAL 2190.0069
LEU 2200.0076
GLY 2210.0080
LEU 2220.0063
PRO 2230.0042
TYR 2240.0060
LYS 2250.0182
GLN 2260.0200
GLY 2270.0440
GLU 2280.0540
ASP 2290.0355
LYS 2300.0357
ARG 2310.0160
GLN 2320.0074
PHE 2330.0040
THR 2340.0028
MET 2350.0055
TYR 2360.0069
PHE 2370.0061
PHE 2380.0051
LEU 2390.0017
PRO 2400.0057
ASN 2410.0099
ALA 2420.0159
LYS 2430.0131
ASP 2440.0167
GLY 2450.0118
LEU 2460.0098
ALA 2470.0152
ALA 2480.0129
LEU 2490.0089
VAL 2500.0108
GLU 2510.0130
LYS 2520.0126
VAL 2530.0122
ALA 2540.0133
SER 2550.0182
GLU 2560.0172
SER 2570.0170
GLU 2580.0216
LEU 2590.0189
LEU 2600.0158
GLN 2610.0164
HIS 2620.0203
LYS 2630.0141
LEU 2640.0144
PRO 2650.0144
PHE 2660.0192
GLY 2670.0191
LYS 2680.0175
VAL 2690.0155
GLU 2700.0185
VAL 2710.0138
GLY 2720.0157
ASP 2730.0112
PHE 2740.0094
ARG 2750.0078
ILE 2760.0067
PRO 2770.0080
LYS 2780.0103
PHE 2790.0089
ASN 2800.0093
ILE 2810.0085
SER 2820.0079
PHE 2830.0063
GLY 2840.0056
LEU 2850.0053
GLU 2860.0053
THR 2870.0047
SER 2880.0045
ASP 2890.0076
MET 2900.0050
LEU 2910.0052
LYS 2920.0082
GLU 2930.0075
LEU 2940.0061
GLY 2950.0082
VAL 2960.0075
VAL 2970.0099
LEU 2980.0095
PRO 2990.0056
PHE 3000.0075
SER 3010.0119
GLY 3020.0107
GLY 3030.0085
GLY 3040.0079
LEU 3050.0042
THR 3060.0058
LYS 3070.0046
MET 3080.0024
VAL 3090.0032
ASN 3100.0045
SER 3110.0045
SER 3120.0086
VAL 3130.0061
SER 3140.0057
GLN 3150.0117
ASN 3160.0117
LEU 3170.0046
CYS 3180.0043
VAL 3190.0051
SER 3200.0058
ASN 3210.0057
ILE 3220.0059
PHE 3230.0063
HIS 3240.0058
LYS 3250.0054
SER 3260.0041
PHE 3270.0054
ILE 3280.0049
GLU 3290.0055
VAL 3300.0060
ASN 3310.0067
GLU 3320.0049
GLU 3330.0031
GLY 3340.0103
THR 3350.0286
GLU 3360.0330
ALA 3370.0480
ALA 3380.0596
ALA 3390.1412
ALA 3400.1274
THR 3410.0327
ALA 3420.0673
ALA 3430.0986
THR 3440.0539
ILE 3450.0566
LEU 3460.0567
LEU 3470.0407
ARG 3480.0362
SER 3490.0208
ALA 3500.0608
MET 3510.0081
SER 3520.0045
ILE 3530.0244
PRO 3540.0157
PRO 3550.0195
ARG 3560.0182
LEU 3570.0098
ASP 3580.0102
PHE 3590.0052
VAL 3600.0068
ALA 3610.0034
ASP 3620.0068
HIS 3630.0032
PRO 3640.0035
PHE 3650.0037
LEU 3660.0057
PHE 3670.0062
MET 3680.0054
ILE 3690.0035
ARG 3700.0035
GLU 3710.0060
ASP 3720.0048
LEU 3730.0088
THR 3740.0081
GLY 3750.0052
THR 3760.0055
ILE 3770.0037
ILE 3780.0042
PHE 3790.0030
VAL 3800.0036
GLY 3810.0073
LEU 3820.0072
VAL 3830.0076
LEU 3840.0078
ASN 3850.0094
PRO 3860.0112
LEU 3870.0166
ALA 3880.0183
GLY 3890.0144

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.